Oreochromis niloticus (Nile tilapia): 100691664
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Entry
100691664 CDS
T06104
Name
(RefSeq) putative leucine-rich repeat-containing protein DDB_G0290503 isoform X1
KO
K20478
golgin subfamily B member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100691664
Membrane trafficking [BR:
onl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
100691664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC39
ATG16
Motif
Other DBs
NCBI-GeneID:
100691664
NCBI-ProteinID:
XP_019221479
LinkDB
All DBs
Position
LG1:2797088..2837264
Genome browser
AA seq
2603 aa
AA seq
DB search
MLKWFSGEEGEPGSGGSGSPPSHAGGGEIPVEEMAERLTQTEQLVTQLKEMIREKDAALC
SKDDQLKAEKEACEAKLSKLRLQNKAKVTSLTAQLEELKKQQGPSTPTHGKKGSSEGGEQ
ASRGKIVLLKKKVDELEQQLAQRDVELENKMKELESQRQRGEEVDTMLTEKDKKLAEKEA
YIVHLQTALAGDQPITPAPPQKAEDGGAMQELQLLVQSLTKKVGEAEERYSLLQEQTDSL
KDLLATEKEQYSQKESMYKQNIQTFKDIIIQKDSQLMEVNQMHEQELFKLAAKSDASADL
EQLLKALKQKLHEKEEVLLGKTQVIDVLQGEVDGRDQQIKELSEQLQRLQVERESLESKM
EAEKHVMRAQLRDLMEKQQAEVQRMTEQHQAQLDQTQQDLMRQLEDLRRAQAAAPPASQE
ASGSGNVLTDSASIQRIAELEAQAKQKTDEASRSEAKFLKMKAWSKSRIRQLEEELKKSQ
AGVAPPDLTALRSRITALEEEREENLWKVEQYEEVKAKNEMLEAKLVVYEEQQRTLQADL
EQFTKRAASQASESGSADDTQSQVLEWQEMVAEVVSARDRAREEKAALSLRISHMEEERE
ELIEDDWFFPGCSDPALVTRQQELEEELSQARGLDQHRAKKLALPSQRSLQEDFELDGQA
PFQDPRSISESTTPMEGENMGGWWPEYSTPDTDGLRSVVEELELERNQLQEQILSLEERC
QDLEDRLQLQARIEALQNESDKLQSQLASVRSQQSREAEKHQLLVNSLNEQLKGLTDTQE
CLQSSLIEKENTLAKTSEKLELISSLRQSLSEKDIQCKELSDKLLQTEHTLENISMKYTM
SEKQCSELKAEVMDLTQKLSVLKEKTQKQDVTIETLQTDLDQTNEELDKLNTSHLEERAQ
LIYDLQSCEREIDNLKDALLEKDKEISTLVGNMAEYAEQVSALKQEIKLKEESLVQVENA
LSKAEREANIMKESQNSDQQALNNKITELVEKLKEAEMEMVKAKDERESKGVEVEHLIKQ
AEKDKTTIQDLRGEIQKQNVSHHNHLSECETHITSLKEQLAVSAQKLQESEGLVLQLKDR
NASNEKLQQELNEKEQTYEKELKSFKEEQNKLLAQVEKYNTDFQTLSKQLDKQVQSEENV
KQVMQEKMKKMASLENQLKDERQKFNTENEKLCNELQSKSENISKLESLLKSMTTEKEQL
QENLKGLNEELELERRNLKELNEKVTSTLEFNSSLENQVQVLTKERDRLELEVTEHVKNT
SQVTAEMDSLQVKISELEMQHSQSNTIIQGLQKDKEELTTRTLELNRVLEQSTHSTSEIM
LAKTNECSSLQQLLREREETVTQQQEKVQSLTSKVDKMQRDLAEKEQTVTELQARIEAQQ
NEQAQLQETLSLLQEQQSSLKSGLLEKDAMYKQKQEEFQSLQKETENQKNIVSRLQAEAE
SLIEERSQLRQQLGEREEMLKNSTQECQKHKDELNNKNTTIRSLSDRISVTEENARKLEC
EAEQSKTELASLKSHSQALSEENRHLRDACESKEKELAQQRQLLSDLDGQLKATLDQNSS
FSMKIISLTENNQRLQEELAQNMKSVSELTAERIVLQEKASGLEIQISDSQKIVASLLKE
KEELTAATDELKKVLKESEQAISVGLLEKTNECANLLKNMKEKEQQLQSLQEQIDSLKMQ
VDQLSMSLVEKDQTVSEQNSQIMAQQNQLLQLQDTVSMLQEQGSVLKSGLMEKDVMLQQK
VEECSVSLNEVKLQKELASQMQVEVELLRKECVEAKQQLEQKEQALKEVTHEFQNHKDEL
NKRNESVISLSAQLGAMNESASEMEVEINNLKASVQKLTAENCQLIKDEGQRKAEITDFK
DNIQALIEQNVRLKSELQKTVAELAKANEEAANLNLEIQGKNDALKQQENLIQQLNSEIA
EQGELLKEKEGKTLELEDSVCTLRGQVDSLTSESSILKNSLEKKEESSLKYQSTSSAAFD
SLTSHLQAKEAECESLKEKISHLEESVSKLNNNLEAQTSEAANLKMALEEKEAALLEQSK
ALQDFQKRGDEALLFKTQFMESTELASQLQSQIQLLSTESEKCRKTAEETQSAFNNLQEK
YAATLEELQDSRKQLSQKTDEVSELRMLLDDSNNKYQTAKTTIETLKTNLHVIQEKLEKA
EDLNSSLSKEKDDAFASHQASVSLLTVEIERLKSQHLQVVAQMNALTENLEQREMALHAI
NSQYSAQAKHASQLVSEMQKLEEQNKRLNEEIGLSKEENQKLHIALSNENTHLKEEFRKL
FAEKEELERRHQQTLAELQVQMEQKSSSVNELVERMTSEKQSLQAKGMHQKMDELQQMAH
KEVRSQQEATADQRSDAEPKDLPVKQESGLEEVVSRLDAERRQLHRDLQRCMYEIQQRDQ
YFQQLNTKLQEAVEEKGAVTAQLRAVSQTLRDTQNRCHWLESQVQSQVQGLLHTEVAPGA
PQEKSNDSMLSESAEASQLRERLLEVELSLADERARRETAEEALRLAEDRVKSAASSLSR
DSHRDFSIEMEAEEEWEALTLNPNQPLITRKVKGGMVACRRWLRGRSLYFSRLLTSRTRS
RYFFLAYLFTIHVLVLMCLTGTL
NT seq
7812 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaatggttttcgggtgaagagggagagcctggctctggaggctcgggctctcca
cccagccatgccggtggcggagagattcctgtggaagaaatggcagagaggctgacccag
actgagcagcttgtcactcagctgaaggagatgattcgtgaaaaagatgcagctctttgc
tccaaagatgaccagctgaaggctgagaaggaggcctgtgaagccaaactgtccaaactg
cgtctgcagaacaaggccaaggtgacgtctctgacagcacagctagaggagctgaagaag
cagcagggcccgagcacaccgacacacggcaaaaagggttcatcagaaggaggagaacaa
gccagccgaggcaagattgtcctgctgaagaagaaggttgatgaactagaacagcagctt
gcacaaagagatgtggaactggaaaacaaaatgaaggagttggagtctcagcggcagcgt
ggtgaagaagtggacactatgctgacagagaaggacaagaagctggcagaaaaagaggcc
tacattgtccacctgcaaacagcgctggctggagatcagcccatcacacctgcaccacca
caaaaggctgaggacggcggggcgatgcaggagctgcagttgctggtacagagcttgact
aagaaagtgggggaagcagaggagcgctacagtttgctgcaggagcagacagacagcctc
aaagacctgctggctacagagaaggagcagtacagccaaaaggagagcatgtacaagcag
aatatccagacattcaaagacatcatcattcagaaggacagccagctgatggaggtcaac
cagatgcatgaacaggagctcttcaagctagcagccaagtcagatgccagtgcagacttg
gagcagcttctcaaggctctaaaacagaagcttcatgagaaggaggaagtgctgctgggt
aaaactcaggtcattgatgttctccagggagaggtggacgggagagatcagcagataaag
gaactctcagagcagctgcagaggctacaagtcgagcgagagagccttgaatccaaaatg
gaggcagagaagcatgtgatgcgagcacaactccgtgacctgatggagaagcagcaggca
gaggtgcagcgaatgaccgagcagcatcaagcacagctggatcaaacccaacaggatctc
atgaggcagctggaggacctgaggagagcccaggcagcagcaccacctgccagtcaagag
gcatcaggaagtggaaatgtgctcacagattcagcttccatccagaggatagctgagctg
gaagcacaagcaaaacagaaaacagatgaagccagcagatcagaggccaagttcctaaaa
atgaaagcttggtctaaaagtcgaatcagacagctggaggaggaactgaagaaaagccag
gctggagtcgctcccccagacctgactgctctgcggagtcgcatcactgcactcgaggag
gagagagaagaaaacctctggaaggtggagcaatacgaggaggttaaagcaaaaaacgaa
atgctggaggcaaagttggtggtgtatgaggagcaacagaggacactgcaggcagacttg
gagcagttcaccaagagggctgcctctcaggcaagtgaatcaggcagcgctgatgacact
cagagccaggtgctggagtggcaggagatggtagctgaggtggtcagtgccagagaccgg
gccagggaggagaaggctgccttgtccctccgtatcagccacatggaggaggaaagagag
gaactgattgaggatgactggttctttcctggctgctccgatccagcactggtcactcgg
cagcaggagttggaggaggagttgtctcaagctcgggggctcgaccagcacagggccaag
aagctggcacttccatcccagcgaagtctgcaggaggactttgagctcgatgggcaggcc
ccgtttcaggatcctcgaagtatctcagagagtaccactccaatggaaggggagaacatg
ggaggttggtggcccgagtacagtactcctgacacagatggcctgcggtctgttgtggag
gagctggagctggaaagaaatcaactacaggagcagatactgagcctggaggagcgctgc
caggacctggaggatcgactgcagctgcaggcccgtatagaggcattacagaatgagtca
gacaaactgcagagccaacttgcaagtgtcagaagtcaacaaagcagagaggcggagaag
catcagctgctggttaacagtctcaatgaacagctcaaagggctgactgacacacaggag
tgcctgcaaagctccctcattgagaaggagaatactttggccaagacatctgagaaactt
gagctcatcagcagccttcgacaatcactgagtgaaaaagacattcagtgcaaagagctg
tctgacaagctccttcagacggagcacactcttgagaacatttccatgaaatacactatg
tcagagaaacaatgctctgagttgaaagcagaagttatggatctcacacaaaagctgagt
gtgctgaaagagaagacgcaaaaacaagatgtcaccattgaaacattacaaactgacctt
gatcagacaaacgaggagctggacaaactgaacacctcgcatttggaagaacgagcccag
ctcatttatgaccttcaaagctgcgagcgggaaatcgataaccttaaagatgctctgctg
gaaaaggataaagagatatcaactcttgttgggaacatggctgagtatgcagagcaggtc
tcagcactgaaacaagagatcaaactcaaagaggagagcctggtacaagtagaaaatgca
ctgagtaaggcagagagggaggccaatataatgaaagaatcacagaattcagaccagcag
gcccttaataataagatcacagagctggtggagaaacttaaggaagctgagatggagatg
gtgaaggccaaagatgaacgagagtctaaaggagttgaggtggaacacttaatcaagcag
gctgaaaaggataagacgactattcaggaccttcgaggagaaatccagaagcagaatgtg
agccatcataatcatctttctgaatgtgaaacgcacatcacttcactaaaggaacagctg
gcagtatctgcacagaaactacaggagtcagaaggacttgttttgcagcttaaggataga
aatgcaagtaatgagaaactacagcaagagcttaatgagaaagagcagacatatgaaaag
gagctcaagtctttcaaggaagaacagaataagcttttggcacaggtggaaaagtataac
actgactttcagaccttatcaaagcaattagacaagcaagttcagagtgaagagaatgtc
aagcaagtaatgcaagagaaaatgaaaaagatggcatcactcgaaaaccagctaaaggac
gagaggcagaaattcaacactgaaaatgagaaactgtgcaatgaacttcaaagcaaatct
gaaaatatctccaagcttgaaagtctcttaaaaagcatgacgactgaaaaagagcagctc
caagaaaacctgaaggggctgaatgaggagcttgaacttgaacgtaggaatttaaaagag
ctaaatgaaaaggttacatctactcttgaattcaacagcagtctggagaatcaagtgcaa
gttcttacaaaagagagagacaggcttgaattggaagtaactgagcatgtcaaaaatact
tcacaggttacagccgaaatggattccttgcaagtcaaaatatctgaattggaaatgcaa
cactcacaaagtaacacaattattcaagggctacagaaagataaagaggaactaactact
cgaactcttgagctaaatagagttcttgagcaaagcacacattcaacctctgagatcatg
ttggcaaaaacaaatgaatgtagttcgctccagcagctactcagggaaagagaggagacg
gtgacccagcagcaggaaaaggtgcaaagcttgacgtctaaggtagacaaaatgcagcgc
gacctcgccgaaaaagagcagactgtcactgaacttcaagcacgaatagaggcccaacaa
aatgagcaagcacagcttcaggaaactctgtctctgcttcaggaacaacaaagtagtctg
aagtctgggttattggagaaggatgcaatgtataaacagaagcaggaggagttccagagt
ttgcagaaggaaactgaaaaccagaaaaatattgtatccaggctacaagccgaggcggag
tcgctcattgaggaacgctcacaactcagacagcaactgggagagagagaagaaatgttg
aaaaattcaactcaggaatgtcagaagcacaaagatgaactgaataacaaaaacacaact
atcaggtctctaagtgaccgaatcagtgtcacggaggaaaatgctagaaagcttgagtgt
gaagctgagcagagtaaaacagaattggctagtttaaaaagccacagccaagctttgtcc
gaggagaaccgccaccttcgtgatgcatgtgaatccaaagaaaaggagcttgcacaacaa
aggcagcttctatctgatcttgatgggcagcttaaagcgacccttgaccagaactccagt
tttagcatgaagattatcagtctaacagaaaataatcaaagactacaggaagagttagca
cagaacatgaaatcagtttctgaacttactgctgagagaattgttctccaagaaaaagct
tctggccttgaaattcagatctcagatagtcaaaaaatagttgctagtctgttgaaggag
aaagaggagcttactgcggcaacagatgaattaaaaaaggtcctcaaggaaagcgaacag
gcaatctctgtaggtctactcgagaaaacaaatgaatgtgctaatctgttgaaaaacatg
aaggagaaggagcaacagcttcagagtttacaagagcaaatcgatagtttaaaaatgcag
gtcgatcagctgagcatgtccttggttgaaaaagaccaaactgtgtcagagcagaattca
cagataatggcccagcagaaccagctgctgcagcttcaggatactgtatctatgcttcag
gagcagggatcagttttaaagtcaggactaatggaaaaagatgtcatgctgcagcagaaa
gttgaggaatgtagtgtatctctgaatgaagtcaagctacagaaagagctcgcatcacag
atgcaggttgaggtagagttgctcaggaaagaatgcgtggaggccaaacaacaactagag
cagaaagaacaagcactgaaagaagtaacacacgaatttcagaaccacaaagatgagctg
aataaacgaaatgaatctgtcatttcgctcagtgctcagcttggggccatgaatgagagc
gcttcagagatggaggtggaaattaataacctgaaagcatctgtgcagaaactcactgca
gaaaattgtcagctgataaaggacgagggccagaggaaagcagagataactgattttaaa
gacaacattcaagccctcattgaacagaatgttcgattgaaatctgaacttcagaaaaca
gtggcagagctggccaaagcaaacgaagaagctgcaaatctcaacttggaaatccaagga
aaaaatgacgccctgaaacagcaggagaatttgatccagcagctcaacagtgagattgct
gagcagggcgagctgctgaaagagaaagaaggcaaaactttggagcttgaagattctgtg
tgtacactcagaggccaagttgacagtctgacatcagagtcttccatactaaagaatagt
ttggagaaaaaggaggagtcaagtcttaaatatcaaagtacttcttccgctgcctttgat
agtctgacttcacatctacaagccaaagaggcagaatgtgagagccttaaagaaaagata
tcacaccttgaggaatctgtctcaaagctcaacaacaacctggaagcacagacatctgaa
gcggcaaacctcaaaatggccttggaagaaaaagaagcagctcttttggaacaatcgaaa
gctctccaggatttccagaaaagaggagacgaagcactgctgttcaaaactcagtttatg
gaaagtacagagttggcatcacagctgcaaagtcaaattcagttactgtccactgagtct
gaaaaatgtagaaagacggcagaagaaacccaaagtgccttcaataacctgcaggagaaa
tatgctgccaccttagaagagttacaagactcgaggaagcaactctctcaaaagacagat
gaggtgtctgagctccggatgttattggatgattctaataacaaatatcagactgcaaag
accaccatagagacactgaaaactaacttacatgtgatccaggagaaactggagaaagct
gaagacttgaactccagtctttcaaaggaaaaggatgacgcatttgcttcgcatcaagcg
agcgtgtcattgttgactgttgaaatagaaagactcaaatcacagcatcttcaggtcgtg
gctcagatgaatgcactgacagaaaaccttgaacagagagaaatggctctccacgcaatc
aatagtcagtacagcgcccaggccaaacatgcatctcagctggtttcagaaatgcagaag
ttggaagagcagaataagagactgaatgaggagataggattgtcaaaggaagagaatcag
aaacttcacattgctctcagtaatgaaaacacacatttgaaagaggaatttaggaaactt
tttgcagagaaagaagagctagaaagaagacatcaacaaacgttggcggagctgcaggtt
caaatggagcagaaatccagcagcgtgaatgaactcgtggagagaatgacgtctgagaag
cagagccttcaagcaaagggaatgcatcagaagatggacgaactgcaacaaatggcacac
aaagaagtgagaagccagcaggaagcaacagcagatcagagatctgatgctgagccgaag
gacctgccagtcaaacaggaaagcggtctggaggaggtggtgagtcgtttggatgcagag
aggaggcagcttcacagagatctgcagcgctgtatgtatgagattcagcagcgagaccag
tacttccagcagctcaacacaaagttgcaggaggcagtggaggagaaaggtgctgttaca
gctcagctaagggctgtttcccagacgctgagggacacccagaatcgatgtcattggctg
gaaagccaagtccaaagccaggtgcagggtttacttcacactgaagttgcaccaggggct
ccacaggagaagagcaacgactctatgttaagtgaaagtgctgaagccagtcagctcaga
gaaaggctgctggaggtggagctgagtctggcagatgagagagccaggagagagacggcc
gaggaggctctgcgtcttgctgaagacagagtaaagagtgctgcctccagtctgtccagg
gacagtcacagagacttcagtatcgagatggaagctgaagaggagtgggaagctctaact
ctcaacccaaatcagcctctcataacacgaaaggtgaaaggagggatggtggcgtgtcga
cggtggctccgaggcaggagcctttacttctccaggctgctgacgagtcgcactcgctct
cgatatttctttctggcttacttgttcaccatacatgtgcttgttctcatgtgcctcact
ggaaccctgtag
DBGET
integrated database retrieval system
