Oreochromis niloticus (Nile tilapia): 100692114
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Entry
100692114 CDS
T06104
Symbol
vps50
Name
(RefSeq) syndetin isoform X2
KO
K23288
syndetin
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100692114 (vps50)
Membrane trafficking [BR:
onl04131
]
Protein recycling
Others
EARP complex
100692114 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
100692114
NCBI-ProteinID:
XP_003457313
Ensembl:
ENSONIG00000010824
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All DBs
Position
LG22:24123901..24238002
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AA seq
967 aa
AA seq
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MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRHLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQETTPTPED
AAAAESDELAVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSRQAVSSTSPAQEELSLFQQYQREGNPFEMHMEHKEEETED
VLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPLKSVPRETMRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMYESSGLGLISSRLRTTLNRIQESLIDMEAVGENAGVHGPAEDRKEKVPSPHLSQLVVL
TNSGTLYGLAQRVVATESLVFLAEQFESLQSHLDTMMPAAKKPFLQQFYSQTVSTASELR
KPIYWIVAAKAIDYEQMLLMMAGVKWDIREIMSQHNVYVDVLLKEFEQFNKRLGEVSRHV
RIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPI
PDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtctcttatggcccgtcagggcctgaaaagcccccaggagagcatg
gcagacctgagtcctgtggagaacctgagaatcccgagcaaggaggagctgcgggagctg
agggagcagcccatcgacccccaggcggagcaggaaatcatcgacagcatcgaggaggtc
tacttctcaaatgactccttcgacatggtgcagcatgaactggagaaactcccgcccgag
ttgaacctgcaggagttggaggaatacagagacaaacttaaaaggcaacaggcagcagtt
tccaaaaaggtcgccgatctcattctggagaaacagcctgcttatgtgaaggagctagag
agagtgacggcgttacagaccaacctgcagctggcagcagtcatttgcactaatgcaagg
aggcaactgagtgtggccaaggagggattcaccgaggccagcctcggtctcctggccaat
cagagaaggcgacacctgctaacaggcctgctcaagtctctgaggaccatcaagaccctg
caaagaacagatgtaagactcagcgagatgctcgaggaagaagattatccaggtgcaatc
cagctgtgtctggaatgtcagaaggccgccagcacctttaaacactacagctgcatcagc
gagttgaattccaaactacaagacactctggagcagatcgaggagcagcttgacgtcgct
ctgtcgaagacttgtaagcacttcgatgtctcgcactacaccaaggtccagctggcctac
acgctactggggaaaacacagactgcgatggaccagttacacatgcacttcacccaggcc
atccacaacacagtgttccaagttgtgctgggatacgtggagctgtgcgccggcaatgcc
gataccaagttccagaagatgcagtataaggacctgtgcacgcatattaccctggacagc
tacattccctgcctgacagatctgtgtaaggcattgtgggaggtgatgctaagctaccac
cgtaccatgcagtggcatgaggagcacgacaaacaggagaccacacccactccagaggat
gctgctgccgccgagtccgatgagctggccgtggaccgcagttacgtgaagaagaagttg
gagcatggactgacacgaatctggcaggatgtccagttgaaagtgaaggcctacatcctg
gggacagacatgtctaacttcaaatacgatgatttcatagtggtactggatgtcatcagc
aggttgatgcaggtgggtgaggagttttgtggcagtaagtctgaggtcctgcaggagtcc
atcaaacgccagagtgtcaactactttaaaaactaccacagggcccgactggaggagctg
aggatgtttctggaaaatgagacgtgggaactgtgtccagtcaagtctaactttaacata
gcccagctccatgagtttaagtttatgggtcagtgtcgctcgccttcggtgtccccgagc
aggcaggccgtgtcttcgaccagcccggcccaggaggagctgtccctgttccagcagtac
cagcgagagggaaacccctttgagatgcacatggagcacaaggaagaggagacggaggat
gtgctggcatccaatgggtacgagtcagacgagctggagaaaagcgtgtaccaggattac
gacagcgacagcgatgtcccagaggagctcaagcaggactatgttgatgagcagacgggt
gatgctcctctaaagagcgtaccccgagaaaccatgagaagcaagaagaagtccgactac
aacctcaataagaccaacgcaccaattctcaccaacaccaccctcaacgtcatccggctt
gttggaaagtacatgcagatgatgaacattttgaagccaattgcctttgacgtcatccac
tgcgtatcacagcttttcgactactacctttacgctgtgtacactttctttggacgcaac
gacatgtatgagtcatcaggtctgggccttatcagcagcagactgagaaccacactgaac
cggatccaggagagcctcattgatatggaggctgttggggagaacgcaggggtgcatggc
ccagcagaggacaggaaggagaaggtgcccagcccccatctcagccagctggtggtcctc
actaacagcgggacactctacgggctggcacaaagggtggtggccacagagtctcttgtg
tttctggcagagcagtttgagtccttgcagtcccacttggacacgatgatgcctgcagcc
aagaagcccttcctgcagcagttttattcgcagacggtgtctacagccagcgaactgcgg
aaaccaatttactggatcgtggcggccaaggccattgactatgaacaaatgttgctcatg
atggccggagttaaatgggacattagggagataatgtcccagcacaatgtatatgtggat
gtcttgttaaaggagtttgagcaatttaacaagcggctgggtgaagtttccagacatgtg
cgcatccccctgcctgtgtccaacgtcctgtgggaacactgcatccgtttggccaacagg
actcttgttgagggctatgctaatgtaaagaaatgcagcaatgagggccgggccctgatg
cagctggattttcagcagttcctgatgaagctggagaagctgactgacctgcgccccatc
cctgataaggagtttgttgaaacctacattaaggcctattacctgactgaaaatgatatg
gagcagttcatcaagaatcacagggagtactccatgaagcagctagccaacttggtgaac
gtttgtctcggttcacatataaacaaaaaggctcgccagaaacttctggcagccatcgat
gacattgacagacccaagagatag
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