Oreochromis niloticus (Nile tilapia): 100690956
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Entry
100690956 CDS
T06104
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X6
KO
K16474
intraflagellar transport protein 88
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
onl03037
]
100690956 (ift88)
Cilium and associated proteins [BR:
onl03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
100690956 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_6
TPR_14
TPR_7
TPR_16
TPR_11
ANAPC3
TPR_17
TPR_9
TPR_CcmH_CycH
TPR_10
ARM_TT21_5th
ARM_TT21_4th
DUF2225
TPR-S
TPR_MalT
HAT_PRP39_C
TPR_15
ARM_TT21_C
HEAT_Nup120
SHPRH_helical-1st
RPN7
Consortin_N
NatA_aux_su
MIT
Motif
Other DBs
NCBI-GeneID:
100690956
NCBI-ProteinID:
XP_003456633
Ensembl:
ENSONIG00000015723
LinkDB
All DBs
Position
LG16:27529637..27551944
Genome browser
AA seq
824 aa
AA seq
DB search
MEHVHLAVEEDDLYSGYNDYNPTFDSEELENDVGFQQAVRTSHGRRPPMTAKFPGTPIGP
RSLATSFGARLHMASSMGRPMTGAVQDGSARPMTAVRAAGYTSALSRGSAFDPLGQSRGP
APALEAKNEDTPEEKIKILEKKVNDLIEESCMAQSMGALQVALEKAKEAGRKERALVRQR
EQSGSADHINLDLTYSVLLNLANQYTNNEMYPEALNSYQIIVKNKMFSNAGRLKVNMANI
YFKQKNYPKAIKFYRMALDQITNAHKEMRIKIMQNIGVVFICMGQYTDAITSFEHIMSES
PNIKTGFNLILCYYAIGDRERMKKAFQKLISVPLGIDDEDKYIPSNEDTSSNMVIEAIKN
DKLHQMERDLKTLAEKYIMTAAKLIAPAIETLFATGFDWCVDMVKSSQYVELANDLEINK
AITYLRQKDFNQAVETLKAFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYADLAMNADR
YNPAALINKGNTVFVKQEYEKAAEFYKEALRNDSSCTEGLYNLGLTYKRLNRLEEALDCF
LKLHAILRNSSQVMYQLASLYELLENPEQAIEWLMQVISVTPTDAQALAKLGELHDGEGD
KSQAFQYYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLMVA
SCYRRSGNSQKALETYKEIHRKFPENVECLRFLVRLCTDMQLKEVQDYATKLKKVEKMKE
IREQRIKSGREGSARSRREGRESSAGSADSGRSSSSTKGERLSAKMRSLPGSNEPYEASS
PKELDASYVDPLGPQMDRPKTGVKKRVEDDDFADEELGDDLLPE
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgtgcatctggctgtagaggaggacgacctttactcgggttacaatgattat
aatccgacatttgactcggaggagctggagaatgatgtgggcttccagcaagcagtgagg
acaagtcatggaagaagacccccgatgactgccaagtttcctggcactcccattggacct
cgatctttagctacttcttttggcgctcggcttcatatggcctcttcaatgggacgaccc
atgactggagctgtacaggatgggtcagcccgaccaatgactgccgtcagagcagcaggt
tacacctccgccctgagtcggggctcagcctttgaccctctgggccagtccagaggtcct
gcacctgcactcgaagcaaagaatgaggatacgcctgaggagaagatcaaaatcttggag
aagaaagtgaatgacctgatagaggagagctgcatggcacagagcatgggagccttacaa
gtggcccttgaaaaagccaaagaggcagggcggaaggagcgagccctggtcagacagagg
gaacagtctggcagtgcagaccatataaatttagacctcacctactctgttttgctcaac
cttgccaaccaatacacaaacaatgaaatgtacccagaggccctgaacagctaccagatc
attgtgaagaataaaatgttcagtaacgcaggccgcctgaaagtcaacatggccaacatc
tactttaaacagaagaactatcctaaagccatcaagttctaccgaatggcgctggatcag
ataacaaatgcccacaaagaaatgaggatcaagatcatgcagaatatcggtgtagtgttt
atctgcatgggccagtacacagatgccattacgtctttcgagcacatcatgagcgagagt
ccaaatatcaagacaggcttcaaccttatcttgtgctactatgctatcggtgacagagag
aggatgaagaaggcctttcagaagctcatctctgttcctctgggcattgatgatgaagac
aaatacatcccttccaatgaagacaccagctccaatatggtcattgaggccattaaaaat
gacaaacttcaccagatggagagagatctaaaaaccctggctgagaaatacatcatgaca
gcagccaagctcattgccccagcgattgagactttgtttgctactggatttgactggtgt
gtcgacatggtgaagagttctcagtatgtcgagcttgccaatgatttagagattaacaaa
gccatcacctacctcagacagaaggacttcaaccaggcagtggaaacattgaaggcattt
gagaagaaggacagcagagtgaagagcgctgcagccactaacctctctttcctctatttt
ctggagaaagactacgaccaggctgaccgatatgctgaccttgctatgaatgctgatcgt
tacaacccagcagcacttatcaacaagggcaacacggtgtttgtcaaacaggaatatgaa
aaggctgcagagttctacaaagaagcactgaggaatgattcctcgtgcaccgaaggcctt
tacaacctgggtctgacttataaaagactgaatcgtctagaggaggctctggactgcttc
ctgaagctccatgccattctcaggaatagttcccaagtcatgtaccagctggccagcctc
tatgagcttctggaaaatcctgaacaagcaatcgaatggctaatgcaggtcatcagtgta
actcccacagatgcccaggcactggctaagctgggagaactgcatgatggcgagggggac
aaatcccaggctttccagtactattatgagtcctttaggtactttccttccaacatcgat
gtgattgagtggctcggagcttactacatcgagacacagttctgtgagaaagccattcag
tactttgaaagagccacgcttatacaaccaacccaggtgaagtggcagctaatggtggca
agctgctacagacgaagtggaaactcccagaaagcactggaaacttataaagaaatccac
cgaaagtttccagaaaatgtggaatgcttgcgtttcctggtgcggctgtgcacagatatg
caattgaaggaagtccaagactacgccaccaaactgaagaaggtagagaagatgaaggaa
atcagagagcagaggataaaatcgggacgggaaggcagcgcgagaagtcgaagagaaggc
agagagagcagtgcagggagcgctgacagtggtcgcagcagcagcagcactaaaggagag
cgtctgagcgccaaaatgaggtcacttcctggttcaaatgagccttatgaagccagcagt
ccaaaagaactggatgcgtcctacgtggacccactggggcctcagatggacagaccaaag
acgggagtcaagaagcgtgtggaggatgacgactttgcagatgaagagctaggagacgac
ctgctgccagagtag
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