KEGG   Oreochromis niloticus (Nile tilapia): 100691790
Entry
100691790         CDS       T06104                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04137  Mitophagy - animal
onl04144  Endocytosis
onl04145  Phagosome
onl04148  Efferocytosis
onl05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100691790 (rab5c)
   04145 Phagosome
    100691790 (rab5c)
   04137 Mitophagy - animal
    100691790 (rab5c)
   04148 Efferocytosis
    100691790 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100691790 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:onl04131]
    100691790 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100691790 (rab5c)
   04031 GTP-binding proteins [BR:onl04031]
    100691790 (rab5c)
Membrane trafficking [BR:onl04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    100691790 (rab5c)
 Endosome - Lysosome transport
    100691790 (rab5c)
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100691790 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   100691790 (rab5c)
  Exosomal proteins of colorectal cancer cells
   100691790 (rab5c)
  Exosomal proteins of bladder cancer cells
   100691790 (rab5c)
GTP-binding proteins [BR:onl04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    100691790 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 100691790
NCBI-ProteinID: XP_003442080
Ensembl: ENSONIG00000002425
UniProt: A0A669BCP2
LinkDB
Position
LG4:26581653..26591849
AA seq 220 aa
MAGRGGPARTNGTAASSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIAIAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGAAGAGGRTRGGVDLQEAAPQGRSGQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggcgaggtggaccagcacggaccaacggcaccgcagcaagcagcaagatttgc
cagtttaagctagtgctgttgggagagtcggcagtgggcaagtccagcctggtgctgcgc
tttgtcaaaggccagttccatgagtaccaggagagcaccatcggagctgccttcctcaca
cagacggtatgtttggatgatacaacagttaagtttgaaatctgggacactgctggacaa
gaacggtatcacagcttggcacccatgtactacagaggagcccaggctgccatcgtggtc
tatgatatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccag
cgacaagccagcccgaatattgtaattgcaattgcaggaaacaaagcagacctggccaac
aagagagctgtagatttccaggaagcacaagcatatgcagatgacaacagtttgctcttc
atggaaacctcagctaagactgcaatgaatgtcaatgagatttttatggctatagccaag
aagcttccgaaaaacgagcctcagggtgcagcaggcgccggcggacgaaccagaggtggc
gtggacctgcaggaagctgcaccacagggcagaagtggccagtgctgcgggggcggcaac
tag

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