Oreochromis niloticus (Nile tilapia): 100691410
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Entry
100691410 CDS
T06104
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100691410 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
onl03051
]
100691410 (psmc6)
Proteasome [BR:
onl03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
100691410 (psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_22
AAA_2
RuvB_N
PRS7_OB
AAA_lid_PRS2_C
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_33
AAA_11
TIP49
AAA_18
RNA_helicase
AAA_3
Csa3_N
NPHP3_N
Mg_chelatase
AAA_24
bpMoxR
AAA_28
DUF5906
TsaE
NACHT
AAA_25
AAA_17
ATPase
DUF3829_2nd
Parvo_NS1
IstB_IS21
ATPase_2
GAS
Motif
Other DBs
NCBI-GeneID:
100691410
NCBI-ProteinID:
XP_003456065
Ensembl:
ENSONIG00000001657
LinkDB
All DBs
Position
LG15:28561418..28569812
Genome browser
AA seq
389 aa
AA seq
DB search
MADTREKALQDYRKKLLEHKEVDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSSPITKHGEIDFEAIVKLSDGFNGADLRNVCTEAGLFAIRSDRE
YVTQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggacactagagaaaaagcgctgcaggactacaggaaaaaattgctggaacacaaa
gaagttgatgggcgactaaaagaattgagagagcagctgcgagaacagaccaaacagtac
gagaaatcagagaatgatctcaaggctctccaaagcgtcggtcagattgttggagaagtg
ctcaaacaactcactgaggagaaattcattgtaaaggctaccaatggaccccgatatgtg
gttggatgtcgcaggcagttggacaaatcccagctgaagccagggaccagagtggctctg
gacatgactacgcttactatcatgaggtacctgcccagagaggtggaccccctggtatac
aacatgtcccatgaggaccctggcagtgtctcctattctgagatcggaggcttgtctgaa
cagatccgtgagctgagagaggtgattgagctcccactgaccaaccctgagctttttcag
agagttggcatcattcctcctaaaggctgtctgctgtatgggcccccaggcactgggaaa
actcttcttgctagagctgtggccagtcaactggactgcaatttcctgaaggtggtgtcc
agctccattgtggacaagtacattggtgagagtgccaggctgatcagagaaatgttcaac
tatgccagggaccaccagccatgcatcatcttcatggatgagattgatgccattggtggc
cgacgtttctcagagggaacctcagctgacagagagattcagaggactttgatggagctc
ttgaatcagatggacggcttcgacacattgcacagagtcaagatgatcatggccaccaac
agacctgacactctcgaccctgccctgctgcggcctggcagactggaccgcaaaattcac
attgaactgcccaatgagcaggctcgtcttgacatccttaagattcactccagtcctatc
accaagcatggagaaatagattttgaagccattgtgaagctgtcagatggtttcaatgga
gctgacctgagaaacgtgtgcacagaagcagggttatttgccatccgctcagaccgtgaa
tacgtaactcaggaggactttatgaaggccgtgaggaaggtggcggactcaaagaagctc
gagtctaagctggactacaaacctgtataa
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