Entry |
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Symbol |
spg11
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Name |
(RefSeq) spatacsin isoform X1
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KO |
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Organism |
onl Oreochromis niloticus (Nile tilapia)
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Brite |
KEGG Orthology (KO) [BR:onl00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:onl03400]
100691867 (spg11)
DNA repair and recombination proteins [BR:onl03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100691867 (spg11)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
LG7:1002474..1022841
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AA seq |
2428 aa
MLEVDQRLQAGSTEVAVIPENQHCGDVADIRKAELAPGGSLLGCLGVRGQLVVWDPADRE
ASPAAVEGSYRDFSWEEVSVHSRGVGGFRLLAVGSQGDLKLLEVRAERSAFISVLCVCEC
PADRLLQTVRDQDPGVSELQVVQVLSFVTGRCCVLLNSDWLLQLQWQQEEEEPQTLSCCR
VQLADGDSCSAVHHCVSMETLFALSSTGLISVCSVSDGTLLASINLPAYLSSSPAEDELT
SFPFSSSPSFCLLQVSADLSTAVAVTQSHAAVAVDLNHYFRMFPDHLLCAAPRPRPPLQP
QHPRDQDSLSSSGFSISALGATFSADRSWEARLTFLYSRAQQATAPSSSSSSSSRPPRTS
SWFSSLPHLDSHLAPSSAHSRVPPGGLTVAFAVPESSASSQLTVSEFSALLTFVRPGNQQ
TTVALWDIREYGNVSYHQAAGEAAPVQRCGERQHRLLLKKAGVFQVLFSVSQQDLLSRLM
LFGSAATVDAVCHLNSWGRCSIPIHALQTGLKNRQLDTVDFYLKSKENVLNPPAAAFSSA
DHPAASTLSLTDRVQELCPALDLLCSAVRDSNSEAQSRQFSEQLLNITLSFVNTQIRSVL
SNTHHEDSAMQSCINVLDRYVAELRSYMKRFPWAAGPDVSATRAAAPAKEEAQRDEWEQL
SAEEMIHQSILTNQIPRAQAVLRSQNRPERRLSALRREGLRQVFSCLQRRDLETTNTLLA
NMGFSVKQQLHLICLHTDDEELRELMVEELSRRSYFPEEEKESVEFIGEMEKLGSQPAVR
CTGSTSNQGIQKLPGTVRMARKEGGGEEVLKELEVQRRPREEEEEEERGGLWRKLRLDWV
KNWDQSCRTAVLLSRLQYAELRACDAAVLWRYLTVLHDQRRVVDWIQNTETSGAPRWPDL
TPELVNDSTACSSYMRENILDLLARRGVFIPDELAHLEQLLWRLAQGGGVMASSPPIPQY
RSPLGLDLHGVFITFCLEHNLQYLLYTYLEHYRLTPRNCSLLSSQSLSERQPWFEMLVRI
QEITRDLSDPGLVFQASLTSAQVLLPGSQASLSSLLLEGHSLLTLAAIMFAPGGIDQVMA
QGERSGRSERTVDPQLLKMALAPHPKLRAALFPAVPRGNGPPSDISVYHLLQSLHPLDPS
RLFGWQAANTLNSTETSELPHFSSPHLVQRFALKENLDYLYFLHHGRPSFAYATFLVQQL
SGSGDVRLTLQEASRRASRLALQRFNMPSVASAAICFCELLGVCSLKLRVDIRAMNAILQ
HWNQHNTHSSPTQHLHTLVSKGVKLVEAEPGAAEELIGYLEAAVTDSLEQRGIGRSSYEA
AQEWALPVQFCQLHNLQLSSVYPAHCAHDGQFIHFLLFVQLHNFPPQQVRSLAAQFGPTL
QAHLSLAFQDLQVYCKRKSCDSDEQQSVLRTEEAVSGSPERPGEMFQVLLQSQEEPAPCR
YLLQEALVQRCPTLAVLAACVQGAELLPCLCVWVLTSVDDVTAKEATSHLAQAPQHHEWT
LHDLSIIWKTLLGRSHVRPLLRGFELFQRDCPLVLVLRMFELCCDFRNFAEAKSKLLDFQ
RTLITLRNGGPAPPGGLPLQWVESQASVLLLMMLQCCSSQYDLHRLLQLLADVDKLLKSN
GPDFRKLSQLSQLLQGSEVSLSPRLLQSSSPSVQQEEFQATVDALQARGCYSQARQVSQL
AGLPVHRLLLSQLLQEVSSQKSKRQWGRLETRVGFWKKCHEQLEADGTDPDPASKFFLSQ
AEAGDPGSLEALEDLLDIQERCLLLGLAAHWLSRITPAPVDKLESLEKEQWLSRIRKHIL
TVTMEKESVFNLPPPAVAPEMNTHEALMKEFSFSHITQLNTEGYLGLEGLPGPLDKQEEP
NAESALSPEERSVLAALIGQLLDDGSIHEASRVCRYFSLYHPDVWLVLRCRGLASGELSD
EPQEDASEAPARASITSSPSVSSLSSFVMLPLPEDEVAIQLQRLVDQCRHGNNYCKQVLS
LYQLSKELQCSFSSICREEPCSVLEKLLLSEQPERFRKARAFVKAQGLSADAVAELISSA
VVQALLAFTQELQPVVEKHIFRPLEGRDALVQLIKLCDDPNLVGLKLLEHLNSVPLRDLN
CIVELLIVAHDCFSVTCNMEGIVRVLQAARHLSHTYLAPGGHYSLLVRLLTGISRYNEMT
YVFDLLHQNHCFEMLLRKKVDTDRGQSSSLKSALLDYIKRCLPADSEKYNMVALCFTMRR
EIGENHEIAARTQLKMIESQAWVITPELKSSLVKVLGLLKDAAESFSKDSCVRQATRCVR
TAKLVALQLHFLNQGSDLRIINLRPAELLSAAMALPRCYQVFVVSEAYGYSPDWAEILYQ
KVVLNGDFGYLEELKRHRPLTSTLFEDIFKKLEGAPGSVTSNVKRLLTYCDDVYSRYRLA
YQQNLHDVTKMLLQDAKTSSYLSDRLGS |
NT seq |
7287 nt +upstreamnt +downstreamnt
atgttggaggtggatcagcggcttcaggctggatccacggaggtggctgtgatcccggag
aatcagcactgtggtgatgtagcggacatacggaaagccgagcttgctcctggaggctcc
ctgctcggatgtctgggtgtccgggggcagctggtggtgtgggacccggcggacagagag
gcttctccggctgcagtggagggcagctatcgagatttttcgtgggaggaggtgtccgtc
cactctcggggagtcggcggcttcaggctgctggctgtgggatctcagggtgacctgaag
ctgctggaggtcagggccgagcggtcggccttcatctccgtgctctgtgtgtgtgagtgt
cctgcagaccggctcctgcagaccgttagagaccaggaccccggtgtgagcgagctgcag
gtggtgcaggtgctgtcctttgtaactggccgctgctgcgttctgctgaactctgactgg
ttgctgcagctacagtggcagcaggaggaggaggagcctcagacgttatcctgctgcaga
gtccagctggccgacggcgactcgtgctctgctgtccatcactgcgtctccatggaaacc
ctgtttgccctcagctccactggactcatatctgtgtgcagcgtctctgatggcactctg
ctggccagcattaacctgcccgcctacctgagctccagcccggcagaggacgagctcacc
tccttccccttctcctcctctccctccttctgcctcctccaggtgtcggctgatctgagc
acagccgtggccgtcactcagtcccacgccgccgtcgccgtcgacctcaaccactacttc
aggatgtttccggaccacctgctgtgcgccgccccccggccacgcccccctcttcagccg
cagcaccccagagaccaggacagcctgtcgagctccggcttcagcatctcggccctggga
gcgaccttcagcgccgaccgctcctgggaggctcgtctcaccttcttgtacagcagagca
caacaggccactgctccttcctcctcttcctcctcttcatctcggcctcccaggacctcc
tcctggttctcctccctcccccacctggactcccacctggctccatcctcggcccacagc
agagtgcctccaggggggctgaccgtcgctttcgccgtccccgaatcatccgcttcatct
cagctcaccgtctccgagttctccgctctgctgaccttcgtccgcccaggaaaccaacag
accacagtggcattgtgggatatacgggagtacgggaacgtgagctaccaccaggcggcg
ggcgaggcggcgccggttcagcgctgtggagaacgacagcatcggctgctgctgaagaag
gccggtgtgttccaggtcctgttctccgtgtcgcagcaggacttgctcagcaggttgatg
ttgttcggcagcgcggcgacagtggacgcagtctgccacctgaacagctgggggcgctgc
tccatccccatccacgccctgcagactggactgaagaaccgtcagctggacacggtcgat
ttctacctgaagagcaaagaaaacgtcctgaaccctccggcggcagcgttcagctctgct
gatcatcccgccgcctccacactgagcctcacagacagagtgcaggagctgtgtcccgcc
ttagacctgctgtgttcggccgtcagagactcgaacagcgaagctcagagccgacagttc
tctgagcagctgctcaacatcaccctgagcttcgtgaacacgcagatccgctccgtgctg
tccaacacacaccacgaggactcggccatgcagagctgcataaatgttctggatcggtac
gtcgccgagctgaggagctacatgaagagattcccctgggctgcaggacccgatgtgtcg
gctaccagagctgctgctccggccaaggaggaggctcagcgggacgagtgggagcagctc
tcagcagaggaaatgatccatcagtccatcctgaccaatcagatccccagagctcaggcg
gtcctgcggagccagaaccggcctgaacgtcgcctgtcggctctgaggagggagggtctg
cggcaggttttctcctgcctgcagcgccgagacctggagaccaccaacacgctcctcgcc
aacatgggtttcagtgtgaagcagcagctccaccttatctgcctccacacggatgatgag
gagctgagggagctgatggtggaggagctgtccagacggagttacttcccagaggaggag
aaggagagtgttgagttcatcggggagatggagaagctggggtcgcagccggccgtccgc
tgcacaggaagtacctcgaatcaaggaatccaaaaacttcctgggactgttcggatggct
cgtaaagagggaggtggtgaggaggttctgaaagagctggaggtgcagaggaggcctcgg
gaagaggaggaggaggaggagcgggggggtctctggaggaaactgagactggactgggtg
aagaactgggaccagagctgccggacagccgtcctcctgtccagactgcagtacgcagag
ctcagagcctgcgacgctgcagtgctgtggcgttatctaaccgtcctgcacgaccagcgc
cgcgtggttgactggatccagaatacggagacctctggcgccccccggtggccggactta
accccagaactggtgaacgacagcacggcctgcagcagctacatgagggagaacatcctg
gacctgctggccaggagaggcgtgttcatcccggacgagctggcacacctggagcagctg
ctgtggaggctggctcagggtggaggcgtgatggcttcttctcctcccatccctcagtac
cgctctcccctcgggctcgacctccacggcgtcttcatcaccttctgtctggagcacaac
cttcagtacctgctctacacctacctggagcactacagactgacccccagaaactgctcc
ctcctgagcagtcagagcctctctgagcggcagccctggttcgaaatgctggtgcggatc
caggagatcaccagagatctgtcagatccaggactggtgttccaggccagtctaaccagt
gctcaggtgttattacctggcagccaggcgtctctcagcagtctgctgttagagggtcac
agtctgctcactctggctgccatcatgttcgcccccggaggaatcgaccaggtgatggct
cagggtgaaaggtcgggcaggtcggagaggacggtcgacccacagctgctgaagatggcg
ctggccccgcatcccaaactgagggccgccctgttccctgccgtcccccgaggaaacggc
ccgccctccgacatctccgtttaccacctgctgcagtccctccaccctctggacccatcc
aggctgtttggctggcaggcagcaaacacactcaactccacagaaacgtcggagctgcct
cacttctccagccctcacctggtccagaggtttgctctaaaagagaatctggactatctc
tacttcctccaccacggtcggccatctttcgcctacgccaccttcctcgtccagcagctg
agcggcagcggagacgtcaggctaacgttgcaggaggcctcgcggcgagcgtccaggttg
gccctgcagcgtttcaacatgccgtctgtggcgtcggccgccatttgcttctgtgagctg
ctgggagtctgcagcctcaagctgagggtcgacatcagagccatgaatgcaatcctgcag
cactggaaccaacacaacacacacagcagcccgacacagcatctgcacactctggtgtct
aaaggcgtgaagctggtggaggcggagcctggagcagcagaggagttgattggttacctg
gaagctgcagtaacagacagtttggagcagagaggcatcggcaggtcgtcgtacgaggcg
gctcaggagtgggcgctgcccgttcagttctgtcagctccacaatctgcagctgagctcc
gtttaccccgcccactgtgcccatgacggacagttcatccacttcctgttatttgtccaa
ctgcacaacttcccgcctcagcaggtgaggtcgctggcggctcagtttggccccaccctc
caggcccacctgagcttggcatttcaggacctgcaggtttactgtaagcggaagagctgc
gactctgatgagcagcaatcggttctgagaactgaggaggcggtctcagggagcccagag
cgccctggggagatgttccaggtgctcctgcagagccaggaggagccggcgccctgcaga
tacctcctgcaggaggcgctggtgcagcgctgcccgacactggcggtactggctgcctgt
gtgcagggagcagagctcctgccgtgcctttgtgtgtgggtgctgacctctgtcgatgat
gtcacggccaaggaagccacctcccacctggctcaagcgccccagcatcacgaatggacc
ctgcacgacctttccatcatctggaagacgctcctgggccggagccacgtgaggcccctc
ctgcgaggcttcgagctcttccagagggactgtcctctggtgttggtgctcaggatgttt
gagctgtgctgcgacttcagaaacttcgccgaggccaagtcgaagctgctggacttccag
cggacgctcatcactctgagaaatggtgggcctgcgccgcctggtggcctccccctgcag
tgggtagagagccaggcctcggtgctgctcctcatgatgctgcagtgctgctcctcccag
tacgacctccaccggctgctgcagctcctcgccgacgtcgacaaactcctcaaatccaat
ggtccagatttcaggaagctgagccagctgagtcagttgcttcaggggtcagaggtcagc
ctatctcccaggctcctgcagagcagttctccctctgtccagcaggaggagttccaggcc
accgtggacgctctgcaagcgagggggtgctacagccaggcgcggcaggtgtcccagctg
gccggcctgcctgtgcaccgtctgctgctcagccagctccttcaggaggtgagctctcag
aagtccaagaggcagtggggcagattggagacccgcgtcggcttctggaagaaatgtcac
gagcagctggaggccgacggcaccgatccagaccccgcctccaagttcttcctgtcgcag
gctgaggccggcgatccagggtctctggaggctctggaggacctgctggacatccaggag
cgctgcctgctgctcgggctcgccgcccactggctctcccggatcaccccggctcccgtg
gacaaactggagagcctggaaaaagagcagtggctcagccggatccgcaaacacatcctt
accgtcaccatggagaaggagagcgtctttaatctgccaccgccggccgtcgcccctgaa
atgaatacgcacgaggcgctgatgaaggagttctccttctcccacataacacagctgaac
accgaggggtacctcgggctggagggactgcccggtcccttagacaagcaggaggagcca
aatgccgagtcggcactgagtccagaggagaggagcgttctagccgctctgattggtcag
ctgttagacgacggcagcatccatgaagccagtcgagtttgccgttatttctccctgtac
cacccggacgtgtggctggtgctgcgctgcagaggcctggcatctggagagctgagcgac
gaaccccaagaagatgcctctgaagctcccgcgagggcgagcatcacgagctctccctca
gtcagcagcctgtcctcctttgtgatgctccccctccctgaagacgaggtcgccatccag
ctccagagactggtggatcagtgtcgccatggcaacaactactgcaaacaagtcctcagc
ctctaccagctctccaaggagctgcagtgctccttcagcagcatctgcagggaggagccc
tgctcagtgctggagaagctgctgctgtccgagcagccggagcgcttcaggaaggctcgg
gccttcgtcaaagctcagggtctgtctgcagacgccgtggccgagctcatttcctccgct
gtggttcaggcactgctggccttcacccaggagctgcagccagtggtggagaagcacatt
ttcagaccgttggagggcagggacgcgctggtgcagctgatcaaactatgtgacgacccg
aacctggtgggactcaaactgctggagcacctcaactctgttcctctgagggacctgaac
tgcattgtggagctgctgattgtggcgcacgactgtttcagtgtcacctgcaacatggag
gggatcgtgagagtgctccaagccgcccgtcacctcagccacacctacctggctccagga
gggcactacagcctgctggtccgtctgctgacaggtatcagcaggtacaacgagatgacg
tacgtcttcgatctgctgcatcagaaccactgcttcgagatgctgctgaggaagaaggtg
gacacagacagaggacagagctccagtctgaagtcggctctgctggactacataaagcgc
tgcctccccgcagacagcgagaagtacaacatggtggcactgtgcttcaccatgaggagg
gagatcggagaaaaccacgaaatagctgccaggacgcagctgaagatgatcgagtctcag
gcctgggtcatcacgccggagctgaagagctcattggtcaaagtgctgggtctgctgaag
gacgcggcagagagcttctccaaggattcgtgtgtgcgtcaggcgactcgctgtgtccga
acagctaagctggttgctcttcagctccacttcctgaatcagggatcagacctgcgcatc
atcaacctgcgacccgctgagctgctgagcgccgccatggcgctgccgcggtgctaccag
gtgttcgtggtgtcggaggcatacggctacagtccggactgggcggagattctgtaccag
aaggtcgtcctgaacggagactttggttacctggaagagctcaaacgccaccgcccactc
acctccaccctgtttgaggacattttcaaaaagctggagggcgctcccggcagcgtcacc
tccaacgtcaagcgcctgctgacttactgcgatgacgtgtacagccgctacaggctggcg
taccagcagaacctgcacgacgtcaccaagatgctgctgcaggacgccaagacgtcgagc
tacctgagcgacaggctgggcagctga |