KEGG   Oreochromis niloticus (Nile tilapia): 100691799
Entry
100691799         CDS       T06104                                 
Name
(RefSeq) probable histone deacetylase 1-B
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03082  ATP-dependent chromatin remodeling
onl03083  Polycomb repressive complex
onl04110  Cell cycle
onl04330  Notch signaling pathway
onl04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100691799
   03083 Polycomb repressive complex
    100691799
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100691799
   04350 TGF-beta signaling pathway
    100691799
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100691799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:onl03036]
    100691799
Enzymes [BR:onl01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100691799
Chromosome and associated proteins [BR:onl03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     100691799
   HDAC complexes
    Sin3A-HDAC complex
     100691799
    BRAF-HDAC complex
     100691799
    REST complex
     100691799
    SHIP complex
     100691799
    MiDAC complex
     100691799
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     100691799
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100691799
  Chromatin remodeling factors
   NuRD complex
    100691799
SSDB
Motif
Pfam: Hist_deacetyl Glypican
Other DBs
NCBI-GeneID: 100691799
NCBI-ProteinID: XP_003443815
Ensembl: ENSONIG00000007720
UniProt: I3JLI6
LinkDB
Position
LG22:30535126..30541813
AA seq 482 aa
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
GEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKTFNLPLLMLGG
GGYTIRNVARCWTYETAVALDCSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSGDEEEEDPDKRISIRAHDKRIACEEEF
SDSEDEAEGQGGGRRNAANHKKAKRVKKEDEKEGEEKKEVKEEEKEEEKMDTSGPKEEVK
TT
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgctgtctcaaggaacaaagaagaaagtttgctattactatgacggtgatgtgggg
aattactactatggccagggccatcccatgaaaccgcacaggatccgtatgacgcacaac
ctcctcctcaactatggactatacagaaaaatggagatctatagaccgcacaaagccagt
ggtgaagagatgacaaagtaccacagtgatgattacattaagttcctgaggtccattcga
ccggacaacatgtctgagtacagcaaacaaatgcagagattcaatgttggagaggactgt
ccagtctttgatggtctctttgagttttgtcagctctcaacaggtggctctgtggctgga
gcagtgaagctgaacaagcagcagacagacatcgccatcaactgggccggcgggctccat
cacgccaagaagtcagaggcctctggtttctgttatgtcaatgacatcgtgctggcgatc
ctggagctgcttaaataccatcagagggtgttatacattgacattgacatccaccacggt
gatggagtagaggaggccttctacaccacagacagggtcatgaccgtgtctttccacaag
tatggggaatactttcctggcactggagacctgagggacattggagcaggaaagggcaag
tactatgcagtgaactaccctctcagagacggtattgatgatgagtcctatgaagccatc
ttcaagcctatcatggctaaagtcatggagatgtaccagcccagtgcagtggtgctgcag
tgtggagctgattctctgtctggagacagactgggctgctttaacctcaccatcaaaggt
cacgccaagtgtgtcgagtacatcaaaactttcaaccttcctctgctgatgctgggcggt
ggaggctacaccatccgcaacgtggcccgttgctggacctacgaaaccgccgtcgccttg
gactgctccatccccaatgagctgccctacaatgattactttgagtattttggccctgat
ttcaagctgcacatcagcccctccaacatgaccaaccagaacaccaacgagtacctggag
aagatcaaacagcgcctgtttgagaacctgcgtatgctgcctcatgcccccggtgtccag
atgcaagcgatcccagaggatgcccctcatccagacagcggagacgaggaggaggaagac
ccagacaaacgcatctctatccgagcccacgacaagaggatagcctgcgaggaggagttt
tctgattctgaagatgaggcggaggggcaaggcgggggacgccggaacgcagctaaccac
aagaaggctaaacgagtgaagaaggaggatgagaaggaaggagaggaaaagaaagaagtc
aaagaggaagagaaggaggaggagaaaatggacacatcaggaccaaaagaagaggtgaag
acgacctga

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