Oreochromis niloticus (Nile tilapia): 100690967
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Entry
100690967 CDS
T06104
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X2
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04145
Phagosome
onl04814
Motor proteins
onl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100690967
09142 Cell motility
04814 Motor proteins
100690967
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100690967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100690967
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
onl04812
]
100690967
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
100690967
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
100690967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
ANAPC4_WD40
Nbas_N
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
100690967
NCBI-ProteinID:
XP_003438042
Ensembl:
ENSONIG00000010393
UniProt:
A0A669B0E0
LinkDB
All DBs
Position
LG18:12095913..12104279
Genome browser
AA seq
634 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGDSKRGGEATGGSSAGHEDSDLER
KRREAEALLQSVGITPDVPHVPAPMSPSNKSVGSDAGSQDSGDGNAGPRTLHWDPDPSTL
QLHSDSELMGRGAVRLGMSKVTQVDFLPKEMVSYSKETQTPTEAMTHTDQKADEEEDEEI
TAPPPAEDNQEDNDEQGEQQQEDAPKELTEEEKLQLLHSDDFLSFFERGSRIVERALAEQ
VDVCFDYSGRDLEDKEGDLQAGAKLVLNRQFADERWTKNRVVTCLDWSPQYPELLVASYN
NNEDAPHEPDGVALVWNMKYKKPTPEYIFHCQSEVMSAGFAKFHPNLVVGGTYSGQIVLW
DNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLISISTDGKMCSWSLDMLSQPQD
SLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGSKAGITEVFEGHHGPVT
GLSCHSAGGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSCDYVYDAMWSPTHPALF
ACVDLAGRLDLWNLNNDTEVPTASVYVDGAPALNRVRWSHTGKEIATGDSEGQVQVYDVG
EQICVPKADEWTRFVRTLAEINENRDEAEELANA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagtgagctcaaggctgagctggaaaggaagaaacaacggatcgcccag
attcgagaggagaagaaaagaaaagaggaagagaagaaaaagaaggatggagactctaaa
cgtggaggtgaggcaacgggtggatcttcagccggccatgaagattcagacctggagagg
aagaggagggaggctgaggctctgctgcagagcgttggcataacccccgacgtaccccac
gtccctgccccaatgtctccctccaacaaatctgtcggcagcgatgcaggaagtcaagat
tctggcgatggaaacgcaggaccaaggacattgcattgggatcctgacccctctactctg
caactccactccgactctgagctgatgggacgtggagccgtgaggctaggcatgtccaaa
gtgacccaggtggactttctgccgaaggaaatggtgtcctactccaaagaaacgcagaca
cccacggaggcaatgacacacaccgatcaaaaagcagatgaggaagaggatgaggagata
actgctcctccaccagcagaggacaaccaggaggacaacgatgagcagggtgaacagcag
caggaagacgcccccaaggagctgaccgaggaagagaagctgcagttgcttcactcggat
gatttcttatcattttttgagcgcggcagcagaattgtggagagagctctggctgagcag
gtggatgtctgcttcgactatagcggcagagatctagaggacaaggagggtgacttgcag
gctggggcaaagctggttctgaatagacagtttgcagatgagcgctggactaaaaacaga
gtggtcacctgtctcgactggtctcctcagtatccagagctgctggtggcctcatataac
aacaatgaggacgctccacatgagcctgatggtgtggcactggtctggaacatgaagtat
aagaagcccacccctgaatacatcttccactgccagtctgaagtgatgtcagccggcttt
gcaaagtttcaccccaaccttgtggtgggtgggacatactcgggacagatagtattatgg
gacaacaggagcaataagcgcacccctgtgcagaggactcccctgtctgcagctgcacac
acacacccagtctactgcgtgaatgtggtgggaacccaaaatgccaacaacctgatcagc
atttccactgatggcaagatgtgctcctggagcctggacatgctctcccagccacaggac
agtctggagctggtgttcaaacagagcaaagcggtggctgtcacctccatggcgtttcct
ctgggtgacgttaacaactttgtggtagggagcgaagacggctccgtctacaccgcctgt
cgccatggcagtaaggcaggcatcactgaagtgtttgaaggccaccatggtccggttact
ggactgagctgccacagtgctggaggacctgttgatttctctcacctcttcatctcgtcc
tcgtttgactggaccgtcaaactctggagcactaagagtacccgtccattatactctttt
gaggacagctgtgactacgtctacgatgcgatgtggtctccaacacaccctgccctgttt
gcttgtgtggacctagctggacgtctggacttgtggaacctcaacaatgataccgaagtt
ccaactgctagtgtgtatgtggatggggctccggcactgaaccgtgtcagatggtctcac
actggaaaggagattgccactggggactcagagggacaggttcaggtctacgatgtaggc
gagcaaatctgtgttcccaaagcagatgagtggacccgcttcgtcaggacgctggctgag
atcaatgaaaacagagatgaagctgaggaactggccaatgcatga
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