KEGG   Oreochromis niloticus (Nile tilapia): 100691704
Entry
100691704         CDS       T06104                                 
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03018  RNA degradation
onl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100691704 (lsm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100691704 (lsm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onl03019]
    100691704 (lsm7)
   03041 Spliceosome [BR:onl03041]
    100691704 (lsm7)
Messenger RNA biogenesis [BR:onl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100691704 (lsm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100691704 (lsm7)
Spliceosome [BR:onl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100691704 (lsm7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 100691704
NCBI-ProteinID: XP_003439986
Ensembl: ENSONIG00000001801
UniProt: I3J065
LinkDB
Position
LG23:complement(44794494..44796326)
AA seq 103 aa
MADKDKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcggataaagacaaaaagaaaaaggagagcatcttcgacttgtccaaatacatcgat
aagccgattcgtgtaaagtttcaaggaggacgagaagccagcggtgtccttaaaggattt
gaccctctgctgaacctggtgctggacggcactattgaatacatgcgcgatccagatgac
cagctgaagctgacagaagacaccaggcagctggggctggtggtctgcagaggaacctcc
gtagtgctgatctgtcctcaggatggcatggaagccataccaaacccgttcatacagcag
caggacggctaa

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