KEGG   Oreochromis niloticus (Nile tilapia): 100691661
Entry
100691661         CDS       T06104                                 
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
  KO
K13174  THO complex subunit 5
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03013  Nucleocytoplasmic transport
onl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100691661 (thoc5)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100691661 (thoc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onl03019]
    100691661 (thoc5)
   03041 Spliceosome [BR:onl03041]
    100691661 (thoc5)
Messenger RNA biogenesis [BR:onl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100691661 (thoc5)
Spliceosome [BR:onl03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100691661 (thoc5)
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 100691661
NCBI-ProteinID: XP_013130855
Ensembl: ENSONIG00000013656
UniProt: I3K7T4
LinkDB
Position
LG12:complement(17572676..17580244)
AA seq 684 aa
MSSDALKKRKSKVLRNEGGTPEMKRGRADGDQQDVRVYHEEVELDGRDPQQDFLQYKETC
ESLANLMSEIQELKANGAKDGCAEVEKKRMQSCIHFMNLKKLNRLAHMRLKKGRDQTHEA
KQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYQEAPPEISRPQLT
KNDPHQLTLARLDWELEQRKRLAEKYKESLASKETIQKSIEVKKEHLRSLQPGLNAIMQA
SLPVQEYLSMPFEQTQKQTEIARHLPPPLYVLFVQANAYGQACDKNLIVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTAGGQLDDKRREMLKRHPLSLGIDLKCKDGS
VLHLYFYYLMNLNIMTVKTKVSTSTDLSTAISAGELLKSDTLLSCLYTSDQGRETPNPAN
RYQFDKVGIISFGDYVEELGHPYMWVQNLGGLHFPSDASEGVRVGSSLSASHMENTMKLL
RGRVQSRLALHRQFASLEHSIIPISSECQHLFPAKIISRLARWTTITYQEYLELPYTRHV
TEAGLAKETDLYFMGVVERGTARLNAAVVLSPRYPEISPLFSLSLSWKGERSGRTDDNLR
AMESEVNVFKSELQGPRPGHQLLTNQFARLCVCLDVYLETEGQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgtcgtcggacgccctgaaaaaacgaaagtccaaggttctccgcaatgaaggaggaacc
ccggagatgaagcggggtcgagcagatggggaccaacaggatgtgcgtgtgtatcatgag
gaggtggagcttgatggcagggaccctcagcaggacttcctccaatacaaagaaacatgt
gagagtctggctaatctcatgagtgagatccaagagcttaaggccaacggagctaaggac
gggtgtgcagaggttgagaagaaacgtatgcagagctgcatccactttatgaatctgaaa
aagctcaatcgacttgctcatatgcgtctaaagaaaggcagagaccaaacacacgaggca
aaacagaaagtcgatgtgctgcaccttcagctgcaaaatctgctgtatgaagtcatgcat
cttcagaaggagatcagcaagtgtctggagtttaagtctaagcatgaagaaattgactta
gtgagtgaagaagagttttaccaggaggcaccgccggaaatttccaggcctcaactcaca
aaaaatgacccccaccaactcacactggcacgactggactgggagcttgaacaacggaag
aggttggcagagaaatacaaggaatcactagcctcaaaggagactattcagaagagcatt
gaggtgaagaaggagcatctgagaagcttgcagccaggtcttaatgccatcatgcaggcc
tccctcccagtccaggagtacctgtctatgccttttgaacagactcagaagcagacggag
attgcccgccatctgcctccacctctctatgtcctgtttgttcaagcaaatgcttatggc
caggcgtgtgacaagaacctgattgtctcaattagtggtgatgtagatgaggccaaagct
ctgtccaaacctccagaagattcccaggatgatgagagtgattctgatgcagaggaggag
caagagaaaacgaagagaagaaggccaactgcaggtggccagctggatgataaaaggcga
gagatgctgaagaggcaccctctgtctctgggcatagacttgaagtgtaaagatggcagt
gtactccatctttacttctactacctgatgaatctgaacattatgactgtcaagaccaaa
gtgtccacctccactgatctcagcacggccatcagcgcaggggagctcctgaagtcagac
actctcctcagctgtctctacaccagcgaccagggacgagaaacgcccaatccagctaat
cgctaccagtttgataaagtcgggatcatttcctttggcgattatgtggaggagctgggc
catccctacatgtgggttcagaatctcggaggacttcattttcctagtgacgcttcagag
ggtgtgcgtgtgggtagttcactgagtgcgagccacatggagaacaccatgaagctgctg
aggggacgagtccagtcccgcttggctttgcacagacagtttgcctctttagagcacagc
atcatccccatctccagcgagtgtcagcacctttttcctgccaagatcatttcccgtttg
gcacgttggaccacaatcacttaccaggagtacttggaacttccatatacacgtcatgtg
actgaagctgggctggcaaaggagactgatctgtactttatgggagtggttgaaagaggc
acagctcgtcttaatgctgcagtggtgctgagtcccagatacccagagatatctcctctt
ttctccctctctctgagttggaagggagagcgcagcggacgcaccgacgacaaccttcga
gccatggagagcgaagttaacgtgttcaaaagtgaactacaaggaccacgtcctggacac
cagctcctgaccaatcagtttgcacggctgtgcgtctgcctggatgtttatttggagaca
gaaggacaagacgatagcgtggaaggaccgcgagagttcccccgtgagaagatgtgcctg
cgcactgtcaggggtccaaatcgtctgaagccgttcaagtataaccatcctcagggtttc
ttcagtcatcgctaa

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