Oreochromis niloticus (Nile tilapia): 100692093 Help Entry 100692093         CDS       T06104                                  Symbol rfc1 Name (RefSeq) replication factor C subunit 1   KO K10754   replication factor C subunit 1 Organism onl  Oreochromis niloticus (Nile tilapia) Pathway onl03030   DNA replication onl03410   Base excision repair onl03420   Nucleotide excision repair onl03430   Mismatch repair Brite KEGG Orthology (KO) [BR:onl00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     100692093 (rfc1)    03410 Base excision repair     100692093 (rfc1)    03420 Nucleotide excision repair     100692093 (rfc1)    03430 Mismatch repair     100692093 (rfc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:onl03032]     100692093 (rfc1)    03400 DNA repair and recombination proteins [BR:onl03400]     100692093 (rfc1) DNA replication proteins [BR:onl03032]  Eukaryotic type   DNA Replication Elongation Factors    RFC (replication factor C)     100692093 (rfc1) DNA repair and recombination proteins [BR:onl03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     RFC (replication factor C)      100692093 (rfc1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RFC1 BRCT AAA PTCB-BRCT AAA_22 AAA_30 BRCT_2 AAA_5 RuvB_N AAA_14 Rad17 AAA_17 AAA_33 AAA_16 AAA_18 nSTAND3 AAA_7 RNA_helicase NTPase_1 AAA_19 Motif Other DBs NCBI-GeneID:  100692093 NCBI-ProteinID:  XP_013131181 Ensembl:  ENSONIG00000008987 UniProt:  I3JR06 LinkDB All DBs Position LG6:22134879..22145004 Genome browser AA seq 1169 aa AA seqDB search MDIRRFFAPTSAKPAVQKPAPNGNDKQEKKKKNSLSTDEEVKKKKKEANKVKSKKSEEQR KDGEKKRKKHAVIASDSDEEEPVRKSKSPKEKAKTNKKDPVQYVSETDSDSDNFQSLKKT SKSKQNGAAKTTKADAASSRLEAKQSGKSPVKPSSTQGKTTPKSPPVPSTPKSAPPPQPK QTPTSVLDYFGSASVQRSDKKLVASTKRKAPTLADDLISDEEIARQLQMEEDMELEKQVH EDEEFARTLAMLDEEPKAKKARKGSDEKQILTTSPKKKATDAAAPGSSSKTSVSEDVVSP SPKKTTAPVKASSKLAMMKKKDDDKNEGVKSKTPTKMKISPKKEPHASSISEKTFTPKTG TTPTALKTSPKKPESTSTSPDDQEKKKANSSAYRNFLNRDGPRALGSKEIPKGAENCLEG CVFVLTGVLESMEREDAKSLIERYGGKVTGNVSKKTTYLIQGRDSGASKLEKAESFGTQI LDEDGLLELIRTKPGKKSKYEIAAEAESKTTKTKTPPSQASKSTPKAQKISPSKGNSRSP HTPSPSKTGQAQGRGTKTRDGRTPPGRGSGQTARRELGLSSCASSSSVPEQSSPSPTEEC GSLLWVDKYRPRSLKAVIGQQGGQSCANKLLRWLQNWYKNHGSGSGKPAAARFGKFGGKD DGSGFKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVVAESLNNTSI ENFYKGTSQTVSSKHVLIMDEVDGMAGNEDRGGIQEMIGLIKNSKIPIICMCNDRNHQKI RSLANYCFDLRFQRPRVEQIKGAMMSIAFKEGIRIPPPALNEIILASNQDVRQVIHNLSM WSAKDKVMTYDQCKSDAASARKDMKLGPFDVCRKVFASGEETARMSLIDKSDLFFHDYSL APLFVQENYLHVRPAAAGGNLKSHLVLLSKTADSICDGDLVDRRIRSRQNWSLLPTQAIY ASVLPGELMRGYMNQFPIFPSWLGKNSSTNKHSRIMQELSSHMSLKTLSSKQAVNLDYLH YLRQAILNPLQKHGAEGAAEAVQLLDDYQLIKEDVDSIMEISVWGGQPDPYSKLDSKVKA AFTRAYNKEVHLTPYSLQVVKKGRRGGGGDFEGGEEISQEDPESEDEGEGLKADAMIKQK KAKPTKESNKEKKEDSGKGKGKGKGKAKK NT seq 3510 nt NT seq  +upstreamnt  +downstreamnt atggacatcaggcggttctttgcaccgacatcggctaagcctgcggtgcagaaacctgcc ccgaatggaaatgacaaacaggagaagaagaagaagaattccttgtcaacggacgaggag gtgaaaaagaagaagaaagaggccaacaaggtcaaaagcaaaaaaagtgaggagcaacgc aaggatggggagaaaaaacgaaagaagcacgcagtcatagcctcagactcagatgaggag gagccagtgaggaagtcgaaatcccccaaagagaaagcgaagacgaacaaaaaagatccc gtgcagtacgtctctgaaacagactcggacagcgacaacttccagtccttgaagaagact tccaaatccaaacagaacggcgccgcaaaaacgacaaaagcggacgccgcgagctctcgt ctggaagccaaacagtcggggaagtctcccgtcaagccatcctccacccagggaaaaacc acaccaaaatctcctcctgtgccttccaccccaaagtcagctccgcctcctcagcccaaa caaacccccacatcagtactcgattactttggcagcgcgagtgttcagcgctcggacaag aagctggtagccagcaccaaacgaaaggctccgactctggcagacgacctgataagcgat gaagaaatcgccaggcagctgcagatggaagaggacatggagctggaaaaacaggtccac gaggatgaggagtttgccagaacgctggccatgctggatgaagagccaaaagcgaagaag gctcgcaaaggctctgatgaaaaacaaatcttgaccacgagccccaaaaagaaagccaca gacgctgccgcccctgggagcagctcgaagaccagcgtgtctgaagatgtggttagtccg tctcccaaaaagaccacagctcctgtaaaagccagctccaaactggccatgatgaagaaa aaggatgatgacaagaacgaaggggtgaagagcaaaacccctactaagatgaaaatttct cccaaaaaggagccccacgcttcatccatctcagagaagacgttcacccccaaaactgga accacgcccaccgcactcaagacttctcccaagaaaccggagagcacgagcacaagccct gacgaccaggagaagaagaaggccaactcttcagcttacaggaacttcctgaacagagat ggaccacgagctctgggctcaaaggaaatcccaaagggagcagaaaactgtttggagggc tgcgtgtttgtcctgaccggcgtcctcgagtctatggagagagaagacgccaaatctctc atcgagcgatacggaggcaaggtgacgggcaacgtcagcaagaagaccacctacctgatt cagggccgagacagcggtgcatcgaagctggagaaggcagagagcttcggcacccagatc cttgacgaagacggtctgttggagctgatcagaacaaagccaggaaagaagtccaagtat gagatcgctgcggaagctgagagcaaaaccacaaagaccaagacgcctccaagccaggct tcaaagagcaccccgaaggcccagaagatctctccctctaagggtaattccaggtcacct cacaccccgagcccttcaaagaccggccaggcacaaggccgcggtaccaagaccagagac ggaaggactccacccgggagaggctcgggtcaaactgcgcgaagggagctgggcctttcc tcttgtgcctcttcttcttctgtcccagaacaatcatctccatcacccacagaagagtgt ggcagcctgctgtgggtggacaagtaccgtccacgctctcttaaggctgtgattggccag cagggcggccagagctgtgcaaacaagctgctgcgctggctgcagaactggtacaaaaac cacggcagcgggagcggcaaaccagcagcggctcgatttggtaagtttggagggaaagat gatggctcaggattcaaagccgctctgctctccggaccgccaggggtggggaagaccacc acagctgccctggtctgcgaggagctgggcttcagttatgtggagatgaacgccagctgc actcgcagcaaaaacagcctgaaggaggtcgtcgccgagtcgctgaacaacaccagcata gagaacttctacaaaggcacgtcacagacagtgagcagtaaacacgtgctgatcatggac gaggtcgatggcatggctggcaacgaggaccgcggaggaattcaggaaatgatcggcctt attaaaaattcaaagatccccatcatctgcatgtgcaatgatcggaaccaccagaagatt agatctttggccaactactgcttcgatctgcgcttccagagaccgcgagtggaacaaatc aagggagccatgatgtccattgctttcaaggagggaatcaggatcccgcccccagctctt aacgaaatcattttagcctccaatcaggatgtccgacaggtgatccacaatctcagcatg tggtcagccaaggacaaggtgatgacgtacgaccagtgcaagtccgacgcagccagcgca cgcaaggacatgaagctcgggccgtttgacgtctgcaggaaggtgtttgcctcgggggag gagacggcccgcatgagcctcattgacaagtcggacctctttttccacgactactcgctg gcgccgctgttcgtccaggagaactacctgcacgtgcgcccagctgctgcaggtggcaat ctgaagtcccacctggtgttgctcagtaagacggctgactccatctgtgacggcgatctg gtggatagacggatccgctcaagacaaaactggtcactgctacccacccaggccatttat gccagtgtgttaccaggcgagctcatgagaggctacatgaatcaattcccgatcttcccc agctggctcggcaagaactcctcgaccaataaacactcgcgcatcatgcaggagctgtcc tcgcacatgagtttaaagacactgagcagcaaacaggcggtcaacctggattacctgcac tacctgcgacaggcgattctaaatccactccagaagcacggagcggagggcgctgccgaa gccgtgcagctgctggacgactatcagcttatcaaggaggacgtggacagcatcatggag atcagcgtctggggaggacagcccgacccctactccaaactggactccaaggtaaaggcc gcctttacgcgggcatacaataaagaggtccacctaacaccatactccctgcaagtggtg aagaaaggccgccgtggtggcggaggggactttgagggaggggaggaaataagccaggaa gatccggagtctgaagacgaaggagaggggctcaaagccgacgctatgattaaacagaag aaggccaaacccaccaaggagtcaaacaaggagaagaaggaggattctggaaagggcaaa ggcaagggcaaaggcaaggctaagaaatga

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