Oreochromis niloticus (Nile tilapia): 100691944
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Entry
100691944 CDS
T06104
Symbol
rbm17
Name
(RefSeq) splicing factor 45 isoform X2
KO
K12840
splicing factor 45
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100691944 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100691944 (rbm17)
Spliceosome [BR:
onl03041
]
Complex A
U2 snRNP components
U2 related factors
100691944 (rbm17)
Complex B
100691944 (rbm17)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
100691944
NCBI-ProteinID:
XP_003455748
Ensembl:
ENSONIG00000011838
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All DBs
Position
LG17:complement(35245614..35261911)
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AA seq
403 aa
AA seq
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MSLYDDLGVGASDTKTEGWSKNFKLLQSQLKVKKAALTQAKTQRMKQTTVLAPVIDLKRG
SSSDERQITDAPPHVAAGLKDAVPSGFSASDVLIPLADEYDPMFPNDYEKVVKRHREERQ
RQREQERQKEIEEREKKRKDRHESGAPSGFSRFPAAEEDSDEEEEYEKERRKRSMGGAAI
APPSSLVDRDGSSYSYEDEGRPARGSKAAIPPPMYEDSDRPRSPPGPTSSFLANMGGTVA
HKIMQKYGFKEGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDAAEKPDSSKKSDANPLTE
ILKNPTKVVLLRNMVGRGEVDEDLEGETKEECEKYGKVVKCVIFEIAEVPDDEAVRIFLE
FERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLGEQV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctatgatgaccttggtgtgggtgccagtgacactaagaccgaaggctggtcc
aagaacttcaagctactacagtcccagctaaaggtgaagaaggcggctctgacacaggcc
aagacccagcggatgaagcagaccactgtcttggcgcctgtcattgatcttaagagagga
agttccagtgatgagcgacagatcacagacgctcctccacatgttgcagctggtctcaag
gatgcagtccccagtggcttctctgctagcgatgtgctgatccccttagcagacgagtat
gaccccatgttccccaatgactacgagaaggtggtgaagcgtcacagagaagaacggcag
cgacagagggagcaggagcggcagaaggaaattgaagagagggaaaagaaaaggaaagac
agacacgaaagtggagctcccagtggtttctctcgtttcccagcagcagaggaagactcg
gatgaggaggaggagtacgagaaggagaggaggaaaagaagcatgggtggagcagccatc
gcccctccatcttccctcgtggacagagatggctcttcatattcctatgaagatgagggc
cgtcctgccagaggctcaaaggcggccattcctccacctatgtatgaagactcagaccgg
ccacgctcaccgcccggacccaccagctccttccttgctaacatgggaggtacagtggcc
cataagattatgcagaaatatggcttcaaagaaggccagggcctcggcaagcacgagcaa
ggcctcagcacggcgctgtctgtggaaaagaccagcaagagaggtggaaagatcatcata
ggtgacgcagcagaaaaacctgactcctccaagaagtctgacgcgaacccactcactgag
atcctgaaaaacccgaccaaggtggtcctgctgaggaacatggtggggcgaggagaggtg
gacgaggacttggagggagagacgaaagaggaatgcgagaaatacggcaaagtagttaaa
tgtgtcatttttgagattgcagaggtgccagatgatgaagccgtcagaatatttctggag
tttgagagggtggagtcggccatcaaagctgttgtggatctaaacggacgatatttcggt
gggcgagttgtcaaggcctgcttctacaatctagacaagtttcgggttttggaccttggc
gagcaggtttga
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