Oreochromis niloticus (Nile tilapia): 100692594
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Entry
100692594 CDS
T06104
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04020
Calcium signaling pathway
onl04144
Endocytosis
onl04510
Focal adhesion
onl04540
Gap junction
onl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100692594 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
onl01001
]
100692594 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
onl04090
]
100692594 (pdgfra)
Enzymes [BR:
onl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
100692594 (pdgfra)
Protein kinases [BR:
onl01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
100692594 (pdgfra)
CD molecules [BR:
onl04090
]
Proteins
100692594 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
C1-set
C2-set_2
Receptor_2B4
Ig_ADGRF3
Motif
Other DBs
NCBI-GeneID:
100692594
NCBI-ProteinID:
XP_005478935
Ensembl:
ENSONIG00000003001
UniProt:
A0A669DY06
LinkDB
All DBs
Position
LG23:37585307..37602086
Genome browser
AA seq
1467 aa
AA seq
DB search
MDWLKTFVLFGGSLVVLVSVTSGLLPPTILSDQEEFVLQPNSLFNISCTAKTHVVWEEPL
QKNALVYPGYYTSTLFIYNATVENTGYYTCKYEDPDEELEADEAEIYIFVPDPHAPFVPE
LPTDLVVSVDNYGFNIPCRVSHWDSYVILRKVPSGEALHALYNSKEGFFSNNLTPGQYQC
ETTLNGQIVRSSIYTVISNDPMEGKDFDDSDMEVIASEETLRAGQPFNITCIVPSGLDFQ
QQWLHPKKQAKDAVLMKETFPERVAYILSIPRAASQDSGTYECSVTDKSGEVRVKKVAVT
VFEENSFVAMDHSGILSTEFVHSFEETEFTIIIDAYPAPKVTWMKDGKDLQVNYYLFTTT
SHQGGNRYLSTLKFRHPLEKDNGNYTIIAQSGSHTAQFSFNLHMKAPTAGMIPSSSVPLL
LPKLDEMVVTLHTPFTLTCHGQENLGWETPIDVSEQTQEDPNGLFISTITVDSATASHTG
YYTCFYSRTFAEDTAEFSRIYIYVPDPDVPFLESLIPFGYHVLSGYDEMEIQCRVSDPNA
NVTLINSDTQQPVPSIYDSKRGALGIFTAGTYVCKAVINGHEFYSEEYIVHGSTDELDVE
LTAKKTALLVGDTITVTCVARGSEILEDHWKYPGKLANRGTKTVRENKRTQEIFYTLTIP
QASTKDSGIYSCSITDILSNSGQTKQLAIQVYASEFLSVKPEFREYESAALDEVREFKAV
VNSFPSVHVSWFKDGYPLSDVTAEISTSLQQTSEISYMSVLTLIRAKEEDSGNYTMRVEN
RNQSRDISLILEVKVPAVIVDLMDVHHGSAQGQSVVCITRGQPTPMVEWFVCKNIKHCAN
DSSSWVPIPANSTEITLDSHIDEDNNLESQVMFGHLESTMAVRCLARNEMAVVSREVKLV
SNGPHPELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESVSPDGHEYIYVDP
MQLPYDSRWEFPRDRLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSE
KQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRENFLSLN
PEKNKKELDIFGINPADESSRSYVILSFESKGDYMDMKQADSTQYVPMLEMSNASKYSDI
QRSNYDHPPSQKGSSEGEMEIMLSDDVNEGLTTTDLLSFTYQVAKGMEFLASKNCVHRDL
AARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVW
SYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMSKPEHAPHDVYEMMMKCWNSEPEK
RPSFLGLSETVASLLPSSYKRQYERVNHEFLKSDHPAVTRVCMENEDYIGIAYKNQGKLK
DRESGFDEQRLSSDSGYIIPLPDLDPISDEEYGKRNRHSSQTSEESAIETGSSSSTFAKR
EGETLEDITLLDEMCLDCSDLVEDSFL
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggattggctgaagacgtttgtcctctttgggggcagtttggtggttttggtttcagtt
acctctggactgcttccaccaaccatcttgtctgaccaggaggagtttgtcctacagcct
aattccctcttcaatataagctgcaccgctaaaacacacgtggtttgggaggaaccgctg
cagaaaaacgccctggtttatccggggtattacacttcaacactcttcatatacaacgca
acggtagaaaacacaggttattacacgtgcaaatatgaagacccggatgaagaactggaa
gctgatgaagcagaaatttatatttttgtcccagatccacatgctccatttgtccccgag
ttacccacagacctggttgtctccgtggacaattatggattcaacatcccatgtcgtgtg
tctcactgggactcctacgtcatcctgagaaaagtccccagtggagaggctttgcatgcc
ttatacaacagcaaagaagggttcttctcaaacaacctaactcccgggcagtaccagtgt
gaaaccactctgaatggccagatagtccgaagttctatttacactgtaatatctaatgac
cctatggaggggaaggattttgacgattctgacatggaggtaatagccagtgaagagacg
ttgcgagcagggcagcctttcaacatcacatgcatcgttccttctggcctggactttcaa
cagcagtggctccatcctaaaaaacaggctaaggatgcagttttgatgaaggaaactttt
cctgagcgggtcgcctacatcctcagtatcccacgagccgcctcacaggacagtggcacc
tatgagtgctctgttacagacaaaagcggtgaggtcagagtcaaaaaggtggctgtgacc
gtctttgaggagaattcctttgtggccatggaccacagtgggattttatccacagaattt
gtccacagttttgaggagacagagtttactatcattattgatgcatacccagcccccaaa
gtgacatggatgaaagatggcaaagacttacaagtgaactactacctctttactactact
agccaccagggaggaaatcggtatctgagcactttgaaattcaggcatcctctggaaaaa
gacaatggaaattataccataattgctcaaagtggctctcacactgctcagttctccttt
aacctgcacatgaaagctcccactgcagggatgatcccatcatcttcagtccctctgctg
ctgccaaagctggacgagatggtagttactctccacacccctttcaccttgacctgtcat
ggacaggaaaacctgggctgggagacgccaatcgatgtatctgagcaaacgcaggaggac
cccaacggcttgtttatcagcaccatcacagtggatagtgccacagcaagccacactggc
tactacacgtgcttttatagtagaactttcgctgaggatacagcagaatttagcagaatc
tacatttatgttccagaccccgatgtcccctttctggaatcactgataccttttggctac
cacgtcctgtctggatatgatgagatggagatccagtgtcgagtgtctgatccaaatgct
aacgtgactctgattaacagtgacacccagcagcctgtgcctagtatttatgacagcaag
aggggcgctttggggatattcactgctggaacctatgtctgcaaggccgtcataaatgga
cacgaattctacagcgaggaatacatcgtccatggctcgacagatgagctggatgttgag
ttgacagcgaaaaagactgctctgctggtgggcgacacaataactgtcacctgtgtggct
cggggatctgagattctggaagatcactggaagtatcctggcaaactggcaaatcgtggt
acaaaaacagtgcgagaaaataagagaactcaggagatcttttataccctgaccatccca
caagcttcaaccaaagacagcggcatctattcttgctccatcactgacatactgagtaac
agtggccagacgaaacaactagctattcaagtttatgcaagtgagttcttgtccgtcaag
ccagagttcagagaatacgaatctgcagcgctggatgaagtccgggagttcaaggctgtt
gtcaactccttcccaagtgttcatgtcagctggtttaaagatggctacccactcagcgat
gtgactgcagagatctccaccagcctccagcagaccagtgaaatcagctacatgagtgtt
ctcaccctgatccgagccaaggaggaggacagcgggaactacaccatgcgggtggagaac
agaaaccaaagtcgtgatatcagtttaatccttgaagtcaaagtgcctgcagtcattgtt
gatctgatggacgtccaccatggctcagctcaaggccagtctgtggtttgcattaccaga
gggcagccgacacccatggtggagtggtttgtctgcaagaatatcaaacattgcgctaat
gattcgtcttcgtgggtgcccatccctgccaactccactgagatcacattggactcacac
attgatgaagacaataacctggagagccaggtcatgtttggtcatctggaaagcacaatg
gcagtgcgctgcctggccaggaacgaaatggctgttgtcagcagggaggtcaaactggtg
tccaatggccctcaccctgagctgactgtagctgctgctgtgctggtgctcctggtcatt
gtcatcatctcactcattgtcttggttgttatctggaaacagaaaccacgatatgaaatc
cgctggagggtcatagaatctgtgagcccagacggtcatgagtacatctatgtggatccc
atgcagcttccctatgactcgagatgggagtttccccgtgacagacttgtgcttggtcgt
atcttgggctctggagcctttgggaaggtggtagagggcaccgcctatggactcagccgc
tcgcaacctgtcatgaaggtggcagtgaaaatgctgaaacccacagcacgctccagtgag
aaacaggccctgatgtctgaactcaagatcatgactcatcttggaccccatctcaacatt
gttaacctcctgggagcatgcaccaagtcaggccctatctacattatcactgagtactgc
ttctatggggacctggttaactatctgcacaagaacagggagaacttcctcagtctgaac
cccgagaagaacaagaaggagctggacatctttggaatcaaccctgcagatgaaagcagc
aggagttatgtgatcctgtcatttgaaagcaaaggggactacatggatatgaagcaggct
gacagcactcagtatgtgcccatgctggagatgagcaatgcctccaagtactcagatatc
cagcggtctaactatgaccatccaccctcgcagaaaggctcgagtgaaggtgaaatggaa
atcatgctgtcagacgacgtaaatgaaggcctcaccaccactgacctgctcagctttacc
taccaggtggccaaaggcatggagtttcttgcctccaaaaattgtgtacatcgagacctt
gcagccaggaatgtccttctctctcagggcaagatagtgaagatctgtgactttggactg
gctagagacatcatgcatgacaacaactatgtgtccaaagggagcacttttctcccggtg
aagtggatggcaccagagagtatttttgataacttgtacaccactctgagcgacgtctgg
tcttacggcatcctcctctgggagatattctccctgggtggcaccccgtacccagggatg
gtggtggactcgagtttctacaacaagatcaagagtggatacaggatgtcaaaaccagag
cacgcacctcatgatgtgtatgagatgatgatgaagtgctggaacagtgagccagagaag
aggccatctttcctgggtctgagtgaaacagtagcttcgttgttaccctccagctacaag
aggcaatacgaaagagtaaaccacgagttcctgaagagcgaccaccctgctgttactcgg
gtatgcatggaaaatgaggactacattgggatcgcctacaaaaaccaggggaagctgaag
gacagagaaagtggcttcgatgaacagcggttgagctctgacagtggctacatcattccc
cttcctgacctggaccctatatctgacgaagaatatggaaagaggaacagacacagctct
caaacatctgaagagagcgccattgagacaggctccagcagctccacctttgctaagcgc
gagggtgagactctggaggacatcacgctgctggatgagatgtgtctagactgtagtgac
ctggtggaagacagctttctgtga
DBGET
integrated database retrieval system
