Oreochromis niloticus (Nile tilapia): 100692171
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Entry
100692171 CDS
T06104
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100692171 (taf1b)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100692171 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
100692171
NCBI-ProteinID:
XP_019201660
Ensembl:
ENSONIG00000018809
UniProt:
I3KRD7
LinkDB
All DBs
Position
LG15:complement(25312832..25319333)
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AA seq
643 aa
AA seq
DB search
MDDEHTAEYTVPCAQCSAVDWGISDEGRFYCRSCHNVIERTREVVDLSFLKLSSRVSTIR
GPRKKQAERGHVWMVCEGFQFILKNQADALLALGVSPQFKDDVLCPLWRCYLQKSRQAYT
HDPVRSCKFRVRAVGSDSESASEAISCTDGESNPASTAGSNTENSGFWSGSSDTLTYLSA
RKKRSQSLLSMKKTLALIYLALVWSREALTLSDLLRLVNEGHIPYLNAYEQLPEEMKVTG
KDSLIFIVETVPSHHAVHKEAETIIQFLQLPAFPPVSRQTLLHPALLSLRYLSDVNLPDE
LHPWVCRLLEHTGMMDQTLHTFDPHNHPTLPRYDLQAAALIIVTLKLFFCLDDMTEWHLS
NDLGRPKDSGKVFNLRRWYKVMEAALIQAQERRDQNVSRKQWKSKKQIYPNKKEKCSMIK
KQRIAEQVQLCFEKLTSCPSGLQDVGPSSFIFCWGDEEKSDGPSLHHMKLDEVVTHRCDF
LTPLNDMYWHPALRRCLCYNSHYKEVEATLPRSFIWLLQLFAFMFDVKPFCLYEEVLSVE
RRIFDTRLYRGKSKADAGASAEAAGASPEAQASLNIRTSPRMTRTSPRMTRTSPRMTRTS
PRMTRTSPRMTRTSPRMTRTSPRTAEVSLGNQASRRKRQRSRS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacatacggccgagtacacggtgccctgtgcccagtgttctgcggtggac
tggggcatttcggacgagggtcgcttctactgcaggtcctgccacaacgtgatcgagagg
acccgggaggtggtggacctgtccttcttaaagttgtccagcagggtgtcaaccatcaga
ggaccccgcaagaagcaggccgagcgtggtcacgtgtggatggtctgcgagggtttccag
ttcatcctgaagaaccaggccgatgctctgctcgcgctcggagtcagtcctcaatttaag
gacgacgtgctgtgtcctctgtggaggtgttacctgcagaaaagtcgccaggcctatacc
cacgaccctgtgaggagctgcaagttcagagtgagagccgtgggttcggactcggagagc
gccagcgaggcaatcagctgcacagacggcgagtcgaacccagcaagcacagcgggctca
aacacagagaactccggtttttggtccggctcctcggacaccctcacctacctgtcggcc
aggaagaagcggagccagagtctgctgagcatgaagaagacactggcgctgatctacctg
gctctggtatggagccgtgaggcgctgacgctcagcgacctgctcaggcttgtgaatgag
ggtcacatcccgtacttgaacgcctatgagcagcttcccgaggagatgaaagtcacaggg
aaggactccctcatcttcatagtcgagacagtcccgtctcatcacgccgttcataaggag
gccgagactatcattcagttcctgcagcttcctgcttttcctccagtcagtcggcagacc
ctgctgcacccggcgctgctcagcctcagatacctgtccgacgtcaacctgcccgatgag
ctccacccctgggtctgcaggctgttggagcacaccggtatgatggatcaaacgctccac
acatttgacccgcacaatcaccccaccctgccgcggtatgacctgcaagccgctgccctc
atcatcgtcactctgaagctgttcttttgcctggatgacatgaccgagtggcatctgtcc
aatgaccttggacgaccgaaggactcaggtaaggtgtttaacctgaggaggtggtacaaa
gtgatggaggccgctctgattcaagctcaagagaggagagaccagaatgtctccaggaag
cagtggaagtcaaagaaacaaatttacccgaacaagaaggaaaagtgttcgatgattaaa
aaacaaagaatcgcagagcaggtccagctgtgtttcgagaagctgacttcctgtccgtcg
gggctccaggacgtaggaccatcgagcttcatattctgttggggggacgaggagaaatcg
gacggtcccagtctgcaccacatgaagctggacgaggtcgtgacccatagatgcgacttc
ctgactccgctgaacgacatgtactggcacccagcgctcagacgctgcttgtgctacaac
agtcattacaaggaggtggaggcaacgctgccacgctccttcatctggctgctgcagctt
ttcgccttcatgttcgatgtgaagccgttttgcctctatgaggaggtgctgagtgtggag
aggaggatctttgacaccagactgtacagagggaagagcaaggctgatgctggggcttca
gctgaggccgccggggcttcacccgaggcccaggcttcactcaacatccggacgtcacca
aggatgacccggacgtcaccaaggatgacccggacgtcaccaaggatgacccggacgtca
ccaaggatgacccggacgtcaccaaggatgacccggacgtcaccaaggatgacccggacg
tcacccaggacggctgaggtttcactcgggaaccaggcttcacgcaggaagcggcagaga
agtaggagctga
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