Oreochromis niloticus (Nile tilapia): 100690905
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Entry
100690905 CDS
T06104
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100690905 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100690905 (smarcd2)
03036 Chromosome and associated proteins [BR:
onl03036
]
100690905 (smarcd2)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100690905 (smarcd2)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100690905 (smarcd2)
PBAF complex
100690905 (smarcd2)
GBAF(ncBAF) complex
100690905 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
100690905
NCBI-ProteinID:
XP_003441914
Ensembl:
ENSONIG00000016465
UniProt:
I3KHZ3
LinkDB
All DBs
Position
LG8:complement(15807246..15818145)
Genome browser
AA seq
501 aa
AA seq
DB search
MASRGSFTGPPMNSSMSPMNVGHAAGMRMQGMPQPPGGYPRSMSSVPQYPQRPGMPSSRV
GGPMGSMGGQLPGPSYGSSSIPMRAGMGPPSMDASRKRFLHQQQQQQEVLGGLRRGAKRR
KMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYI
SNTYTPSKPEGEEAEKVSSWELRVEGKLLEEAGKQKRKFSSFFKSLVIELDKELYGPDNH
LVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAS
IMQALWLYIKNNKLQDSHEKEYINCNRYFRQIFGCPRMRFSEIPMKLAGLLQHPDPIIIN
HVISVDPTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALEMKIHETIEYINQL
KTERDFMLSFSNNPQEFIKDWLKSQSRDLKLMTDVTGNPEEERRTEFYHEPWVPEAVGRY
VYSKVQQRRQELEQVLGIRLT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaggggaagcttcactggtcctccgatgaattcgagtatgagccccatgaat
gttgggcatgccgcgggcatgaggatgcaaggaatgccccagcctccggggggatatccc
agaagcatgagcagcgttccccaatacccccagcgccccgggatgccatccagcagagtg
gggggccccatggggtcaatggggggtcagctgcctggtccctcttatggtagcagtagc
attcccatgcgggcaggcatgggacccccgagcatggacgcctctaggaaacggtttctt
catcagcaacagcaacaacaagaggtgctgggaggcctcagacgaggagcaaaaaggcgc
aagatggctgacaaggttctgccacagaggatccgagatctggtcccggagtcccaggcc
tacatggacctcctggcctttgagaggaagctggaccagaccatcgctcgaaagcgtatg
gagattcaggaagccatcaaaaagcccattatgcaaaagcgcaagctcaggatctacatt
tccaacacgtacactcccagcaaacccgagggtgaggaggcggagaaggtgtcctcctgg
gagctgagagttgagggcaaactcctggaggaagctggcaagcagaagaggaagttttca
tctttcttcaaaagcctggtgattgagcttgataaggagctctacgggcctgacaaccac
ttagtagagtggcacagaatgcccaccactcaggagacggatggtttccaggtcaaaagg
ccaggagacgtgaatgttaaatgcacccttctgctcatgctcgaccaccagccccctcag
tacaaactggatccacggttggctcgccttctgggtgtacacacacagacacgagccagc
atcatgcaagctctctggctttacatcaagaacaacaagctgcaggacagtcatgagaag
gagtacatcaactgcaaccgctatttcagacagatcttcggctgtccacgcatgaggttc
tctgagattcccatgaaactggcgggcctgctgcagcaccctgaccccattattatcaat
cacgtcattagcgtggatcccaccgatcagaagaagactgcatgctacgacatcgacgtg
gaagtggacgacccacttaagggccaaatgaacagcttcctgtcttctacaaccaaccag
caagaaatcgctgcccttgagatgaagattcatgaaaccattgagtacattaaccagctg
aagaccgaaagagatttcatgctgagcttcagcaataatccacaggagttcatcaaggac
tggctgaagtctcagtccagggatctgaagttgatgacagatgtgactggaaacccagaa
gaggagaggaggaccgagttctaccatgagccctgggtgccagaggcagtgggcagatat
gtttactccaaagtgcagcagagaagacaagagctggagcaggtgttgggtatccgactc
acctaa
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integrated database retrieval system
