Oreochromis niloticus (Nile tilapia): 100692601
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Entry
100692601 CDS
T06104
Name
(RefSeq) protein polybromo-1
KO
K11757
protein polybromo-1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100692601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100692601
03036 Chromosome and associated proteins [BR:
onl03036
]
100692601
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100692601
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
100692601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100692601
NCBI-ProteinID:
XP_013124698
Ensembl:
ENSONIG00000018967
LinkDB
All DBs
Position
LG5:22071489..22083482
Genome browser
AA seq
1638 aa
AA seq
DB search
MALKRRRATSPSSSVSGGDFDDSQASSLVPSFGRKRRRTSNIPTVDPIAVCHELYNTIRD
YKDDHGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVEQLTSDFQLL
FNNAKTYYKSDSPEYRAACKLWDLYLRTKNEFVQRGEYDEDDEDGYDAQDNPGGSTEDES
APTCLKELLEQLLDAVVSYTEPTGRLVSELFQKLPSKMQYPDYYAIIKEPIDLKIIAQKI
QLGHYRSVGAMAKDIDLLVKNAKTYNEPGSQVFKDANTIKKIFAQKKSEMEHGEPIKSSI
RIRNRRSAQGDRLSAITMALQYESDEEGILSGSVHYDEGESEAESMTSNMDMSNPIFQLY
EAVRGARNSQGQLISEPFLQLPSRKDYPDYYHQISQPICLHQIKNKMKNNEYESVEQIDS
DLTLMFENAKRYNVPHSSIYKRALKLQHIQQMKRKELLQRDDDDGDSMLSSATSDTSSTK
RKSHKKNTKKNRMKALFAAVTEAREAGTGRRLCDLFMVKPSKKDYPDYYKVILEPMDLRT
IEHNIRSDKYLTEDSMLEDMKLMFRNARHYNEEGSQVYNDADVLEKIMKDKRKELGPATD
DDDMMSPKLKIRKNSISLKKSKYLTPLQQKLHELYEAVKNYTDKRGRRLSTIFLRLPSRA
ELPDYYIAIKKPVDMEKIRSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDALL
LHRVLLETRRDQEGGEDAHVPDVPRLIQELIRSLFVSVLGHQDDEGRCYSDSLAEIPAVD
PANPEKPSLNFEIIRNNVDRGHYKRLDVFQDHMFEVLEKARRLNRTDSEIFEDAVELQQF
FIRIRDELCKNGEILMSPALSYTSKHLHSDVEKEKKEKLPKEFEEDKIKREEEKMEAEKR
EDPVGGSWQSGLQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWQDDTGEK
WLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKAPVSKILGKCVVMFVKEYFKLHPEGF
RAEDVYVCESRYSAKSKSFKKIKMWTMPLSSVRFVPREVPLPVVRVASIFAQKQEEKPPE
IADESKITNGIIDKEREDVPLDVTNGEPGCQYYEQLCYNNLWLKVGDCVYIASHGLVPHR
VGRIEKMWMRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCIIGKCVV
SSFKDYLSCRPTEVPEENVLLCESRYIESEKQMKKFKGLKRFSLSGKVVEDEIYYFRKLI
VPQKEPSPLLDRKIEELEAKFADMTDEELEDLGDDDGELGDQTLPQMQSSMSSDMDIMPY
TPPQSTPKSIKGLSKKEGSKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWR
NLDSSRKAEYEERAAKVAEQQERERAQHQTSPRAGTPVGALMGVVPPPTPMGMLNPSMTP
VSEGRMGAYRSAMMPLQGHVEGMVSMTGIPPHHMGLPVFPQHLLRVMPGFPGIPYFGING
VGGPGAGSVHGSQMGLVGPGQQAPPPYPGQAQIGQPALQQPSTPVFVSPPAKNQRVLHSE
AYLRYIEGLTAESPTVSKWDQALSVQKQDVRLTKEQESRLPSHWLKSKGAHKTMADALWR
LRDLMLRDTLNIRQMHNL
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaaaggagaagggcgacgtctccctctagcagtgtgagtggaggagatttt
gacgatagccaggcttcatcgttagtgccttcatttgggagaaagaggagaaggacctca
aacattcctactgtggatcctatagctgtatgccacgaactatacaacacaatcagagat
tacaaggatgaccatgggaggatgttgtgtgagctcttcatcagagccccaaaaagaagg
aatcagccagactattaccacgtggtgtctcagcctattgacatgatgaagatccagcag
aaattaaagatggaggaatacgacgatgttgaacaactaactagtgactttcaactttta
ttcaacaatgcaaagacttattataagtcggacagtccagaatacagagcagcctgtaaa
ctgtgggacctttacctgcgcaccaagaatgagtttgttcagcgaggggaatacgatgaa
gatgatgaagatggatatgatgcacaagacaaccctggaggatctactgaagacgagagc
gcacctacctgtttgaaagaactccttgagcagctccttgatgctgtggtgtcgtacact
gagcctactggtcgccttgtcagcgagctgttccagaagcttccctccaaaatgcaatac
ccagattattatgccatcattaaggaaccaatagatctgaaaatcatcgctcaaaagatt
cagttgggccattataggagtgtgggtgccatggctaaggacatagacttactggtcaag
aatgccaaaacctacaatgagcctggatcacaggtgtttaaggatgcaaacaccattaaa
aagatttttgcgcaaaagaagtcagagatggaacatggagagccaatcaagtccagcatt
cgtatcaggaatagaagatctgcacagggagaccgcctctcagctatcaccatggctctt
cagtatgaaagtgatgaggaaggcatactctccgggtctgtccactatgatgagggagaa
tcagaggcagagagtatgacctctaacatggacatgagtaatcccatcttccagctgtac
gaagctgtgcgcggtgccaggaacagccagggccagctgatttctgagcctttcctgcag
ctgccgtccaggaaagactacccagactactaccaccagattagtcagcccatctgcctc
catcagatcaagaacaagatgaagaacaatgagtatgagagtgttgagcaaatcgactca
gacctgacgttgatgtttgagaatgccaagcgctacaatgttcctcactcttccatctac
aagcgcgctctaaaacttcagcacattcagcagatgaagagaaaggagcttttacagaga
gatgatgatgatggagacagcatgctctcctctgccacctctgacaccagtagcacaaaa
agaaaaagtcacaagaagaatacgaagaaaaacaggatgaaagctctctttgctgctgtg
actgaggcgcgagaagccggcactggtcgcagattgtgtgacctcttcatggtcaagcct
tcaaagaaggactatcccgattactacaaagtcatcctggaaccaatggatctgaggacc
atagagcacaatatccgctcagacaagtaccttaccgaagactcgatgctggaagatatg
aagctgatgtttcgcaatgcacgacactacaatgaagaaggctctcaggtctacaacgat
gcagacgtcctggagaagatcatgaaagacaagcgcaaagagcttggcccagcaactgat
gatgatgacatgatgtccccaaagttgaaaataagaaagaacagcattagtctaaagaag
tccaagtatttaacacctctacagcagaaactgcatgagctttacgaagctgtcaagaac
tacactgataagcggggccgtcgtctcagcacgatcttcctgcggctgccatctcgtgct
gagctgcctgactattacatcgccatcaagaaacctgtggacatggagaagatcaggagc
cacatgttggctaacaagtaccaggatgtagacgctctggttgaggacttggtgctcatg
ttcaacaacgcctgcacttacaatgagcccgagtctctgatttaccgcgatgctctgttg
ctgcacagggtgctgttagagacgaggcgtgaccaggagggaggagaggatgcccatgta
cccgatgtgcctcgcctcatccaggaactcattcgcagcctctttgtttctgtgctcggc
caccaagatgatgagggacgttgttacagcgattcactcgctgagatcccagctgttgat
cctgctaacccagagaagccgtcgctcaattttgagattatcagaaataatgtggatcga
ggccattacaagagattggatgtatttcaggaccacatgtttgaagtgttggagaaggcc
agaagactgaatcggacagactctgagatctttgaagatgctgtggagctgcagcagttc
ttcatacgtatcagagatgaactgtgtaagaacggagagatcttgatgtccccagcgctc
agctatacctctaaacatctgcatagtgatgtcgaaaaggagaagaaagagaagcttcct
aaggagtttgaagaggacaaaattaagagagaagaggagaaaatggaagcagagaagagg
gaggatcctgttggaggatcatggcagtcgggcctacagcgcacatacagtcaggactgc
agcttcaaggacagtatgtaccatgtgggagactacgtgtacgtggagcctgcggagcct
aacctccagccccatataatctacattgagcgtctttggcaagacgacaccggggaaaag
tggctatatggctgctggttctataggccaaatgaaacatttcatctggctacaaggaaa
ttcctggagaaggaagtttttaagagtgactattataacaaagctcctgtcagcaagatt
ctgggaaaatgtgtggtcatgtttgtgaaggaatacttcaagcttcatcctgaaggcttc
agagcggaggatgtttatgtctgtgagtcccgttactctgccaagtccaagtccttcaag
aagatcaagatgtggacgatgcccctgagctccgttcggtttgttcccagagaggtaccc
cttcctgtagtccgtgtggcgtccatttttgcccagaaacaggaggagaagccaccagag
attgcagatgaaagcaagattacaaatggtataatagacaaggaaagggaagatgtccca
ttggatgtgaccaatggggagccagggtgtcagtactacgagcaactctgctacaacaac
ctgtggcttaaagtaggagactgcgtttacattgcttctcatggacttgtgccccaccga
gttggcaggattgaaaaaatgtggatgcgcgatggagcgggttacttttttggtcccatc
tttattcatcctgaagaaacagagcatgaacccacaaagatgttctataagaaggaagtg
tttctcagcaacctggaggagacttgtcccatgacctgcatcataggaaagtgtgtcgtg
tcatctttcaaagactatttgtcatgccggccgactgaagtgcctgaagagaacgttctg
ctttgtgagagccgctacattgagagtgagaagcagatgaagaaattcaaaggtctgaag
cgcttctcactctctgggaaggtggtggaggatgaaatctactattttaggaagcttata
gtaccccagaaagagccatcccctctgttagataggaaaattgaggaactggaagccaag
tttgctgacatgactgatgaagagctagaggatcttggggatgatgatggcgagctaggg
gaccagactcttccacagatgcagtcttccatgtctagtgacatggatatcatgccttac
actcccccgcagtcaactccaaagtccataaaagggctttcaaagaaggaaggctcaaag
aggaagatcaacatgagtgggtacatcctgttcagcagtgagatgcgagcggtgatcaaa
gctcagcacccagacttttcctttggagagttgagccgtcttgttggcacagagtggagg
aacctggacagttccaggaaagcagagtatgaagagcgagcagctaaagtggccgagcaa
caggagcgtgagagggcccagcatcagacgtcccctagagcaggtaccccagtaggggca
ctgatgggggtggtgcctcccccaacccccatggggatgctaaatcccagcatgacgcct
gtgtcagaaggtaggatgggtgcatataggtcagctatgatgcccctgcaaggacatgtt
gaaggcatggttagtatgactggcataccaccacatcacatggggttgcctgtctttccc
caacatctcctgcgcgttatgcctgggttccctggaataccatactttggtatcaatgga
gtaggtggacctggagcaggaagtgttcatggatctcagatgggtttggttggcccagga
cagcaggctccaccaccgtaccctggtcaggctcagataggacaacctgcactgcagcag
ccatcgaccccggtgtttgtgtccccacctgccaaaaatcagcgagtgctccactctgag
gcttacctgagatacatcgagggccttacagcagaatccccaactgttagcaagtgggac
caagctctctcagttcaaaagcaagatgtgcgtttgacaaaagagcaagagagcagactg
ccgtcccactggctgaagagtaagggcgcccacaagacaatggcagatgcactttggcga
ctacgggacctgatgctgcgggataccctgaacatccgtcagatgcacaacctgtag
DBGET
integrated database retrieval system