Oreochromis niloticus (Nile tilapia): 100692364
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Entry
100692364 CDS
T06104
Symbol
kcnma1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X32
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
100692364 (kcnma1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100692364 (kcnma1)
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
100692364 (kcnma1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
100692364
NCBI-ProteinID:
XP_003452055
Ensembl:
ENSONIG00000018524
LinkDB
All DBs
Position
LG13:complement(16277923..16425901)
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AA seq
1204 aa
AA seq
DB search
MLAEADGTVPHGSDSSMRTSNINNNINPDSSILISRMADVVIPYSSEVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKEAQKVNNPANNQAADRAPKGPDE
KEEAPANEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYARTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPMVCELCYVKLK
LLLIAIEFKSEQRESSILINPGNHVKLQEGTLGFFIASDAKEVKRAFFYCKACHDDITDP
KRIKKCGCKRLEDEHPSTLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIENMDM
NVKRYDSTGMFHWCPSKDIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPL
RASNFHYHELKPIVFVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCV
ILSANQNNIEDASLQDKECILATLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDSSPV
HGFVRQASVTTGSNIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLD
SLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCRVAQLA
LYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLGAPSQCTKRYVITNPPYEF
ELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPPSNRQNRSSKTRES
REKQNATRMNRMGQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQYKSTSSLIPPIREV
EDEC
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaggcagatggcacggttccccatggaagcgacagctctatgaggacaagc
aatatcaataataacataaatccggactcttcaatcttaatatcgaggatggcagacgtt
gtcatcccgtactcgtccgaggtgccctgcgacaataatggccagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgttttttgggggtctcttcatcattctgctatggagg
accctcaaatatctgtggactgtttgctgtcactgcaacattaaaaacaaggaggctcag
aaggtgaacaaccccgccaacaatcaggcagcagacagagcaccaaagggccctgatgag
aaggaggaggcgccagccaatgaagtgggatggatgacttcagtcaaagactgggccggt
gtcatgatctccgctcagacactcactggcagagttcttgtggtgttagtctttgcactc
agcatcggggcccttggaatatactttatagactcctcagatcctatagaatcctgccag
aacttctacaaagatttcacgttacagattgatatggccttcaacgtattcttccttctt
tactttggcctgcggtttatagcagccaatgacaagctgtggttctggctggaggtcaac
tcagtggttgacttcttcactgttcctcctgtgttcgtctctgtctacttaaacagaagc
tggcttggtttaagattcctgagagcactaagattgatacagttctcagaaattttgcaa
ttcttaaatatcttgaaaacaagcaattccatcaagctggtgaacctgtgttccatcttc
ataagcacatggctcacagctgctggattcatacatttggtggaaaactcaggggatcct
tgggaaaacttccaaaattcccagtcactatcatattgggaatgtgtctacttgctgatg
gtgactatgtctacagtgggctacggggatgtctatgcaagaaccaccttggggcgcctc
tttatggtcttcttcatccttggcggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccattttacccaagtagagttctaccag
ggatcggttctcaaccctcatgatctggctcgagtgaagatcgagtcagcagatgcctgc
ttaatcctagccaacaagtactgtgcagatcctgatgctgaagatgcctccaacatcatg
agggtcatttccatcaagaactatcaccccaagatcagaataatcacacagatgctgcag
tatcacaataaggcccatctactgaatattccaagctggaactggaaggagggtgacgat
gctatctgcttggcagagctgaaggcaggcttcattgcgcagagttgtctggcccagggc
ctgtcgacaatgctagctaacctcttctccatgaggtcctttattgagatcgaggaggac
acatggcagaagtattaccttgaaggagtggctaatgagatgtacacagagtatttgtcc
agtgcctttgtaggcctctccttccccatggtctgcgagctgtgttacgtgaaactgaag
ctgttgcttattgccattgaattcaagtctgagcagagagagagcagcattctcatcaac
ccgggcaaccatgtcaagctgcaggagggaacactgggattttttatcgctagtgatgcc
aaagaagtaaaaagagcatttttctactgcaaagcttgtcatgatgacatcacagacccc
aaacggatcaagaagtgcggctgcaagcgactcgaagacgagcatccgtcaacgctctcg
cccaaaaaaaagcagcgcaacggagggatgcgaaactcacccaactgctcgcccaaaatg
atgagccgacacgacccccttctaattcctggaaatgaacaaattgagaatatggacatg
aacgtgaagaggtatgactcgacagggatgtttcactggtgcccttcaaaagacatcgaa
aaagtcatcctgacccggagtgaagcctccatgacagtgctaagcggccatgtagtggtc
tgtatatttggggatgtcacgtccgctttagtggggctgcgaaacttggtgatgccttta
agagccagcaacttccattaccacgagctaaagcctatagtttttgtgggctcgctggat
taccttcggagagagtgggaaactttacacaacttccccaaggtctccatcttacctggt
acaccattaagtcgggcagatttaagggctgtcaacatcaacctctgcgacatgtgtgta
atactgtcagccaatcagaacaatatcgaagatgcctctctgcaggataaggaatgcatc
ttggcaacactcaacatcaaatctatgcagtttgatgacagcattggggtcttacaggct
aattcccaaggtttcacgcctcctggaatggacaggtcatctccagacagcagtccagta
catggcttcgtgcgtcaggcatctgtcaccaccggatccaacatccccatcatcacagaa
ctagtgaacgactcaaacgttcagttcctggaccaagatgatgatgacgacccagacaca
gagctgtacctcactcagcccttcgcctgcggcaccgccttcgctgtcagtgtactcgac
tccctgatgagtgcgacatactttaatgataatatcctcacgctgattcgaacgctggtc
acagggggagccacgccagagctggaggctctgctggctgaagagaatgctctcagagga
ggctacagcacaccgcaaactctggccaacagagacaggtgtcgcgtcgcccagctagcc
ctctacgacgggccatttgccgacttaggggatggcggctgctatggagatttattctgc
aaagcactgaagacgtacaacatgctgtgttttggaatctacagattaagagatgcacat
ctcggtgcaccaagccaatgtacaaaacgatatgtgatcacaaaccccccgtacgaattt
gaactggtgcccaccgacctgatcttctgcctaatgcagttcgaccacaacgccggccag
tcccggacaagtttgtcccactcttcccactcctcccattcctccagcaaaaagagctcg
tccgtgcactccatccccccatcgaatcggcagaaccgcagcagcaagacccgggagtcc
cgcgaaaaacagaatgcaacaaggatgaatagaatgggccaagaaaagaaatggtttaca
gatgaaccagaaaatgcctacccaaggaacattcagatcaagcccatgagcactcacatg
gccaaccaagtcaaccaatacaaatccactagtagtctgatcccaccaatcagagaagtt
gaagatgaatgctga
DBGET
integrated database retrieval system
