Oreochromis niloticus (Nile tilapia): 100692493
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Entry
100692493 CDS
T06104
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04136
Autophagy - other
onl04140
Autophagy - animal
onl04145
Phagocytosis
onl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
100692493 (atg16l1)
04140 Autophagy - animal
100692493 (atg16l1)
04136 Autophagy - other
100692493 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100692493 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100692493 (atg16l1)
03029 Mitochondrial biogenesis [BR:
onl03029
]
100692493 (atg16l1)
Membrane trafficking [BR:
onl04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100692493 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
100692493 (atg16l1)
Mitochondrial biogenesis [BR:
onl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100692493 (atg16l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
ATG16
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
DSE1_N
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_NOL10_N
Tricorn_2nd
eIF2A
CFAP251_N
Beta-prop_ACSF4
WD40_RFWD3
Beta-prop_IFT140_1st
PUMA_CC
Beta-prop_SPT8
HALZ
Beta-prop_DCAF12
KASH_CCD
EXOC6_Sec15_N
CLIP1
NET2A
T3SS_needle_F
DUF1664
Motif
Other DBs
NCBI-GeneID:
100692493
NCBI-ProteinID:
XP_005462785
Ensembl:
ENSONIG00000017239
LinkDB
All DBs
Position
LG14:39691299..39703127
Genome browser
AA seq
605 aa
AA seq
DB search
MAERRGECLWKKHVAEQLKLRDREQRQAFEEIILQYNRLLEKADLQAVLSERYQADKYDV
QRGHESSAADSSRSDALQQEMAQMRIRHQEELTELHKKRGELAQSVIELNNQIQQKDREI
QNNEAKMLEYQQQISSLEGDCRELRSCLQDLERANQTLKDEYDALQITFSALEEKLRKTT
EDNQELVSRWMAEKAQEANRLNAENEKDSRRRQAKLQKELADAAKEPLPIEADDDIEVLT
EDAGKAGGETSPSRLLTRTPSKKISQQPPGGLLDSISLMFGRRRSANSFSTSPESSEAPS
GVCTEVRVPTTALHVFEAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVAGRCEPKGAL
TGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNAR
IVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRAESIV
RELELFGRVTSLDLNHDRTELLTCSRDDLVKIVDLRTNAVKQTLSAQGFKCGADWTRVTF
SPDGSYVAGGSADGALYIWNVLTGKVDRTLDRNHSSAINSVSWSPSGAYVASVEKGSRAI
LWSDM
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcgaggcgagtgtttgtggaagaaacacgtggcggagcaactgaagctt
agagaccgagagcagagacaggccttcgaggagatcatcctgcagtataaccgtctcctg
gagaaggcggacctgcaggccgtcctatcagagcgttaccaggccgacaaatatgacgtc
cagagaggccacgagtccagtgcggcagactcgagtcgcagcgacgccctgcagcaggag
atggctcagatgaggattcggcaccaggaggagctgacggagctgcacaagaaacgagga
gagctggctcagagcgtgatcgaactgaacaaccagatccaacagaaggaccgagagatc
cagaacaacgaggccaagatgcttgagtaccagcagcagatctccagcctggagggcgac
tgccgcgagctcaggagctgcttgcaggacctggagagggcgaatcagacgctgaaggac
gagtatgacgccctgcagatcaccttctccgccctggaggagaagctgaggaagaccacc
gaggacaaccaggagctggtgtcccgctggatggccgagaaggctcaggaggcgaaccgg
ctgaacgccgagaacgagaaggacagcagacggcggcaggccaaactgcagaaggagctc
gccgacgctgccaaggaaccgctgcccattgaggcggacgacgacatcgaagtgctgact
gaggacgccgggaaggcaggaggggagacgtcgccgagccggctgcttaccaggactccc
agtaagaagatctcccagcagcctccaggggggctgcttgactctatctccctcatgttt
ggcaggcgtcggagcgccaactctttcagcacttcaccggagagcagcgaggccccgtca
ggcgtctgcacggaggtccgcgtgcccaccacagcgctgcacgtctttgaagcccacgac
ggcgaggtgaacgctgtgaggttcagccctggctcccgtctcctagcaacaggagggatg
gaccgcagggtgaagctgtgggaggtggtggcaggtcgctgtgagcccaaaggagctctg
accggcagcaacgcgggaatcaccagcattgagttcgacagtgctggctcctacctgctc
gccgcctccaacgacttcgccagccggatttggaccgtggatgactacagactgaggcac
acgctgacgggtcacagcgggaaagtcctctctgctcgcttcctgttggacaacgctcgc
atcgtctctggaagctacgaccgcacgctcaaactgtgggaccttcgcagcaaagtctgt
atgaagacggtgttcgcgggctccagctgcaacgacatcgtgtgcaccgagcaatgcgtc
atgagcggacattttgacaaaaaggttcgcttctgggacatcagagcggagagcatcgtg
cgggagctggagctgttcggcagagtgacgtctctggatctgaaccacgatcgcaccgag
ctgctcacctgctccagagacgacctggtgaagatcgtcgacctgcgcaccaacgccgtg
aagcagacgctcagtgcgcagggtttcaagtgtggagctgattggaccagagtgaccttc
agtcctgacgggagctacgtggccggcggatcagctgacggcgctctgtacatctggaac
gtgctgacggggaaagtggaccgaactctagaccggaaccacagctcagccatcaactcg
gtgtcctggtcgccttcgggagcatacgtggcaagcgtggagaaaggcagtcgcgccatc
ttgtggtcagacatgtga
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integrated database retrieval system
