Oreochromis niloticus (Nile tilapia): 100690990
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Entry
100690990 CDS
T06104
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100690990 (ctr9)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
100690990 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_7
TPR_11
ARM_TT21_5th
TPR_6
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
100690990
NCBI-ProteinID:
XP_003442329
Ensembl:
ENSONIG00000006019
UniProt:
I3JFE0
LinkDB
All DBs
Position
LG1:20541780..20549890
Genome browser
AA seq
1158 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQLLKEQEERRNREVEEQKKLLEQRALYVEKTKNLLTFAEGSKEMPK
EKKKGSGGGGGRRKKGGDMDDFVNDESDEDLPLKKKKKRKASSSEQEEDEKGERKKKKRR
PAKGGEDDSDEEGTSRSKKQRKPKEGRKKIEKAQPERLPPSLKGKIKSKAIISSSESSSD
EDGLKIAEDRHQRDSGSGSDDEVGHRKRIASDSDSDGGRNRSGSEAGSPRRSAGSDDDES
GSDRPVKKRRVQRQSDSEQSDNESKRSRSGSDDESRAGSPAAASDRGSEAGSDNEGSPRR
SDNGSEQEASNNEDDDSD
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaggctctatcgagatccctttacgggacacagatgaggtcatcgagctcgac
ttcgaccaacttcctgaaggagatgaggtcatcagtatcttgaagcaggagcacacgcag
ctgcacatttggattgctctggcgttggagtactacaaacagggcaaaacagaggacttt
gtaaagcttttagaggcagcacgtattgatggaaacctcgactacagagaccacgaaaaa
gaccagatgacctgtctggacacactggcagcttactatgtccagcaagcacgtaaagag
aaaaacaaagatgccaagaaggagctcatcacacaggctacgctcctgtatactatggca
gacaagatcatcatgtatgatcagaaccatttgttgggaagagcctgtttctgcctgctg
gaaggagacaagatggaccaggctgatgctcagttccactttgtcctcaaccagtccacc
aataacatccctgctttgcttggtaaggcttgcatctccttcaataaaaaggattacaga
ggagcgctggcgtactacaaaaaggctctgcgtacaaaccccggctgcccagctgaggtg
aggctggggatgggccactgtttcgtcaagctcaacaaactggagaaggctcgtttggct
ttcggtcgagccctggagcttaactcaaagtgtgtgggagcgctcgttggtttggctgtt
ttagagctcaacaacaaagaggcagactccatcaagaacggagtgcagcttctttcgcgg
gcctacaccatcgaccccagcaaccccatggtactcaaccacctcgccaaccacttcttc
ttcaaaaaggactacagtaaagtgcagcatctcgctctgcacgctttccacaacacagaa
gttgaggccatgcaggctgagagctgctatcagttagctcgctcatttcacgtgcaggag
gactacgaccaagcgtttcagtattattaccaagccactcagtttgcctcgtccaccttt
gtgctgccgttcttcggcctggggcagatgtatgtgtatcgaagagacaaagaaaatgca
gcgcagtgctttgaaaaggttttaaaggcttaccccaacaactatgagactatgaaaatc
cttgggtctctctatgcaacgtctgacgatcaggaaaaaagagacattgcaaaagggcac
ttgaagaaagtaacagagcagtacccagatgatgtggaggcgtggattgagctggcacag
attctggagcagacagacatccaaggagcgctatccgcttacggcacagctacacgcatc
ctgcaggagaaggtgcaggctgacgttccccccgagattctcaacaacctgggggctctg
cacttcagactgggcaacctaggggaagccaagaaatattttctagcttctctggagcga
gccaaagccgaaggagagcatgacgagcattactacaatgccatttctgtcaccacctcc
tacaatctggcccgtctgtacgaggctatgtgtgaattccacgaagccgagaaactctac
aaaaacatcctcagagaacatcccaactatgtggattgttatttgcgtcttggagcgatg
gctcgggacaaaggaaacttctatgaagcctccgactggttcaaagaagctcttcagatt
aatcaggatcacccggatgcctggtccctgataggaaatcttcacttggccaaacaggag
tggggtccaggtcaaaagaagtttgaacgtattctcaagcagccgtccacgcagaacgac
acctactccatgctggctctgggtaacgtgtggttacagacgctgcaccagcccaccaga
gaccgtgaaaaggaaaagagacaccaagatcgagccctggcaatctacaagcaagtcctg
cgaaatgatgccaagaacctctacgccgccaatggcatcggtgccgtccttgcccacaag
ggctacttcagagaggcgcgagatgtttttgcgcaggtgagggaggccacagccgaaatc
agtgacgtgtggctaaatctggctcacatctacgtggagcagaagcagtacatcagcgcc
gtgcagatgtacgagaactgcctgaagaagttttacaaatatcagaacacagaggtgctg
ctttacctcgcacgtgcgctcttcaaatgtggcaaactgcaagagtgcaaacagatgctt
ctgaaggcccgtcacgtggcacccaatgacacagtgctgatgtttaatgtggccctggtg
cttcagagactggccacccttgtgcttaaagatgagaagagcaacttgaaggctgtgctc
agtgctgtcaaagagctggaactggctcacaggtacttcagctacctcagcaaggctgga
gacaagatgaggtttgacctcgctctcgctgcttccgaggccaggcagtgctctgacttg
ctgagtcaggctcagtaccatgtagctagagccagaaagcaggacgaggaggagaaggag
cttcgagccaaacaagagcaggagagagacctgctgcgccaacagctgttaaaggaacag
gaggaaaggaggaacagagaggtggaggagcagaagaagcttttggagcagagagctttg
tatgtggaaaagaccaagaacctgctgacctttgcagagggatcaaaggaaatgcccaaa
gaaaagaagaagggcagcggtggtggaggaggacgtcgtaagaaaggaggcgacatggac
gattttgttaatgacgagtctgacgaggacctgccattgaagaagaagaagaagagaaag
gccagtagcagcgaacaggaggaggatgagaagggagagaggaagaagaagaagaggaga
cctgctaaaggaggagaagatgacagcgatgaggaaggaacgtcacgatccaagaagcag
cgcaaacccaaagaaggacgcaagaagattgagaaggctcagcctgagcgtctgccaccg
tctcttaaaggaaagatcaaatctaaggctatcatctcgtcttctgagtcctcctcagat
gaggatggactgaaaatagcagaagacagacatcaaagagacagtggttcgggatctgac
gatgaagtcggccacaggaagcgcattgcatctgacagcgactccgacggcggccgtaac
cgctccggtagtgaggcaggcagccctcggcgctccgccggctctgacgacgacgaatct
ggcagtgaccgtccagtgaagaagagaagggtgcagaggcagtccgactctgaacagtcg
gacaatgagagcaagaggagtcggtcgggatcagacgacgaatcgagggccggatcaccc
gccgcggcatcagaccgaggatcggaagcgggatcggacaacgagggctccccacgccgc
tccgacaatggctccgagcaggaggcctccaacaacgaagatgatgacagtgattaa
DBGET
integrated database retrieval system
