| Entry |
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| Symbol |
vcp
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| Name |
(RefSeq) transitional endoplasmic reticulum ATPase
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| KO |
| K13525 | transitional endoplasmic reticulum ATPase |
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| Organism |
onl Oreochromis niloticus (Nile tilapia)
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| Pathway |
| onl04141 | Protein processing in endoplasmic reticulum |
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| Brite |
KEGG Orthology (KO) [BR:onl00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100691928 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100691928 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:onl03019]
100691928 (vcp)
03009 Ribosome biogenesis [BR:onl03009]
100691928 (vcp)
04131 Membrane trafficking [BR:onl04131]
100691928 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:onl04147]
100691928 (vcp)
Messenger RNA biogenesis [BR:onl03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100691928 (vcp)
Ribosome biogenesis [BR:onl03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100691928 (vcp)
Membrane trafficking [BR:onl04131]
SNARE
SNARE associated proteins
Others
100691928 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100691928 (vcp)
Exosome [BR:onl04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100691928 (vcp)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG12:complement(17544561..17553650)
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| AA seq |
806 aa
MASGGESKNDDLATAILKQKNRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVSILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSAAGG
SGPSHGSGGTGSNPVFNEDNDDDLYG |
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| NT seq |
2421 nt +upstreamnt +downstreamnt
atggcttcgggaggggaatccaaaaatgatgatctcgcaactgcaattctgaaacagaag
aacagacccaacagactgatcgttgatgaatccatcaatgaagacaacagcgtggtctcc
ctctctcagaccaaaatggatgagctgcagctcttccgtggagacacagtgctgatgaaa
ggaaagaagaggcgggagactgtgtgtattgtgttgtctgatgacacctgttctgacgaa
aaagttcgcatgaacagggtggtccgcaacaatctgagggtccgcctgggtgacgtcatc
agcattcagccatgtcctgatgtgaagtacggaaagaggattcatgttcttccaatagat
gacacagtagaaggaattactggcaacctgtttgaggtctacctgaagccatatttcttg
gaggcttacaggccaatccgcaaaggtgacattttcctggtcagaggaggaatgcgtgct
gtggagttcaaggtggtagagactgacccatccccttactgcatcgttgctcctgatact
gtcattcactgtgagggagagccaatccggagagaggatgaggaagagtccctgaatgaa
gtgggctacgatgacattggaggagtaaggaagcagttggctcagatcaaagagatggtg
gaactgccactcaggcacccagcgctgtttaaggccataggagtcaagccaccacgtgga
attctgctttacggaccccctggaactggaaaaactttgattgccagagctgtggccaat
gaaacaggagctttcttctttctgattaatggccctgagatcatgagtaagctggctgga
gaaagtgagagtaacctgagaaaggcctttgaggaagctgaaaagaatgctcctgccatc
atctttatcgatgagcttgatgcaattgctccaaagagagaaaagactcatggagaggtg
gagaggcgcattgtttctcagcttctgactcttatggatggcctgaaacagagagctcat
gtcattgtcatggctgccaccaacagacccaacagcattgatccagctctcaggagattt
gggcgttttgacagggaagttgacattggtatccccgatgctactggaaggttggagatt
ctccagattcacaccaagaacatgaagctggctgatgatgttgacttggaacaggtagcc
aatgagactcacgggcatgtgggtgcagatctggcagctctctgctctgaggctgctctg
caggccattaggaagaagatggacctgattgaccttgaggatgagaccattgatgctgaa
gtcatgaactctcttgctgtcaccatggatgacttcaagtgggctctgagccagagcaac
ccatcagccctgagagagactgttgttgaggttcccaacattacctgggaggatattggt
ggtctggatgatgtcaagagggagctgcaggagttggtgcagtacccagtggagcaccca
gacaagttcctcaagtttggcatgaccccatccaagggtgtgctcttctatggtccccct
ggatgtggtaagactctgttggccaaagccattgccaacgagtgccaggcaaacttcata
tctatcaaaggacctgagttgctcactatgtggtttggagagtctgaggctaatgtcaga
gagatcttcgacaaggctcgtcaagcagccccatgcgttctcttctttgatgagctggac
tccatagccaaggcccgtggtggcaacgtgggagatggcggtggagctgcagaccgtgtc
atcaaccagatcctgactgagatggatggaatgtcaagcaagaaaaacgtctttatcatt
ggagccacaaacagaccagacatcatcgaccctgccatcctgagacctggccgtctggat
cagctcatctacatccccctgcctgacgagaagagcagggtcagcatcctgaaggccaac
ctccgcaagagtcccatcagcaaggatgtggacttggacttcctggctaagatgaccaac
ggcttctctggagctgatctcacagagatctgccagcgggcgtgtaaactggccatcagg
gagagcattgaaaatgagatccgcagagagagggagaggcagaccaacccatcagctatg
gaggtagaagaggatgatcctgtaccggagatcaggaaggaccactttgaagaggcaatg
cgatttgctcgccgctccgtcagtgacaatgacattcgcaaatacgagatgttcgctcag
acactgcagcagagccgtggctttggcagcttcaggtttccctccagtgctgcaggcggc
agtggtccaagccatggctctggtggaactggaagcaatccagtgttcaacgaagataat
gatgatgacctgtatggataa |
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