Oreochromis niloticus (Nile tilapia): 100691919
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Entry
100691919 CDS
T06104
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X2
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl02010
ABC transporters
onl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100691919
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100691919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
100691919
Transporters [BR:
onl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100691919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
100691919
NCBI-ProteinID:
XP_013129929
Ensembl:
ENSONIG00000007557
LinkDB
All DBs
Position
LG3:13642518..13819231
Genome browser
AA seq
2244 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVIEVLWPLFLFFILVGVRTTTQPIYKGQCHYPNKA
MPSAGVIPWIQGMVCNLENPCLPYPTPGETPGQVNNFDNSIISGMLTELQTSLVDKSILS
RAKLLANGVDQWASILSQSNSANVILRNILRDNETFSTHLKQVLSVPPAVAESLMNARIQ
INPMMGIPRPDSLRSILCEGTDLDEYVQFRSQAEKKAFQNVSCSLTPQQLINTQQVLLQN
LDARKVLSELPAALNLNAADAAKLIGKTTANALPLIEEVARLQNSTAFKAASSLDFQGDL
IGSINMFLCGKQPDSNSTNMTLGLLSPRPMANKTSISITGNSSDAFCQTLVDTLESTPGL
RYIWSTFKPLLQGKVLYTPDTPAARLLVKEANSTFNALAMLRELADSWDELGPRVWDFLQ
NSSQVNNIRALLANPVFAGTLKAPLNGTGWTPELLANFLYNGPPEDRPPGMPPSDWRNVY
NSTSEMLKLLSTFLRCLDLDKFEVASTESQLVNRSLDLLRNGTFWAGIVFENLQLNSSLP
PPYVKYKIRMDVDEVESTRTVRRRSWTPGARDNPYNDLRYIWGGFAYLQDMIDHGIIRAH
TSKTQPLGVFAQQMPYPCYVDDAFVQSIGSILPMFLILAFMYTVSMTIKGLVLEKELRLK
EVLRAVGVQNSALWFSVFTENIVLLAIPCALISIMVKYGKILQYSDPSVIFVFLLVFCVA
TISQCFFISVFFSKANLAAACGGLIYFVLYLPHVLCYAWRDVMGFGAKVAVSLLSCVAFG
YGCENFSKFEEQGVGIQWRNIAKSPEDGGRYTFITSIIMMLIDALLYWLLTWYIENVFPG
QYGIPKPWYFLFTASYWRGTASVTDDKPSVLTDSNAHNEHMEKPPPNMTAGVSIHNLVKI
YKTGKKLAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIRTD
MDSIRTYLGMCPQHNVLFNELTVEEHIYFYARLKGRSRQEVKTEMDQMIKDVGLPNKRKE
LAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILST
HHMDEADILGDRIAIISHGKMRCCGSSIFLKKCFGSGYYLTLVRDGSGKMTAQRNGIIGQ
ARGGKKETDCPLSSSPDEGFGSQSWSNSDPSANLSAVGQLVQRHVPEAIFLESIGQEITY
ILPYGGAKDGTFGTLFRELDRAMANLGLTSYGISDTTLEEIFLKVAEDTGVDADIPPTKE
PFVRDSKRRSREAKRNSIASVHSKTEQTTRKSEKFTSKVADIRKSPSDSGRGSTVITGRK
LIRQQFLALFIKRFHHARRSRKGLIAQVVLPAFFVCLSLIFSLIVPPFNEFPPLELQPWM
YGLPQTTFYSNDGPGNTEVSQVVESLLNNPGFGTRCMKGDPIPNLPCSSTGSDWLTPSVD
QSVADIFLNGNWSMSNPSPGCECGTPKRTMILPDCPPGAGGLPPPQRIQNTTDTLLNLTG
RNMTDFLVKTFEKSGKTRYGGISVGAINSQVRVTEAAITDTFRDLKGLFSSAQDNVTDQV
YQSAETLLKNLGTRDNVKVWFYNQLRHAVVSFFSVANNGILRGNLPAGQDPRQYGISVTN
HPLNLSKEQLASAAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGV
NPAVYWLANFAWDMCNYIVPCFIVIVIFLAFQQQAYVSPPNLPALILLLIFYGWAITPMM
YPFSFIFSVPSTAYVVLTCINLFIGINSSVATFIMELFDDDNIIHINNIVKQVLLIFPHF
CLGRGLIDMAKNQAMATLYSNFGEDRFKNPLSWDMVGKNLCAMSIQGIVMFAVTILIQYK
FFCKPRLISGKWLPAEEEDIDVARERRRVYEGEAQSDLLRICDLTKVYPRKSTPAVDRLC
VGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRSVHQNMGYCPQ
FDALDELLTGREHLEFYARLRGVPAREVAMVAEWGVQKLGLAKYSNKSAGTYSGGNKRKL
STAIALIGCPPVIFLDEPTTGMDPKARRFLWDCILSVIREGRSVVLTSHSMEECEALCTR
MAIMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVQKTFPGSVLKEKHH
NTLQYQFPYAQGALANIFSQFTRHQRRLRVEDYSVSQTTLDQVFVNFARQQHDEEDSEAY
SNPVDVSDELPLEYLRTSQRAEKV
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctacggaagaga
caaaaggtgcgactggtcattgaagtactgtggcctctgtttctcttcttcatactggtg
ggggtgcggaccactacgcaaccaatttacaaaggccaatgtcactaccctaataaagcc
atgccatcagctggtgtgattccctggattcagggtatggtgtgcaaccttgaaaatccc
tgtttgccttatccaactccaggagagacaccaggccaagtcaataacttcgacaactcc
ataatttctgggatgttgacagagctgcaaacttccctggtagacaaatctattctcagc
agggccaagctgctagcaaatggtgttgaccagtgggcttcaattttgtcacagtctaac
tctgctaatgtcatcctgaggaatattctaagagacaatgaaactttctccacacatctg
aaacaagttttatcggtgccaccagcggtggctgaaagcctcatgaatgcccggattcag
atcaatccaatgatgggcatcccgaggccagacagcctgaggagcatcctgtgtgagggg
acagatctggatgagtatgtccaatttagaagccaagctgaaaagaaggcttttcagaat
gtcagctgctccctgactccacagcagctgattaacacccagcaagtactcctgcaaaac
ctggatgcaaggaaagtgctctctgagcttccagcagctttgaacctgaatgcagcagat
gcggcgaagctgataggaaaaaccactgcaaatgctttaccgctgattgaggaggtggcc
aggttgcagaactccacggcctttaaggccgctagttcactggatttccaaggcgacctg
attggcagtatcaatatgtttctgtgtggaaagcagcctgactccaattccaccaatatg
accctcggtttactctcacctagaccgatggctaacaagacgtcaatttccattacgggc
aacagttcagatgctttttgtcagactcttgtcgacaccctggagagcacacctggtctg
cgctacatttggagcaccttcaagccattattgcaggggaaagtcctctacacacctgat
acacctgctgctcgtctcctggtgaaagaagcaaatagcacctttaacgccttggctatg
ttaagggagctggctgactcttgggatgaactcggaccgcgtgtttgggattttctgcaa
aatagctcacaagtcaataatatacgggctctgctggcgaatcctgtgtttgctggtacc
ctcaaggcgcctctcaatggcacagggtggacacctgagctgctggccaacttcctgtac
aacgggcctccggaagatcgtccacccggcatgccacccagcgactggcggaacgtctac
aactccacctcggaaatgctgaagcttctctccactttcttgcgttgtttggatctggac
aagtttgaggtggcctccactgaaagccaactggtgaatagatcgctggatcttttgaga
aatggtacgttctgggccgggattgtctttgaaaacctccagctgaactccagcctccca
cctccttatgtcaagtacaaaatccgcatggatgttgatgaagtagaaagtaccaggaca
gtaaggagaaggtcatggactcctggagccagagacaacccctataacgacctgcgctat
atatggggaggcttcgcctacctgcaggatatgattgaccatggcattatacgggcgcac
acctcaaaaacccaaccactgggtgtttttgcccagcaaatgccgtatccttgctatgtg
gatgacgccttcgttcagagtattggaagcattctccccatgttcctgatactggccttc
atgtacaccgtgtccatgaccatcaagggtttggtgctggagaaggaactccggctcaag
gaagtcctgcgcgctgttggcgtgcaaaacagcgctctttggttttcagtgttcacagag
aacatcgttctgctagccattccctgtgcgctcataagtatcatggttaagtacggcaaa
atcctccaatacagcgacccctctgtgatctttgtcttcctcctggtgttctgcgtggcc
accatctctcagtgcttcttcatcagcgtcttcttctctaaggccaacttagcagcggcg
tgcggtggcctcatctactttgtcctctacctgccgcacgtcctctgctacgcctggagg
gacgtgatgggtttcggggccaaggttgctgtgagtttattgtcatgtgtggcatttgga
tacggctgtgagaacttttctaaatttgaggagcaaggcgtcggtattcagtggcgcaac
atcgccaagagtccagaagatgggggacgctacaccttcatcacatccatcatcatgatg
cttattgatgctcttttatactggctgctcacttggtacattgagaatgtctttccaggt
caatatggaatccctaagccgtggtacttcctttttactgcatcttattggcgtggaacg
gcatccgtgacggatgataagcccagtgtgctgacagactccaacgcacacaacgagcat
atggagaaaccgccacctaatatgacagcaggcgtctcaatccacaatcttgtcaaaatc
tacaagaccggaaagaagctcgccgtggacggactgagcgtggacttctacgagaaccag
atcacatcatttcttggccacaatggagctggaaaaacaaccacaatgtctattctgacg
ggactgtttccacctacatcgggaacggctctcatcaatggctacgacattcgcactgac
atggacagtatccggacatacttgggaatgtgtcctcagcataatgtcttattcaatgag
ctgacagtggaagagcacatttacttctacgcccggctcaaaggacgcagtcgccaagag
gttaaaactgagatggatcagatgattaaggatgtcggtttgccaaacaaacggaaagaa
cttgccaagaacctgtcgggtggcatgcagagaaagctgtccgtggccatcgcgttcgtc
ggtggctcgaaaatcgtcatcttagatgaacctacagcaggagtggacccctatgcccgc
aggggtatctgggaactgctgttaaagtacaaacaaggccgcaccatcattctgtccacg
caccacatggacgaggcagacatcttaggagatcgcattgccatcatctcccacggcaag
atgcgctgctgcggctcctccatcttcctgaagaaatgcttcggcagtggctactacctc
actctggtcagagacgggagtggaaagatgacagctcagcgtaacggcatcatcggtcag
gccagaggggggaagaaggagacagactgtcctttgagcagcagcccagatgaaggattt
ggcagccaaagctggagcaactctgatccatcagcaaatttgtcagcagtgggtcagctc
gtgcaaagacatgtccctgaggcaatcttcctggaaagcatcggtcaggagatcacctac
atcctgccctacggaggagctaaagacgggacctttggcacgctcttccgagagctcgac
cgagccatggccaaccttggcctcaccagctatggcatctcggacaccaccctggaggag
atattccttaaagtggcggaggacactggagtggatgcagatataccaccgacaaaggag
ccgtttgtgagagacagcaaaagaaggtcccgcgaagccaagaggaacagcattgccagc
gtccactcaaaaacagagcaaaccaccaggaagagtgaaaagttcacaagtaaagttgca
gacataaggaagagccccagtgacagcgggaggggatccacggtcatcaccggacggaag
ctgatcagacagcagttcctggcgctctttattaagcgcttccaccacgcccgaaggagc
cgcaaaggactcattgcccaggtggtcttgcctgctttttttgtctgcctgtctctgatc
ttctccctcatcgtcccgccgttcaacgaatttccacccctggagctgcagccctggatg
tatggcctgcctcaaaccaccttctatagcaacgatgggccaggaaatactgaggtgtcc
caggtggtggaaagcttgttgaacaaccctggctttgggacacgctgcatgaaaggagac
cctataccgaatctaccttgttcctccacggggtctgattggctcactccctccgtggat
cagtcagtcgctgacatctttctgaatgggaactggagcatgtctaacccctcccccggc
tgcgagtgcggcactcctaaacggacaatgatactgcctgactgcccgcccggtgcgggc
ggcctccctccgccacagaggatacagaacacgacagacactttgctgaatttaactgga
cggaatatgacggacttcctggtcaagacttttgagaagtccgggaaaacaaggtacgga
gggatctccgtcggagcaatcaactctcaagttcgtgtgacggaggcagcaatcacggat
acattcagagatctaaaaggcctattcagttcagctcaggataacgtgactgatcaggtc
taccaaagtgctgagacgctgctcaagaacctgggaaccagggacaacgtcaaggtgtgg
ttctacaaccagctgcggcacgccgtggtgtccttctttagcgtggccaacaacggcatc
ctgagaggaaatctgccagcgggacaggacccgcgccagtacggcatctccgtcaccaat
caccccctcaacctcagcaaagagcagctcgccagtgcggccatggccacaacctccact
gacgttgtggtgtccatctgcgttatctttgccatgtccttcatccctgccagctttgtc
ctcttcctaatccaagagagggtgaacaaagccaagcatctgcaatttgtcagtggagta
aacccagctgtctactggttggccaattttgcctgggacatgtgtaactacatcgtcccc
tgcttcatcgtgattgtgatcttcctcgccttccaacagcaagcctatgtttcccctcct
aacctgccggctttgattctcttgcttattttttatggctgggctatcacgcccatgatg
tacccgttctccttcatcttcagcgtgcccagcacagcttacgtggtgctgacctgcatc
aacctcttcattggtattaacagcagcgtggccacctttatcatggagctcttcgatgat
gataatatcatccacatcaacaacatagtgaagcaggtgctgctgatattcccacatttc
tgtctgggcagagggctgattgacatggccaagaaccaggcaatggccacactctacagc
aactttggggaggaccgtttcaagaacccgctgagctgggacatggtgggaaagaacctt
tgtgccatgtccatccagggaattgtcatgtttgccgttacaatcctcatccagtataaa
ttcttctgcaaaccaagacttatttcagggaagtggctgcctgcggaggaagaggatatc
gatgttgccagggaacggaggcgggtgtatgaaggcgaagcccagagcgaccttctgaga
atctgtgacctcactaaggtataccctcggaagagcacccccgctgtggacaggctatgt
gtgggcgttcctgccgcagagtgtttcggtttgctgggaatcaacggagctggaaaaacc
actacattcaagatgctgacaggagacatcccagtctccagtggagaggccttcctaaat
ggatacagcatccgaactgagatgaggtccgttcaccagaacatgggctattgcccccag
tttgatgctctcgatgagctgctgactggacgagagcatctggaattttacgcccggcta
cgaggggtaccggcaagagaggtcgccatggtggctgagtggggggtccagaagttgggg
ctagccaagtattccaacaagtcagcaggaacctacagcggcgggaacaagcgcaaactt
tccacagcgatagccctgatcggctgtcctccagtgatttttctggatgagccgaccacc
gggatggaccccaaagcccgacgcttcctgtgggactgcatcctgagcgtcatcagagag
ggacgctcagtcgttctcacatcacacagcatggaggagtgtgaagcgttgtgcacacgc
atggccatcatggtaaacggtcgcttcaagtgcctcgggagcatccagcatctgaagagc
agatttggtgatggctacactgtgattgtgagggtcggtggctctccgcccgcactgaag
ccagtcgaggacttcgtccagaagacctttccgggcagcgttctcaaagagaagcatcac
aacacactgcagtatcagtttccatacgcacagggagctttggccaatatcttcagccag
ttcaccaggcatcagcggaggctgcgtgtggaggactactcggtgtcccagacaactttg
gatcaggtctttgtgaattttgcgaggcagcagcacgatgaagaggactccgaggcctat
agcaacccggtggacgtttcagacgagctgccgttggagtatctgaggacctcccaaaga
gcagaaaaggtgtaa
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integrated database retrieval system
