Oreochromis niloticus (Nile tilapia): 100692802 Help Entry 100692802         CDS       T06104                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism onl  Oreochromis niloticus (Nile tilapia) Pathway onl03440   Homologous recombination onl03450   Non-homologous end-joining onl04218   Cellular senescence Brite KEGG Orthology (KO) [BR:onl00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     100692802 (rad50)    03450 Non-homologous end-joining     100692802 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     100692802 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:onl03032]     100692802 (rad50)    03400 DNA repair and recombination proteins [BR:onl03400]     100692802 (rad50) DNA replication proteins [BR:onl03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     100692802 (rad50) DNA repair and recombination proteins [BR:onl03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      100692802 (rad50)     BRCA1-C complex      100692802 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      100692802 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 AAA_15 SbcC_Walker_B SMC_N ABC_tran zf-met DUF269 AAA_29 AAA_22 AAA_13 AAA_16 Motif Other DBs NCBI-GeneID:  100692802 NCBI-ProteinID:  XP_025766630 Ensembl:  ENSONIG00000008512 LinkDB All DBs Position LG10:19673878..19704400 Genome browser AA seq 1312 aa AA seqDB search MSKIDKMSILGVRSFGIEDKDKQVISFFTPLTVLVGPNGAGKTTIIECLKYSTSGELPPG SKGGAFVHDPKDAHETDVRAQIRLLFSDVNGEKVTIQRSMSCTQKAKSYTFKSLEQVITR WKDGEKVSLSSKCGELDREMISSLGVSKPVLNHVIFCHQEESNWPLSEGKALKDKFDSIF AATKYIKALETMRQLRLKQSQIVKECQVELRYLKQNKEKAQQIRETVDTKEAQLMASKDS VQQIENQIEPLENRLMDIDLKLGKVMKLDNEIKALDSRKKQMEEDNKELEETMEQVFQGS DEELQEIYQNHQRTVREKERRLTECQKELERAGRECQRLNRIKAELLVEQGRLQLEADRH TQNIRNRDTQVRSLSTYLEMEGYDRPPFTALQLESFHRHVTQRLEQEKGTLSQVMVNLQE KEQQKQQSIDEMRDKKTGLERTVELKRDMQGKKQQELRSVRAELQRLEGSSTRLQELENE LAKVERELQSAIQNSNVEQLKAEVSELQREKAELDRKQRKLDQEMETLNTHMTSRTQMDM LKKDKGEKEEQVRKIKSRHSEDLVPLLGQFPNKRVLEDWIYSKSKEINSTRNRLAKLNKD LASSEQNKSHISAELRKKEQQLTSDEEKFFNVCGSQDLDQDLSKLQEDLEKMSKQRAMLA GATAVYTQFISQLTEDREPCCPVCQRTFPSESDLQEVINDMQSKLRLVPDKLKNTEQDLK RKERKKDEMMALKPVRQSIVQLQEKELPELKNRLQTVNREIERLKGDVEEQETLLATLMS EEETAKACLPDISLLDRYQMDLKEVERKIAQHAAKLQGVDLTRTTQQVSQEKQETQHKLD TTSSKMELKRKLIQDQQEQIQTLRSAVNETRAEKLQLSSDMQKQQQLEEQCAEFTTEIQS LTRDIREAKEQLSPLSAALEKLQQEKQELLERKRQKQEEGQEKISSIKERLKAITTLERD ITKYVDEGKDEYKEQKESELHETNTQLHEAEKHKEKINKEIGNIRQDIDTQKVQERWLQD NLTLRKRVEELKEVVGKREALMKDMGNMQVMQLRQERREAERKLEDLKRNRSIALGRQKG FEDEILHYRKELREDQYDKADERYRNKMITMRTTELVIKDLDLYYKALDQTIMKFHSMKM DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSAGVRRRVYNYRVVMVKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR NFQLLIITHDEDFVELLGRSSYIEHFYRIRKNQDQNSEITKCSINSLSSYLH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcaaagatcgacaagatgagcatcctgggggtgaggagctttgggattgaggataaa gacaaacaagtcatctctttcttcactcctctgactgttctggtcggacccaatggagcg gggaaaacgactattattgaatgcctaaagtattcaacatctggagaacttccccctgga tctaaaggaggtgcatttgttcatgatccaaaggatgcccatgagacggatgtgcgtgct caaattcgcctcttattctcagatgtcaatggagagaaagtgaccatccaacgctctatg tcatgcactcagaaggcaaaaagctacacctttaaaagcctagagcaggtcattaccaga tggaaagatggtgagaaagtcagcttgtcttctaaatgtggtgagctggaccgggagatg atttcctcattgggtgtgtcgaagcctgttctaaatcatgtcatcttctgtcaccaagaa gagtctaactggccccttagtgagggaaaagcactcaaagacaaatttgactccattttt gctgcaaccaagtatatcaaagctctggagacaatgcgtcagctgcgtctcaaacagagt cagatagtcaaagagtgtcaggtggagctgcgctacctgaagcagaacaaggagaaggcc cagcaaattcgagaaactgtggacaccaaagaagcccaactgatggcctcaaaagacagc gtccagcagatagagaaccagattgagccacttgagaatcgactgatggatattgacctt aaactcgggaaagtgatgaagctagataatgagatcaaggctttagacagcaggaagaaa cagatggaggaagacaataaggagctggaggaaacaatggaacaggtgtttcagggttca gatgaggagctgcaggagatttaccagaaccaccagaggacagtgagggagaaggagcga aggctgaccgagtgccagaaggagctggagagagctggcagagagtgtcagagacttaac agaatcaaagctgaactcctggttgaacaaggtcgtctacagttggaagctgaccgccat acacaaaacatccggaaccgtgacactcaggttcgctctctgtcaacctatctggagatg gagggctatgaccgaccacccttcactgctcttcagcttgagagctttcatcgtcatgta acgcagagactggagcaggaaaaagggacacttagccaagttatggtcaatctgcaggaa aaggagcaacagaagcagcagtctattgatgaaatgagggataagaaaactggcctggaa agaacagtggagctgaagagggacatgcagggaaagaagcagcaagaactgaggagtgtc agagcagagctgcagaggctggagggttcgtctactcgactgcaggaacttgaaaatgaa ttggctaaagtggagcgtgagctgcagagtgcaatccagaactccaacgtggaacagttg aaggctgaggtttcggaactccagagagaaaaagctgaacttgaccgcaaacagagaaag ctagatcaagagatggagacgctcaacacacacatgacttcacgcacgcagatggacatg ctgaaaaaggataagggcgaaaaggaggagcaggtacgcaagatcaagtcccgtcacagt gaggatctggtgcccttactgggccaatttcccaacaagagagtgctggaggactggatc tattccaagtccaaggaaattaacagcaccaggaacagacttgcaaaactcaataaggac ttggcttcaagtgagcagaacaaaagccacatttctgctgagctgcgtaagaaggagcag cagttaaccagtgacgaagagaagttcttcaatgtgtgtggtagtcaagatctagaccag gacctgagcaaactgcaagaagatctggagaagatgtcaaaacaaagagccatgctagct ggagccacagcagtgtacactcaattcatcagtcagctgacagaggacagggagccctgc tgcccagtgtgccagcggacgttcccctctgagtctgatctgcaggaggttatcaacgac atgcagtcgaagttacgcctggtgccggacaaactgaaaaatacagagcaggacctgaag aggaaggagaggaagaaagatgagatgatggctctcaaacctgtgagacagtccattgta cagcttcaggaaaaggagctaccggagttgaaaaaccgtctacagactgtgaacagagaa attgagaggttgaaaggtgatgtggaggagcaggagactctacttgccacgctgatgtct gaggaagaaactgccaaggcctgcttgccggacatttctctcctggacagatatcagatg gaccttaaggaggtggagaggaaaatcgctcagcatgcagcaaaactccaaggagtagac ctgaccagaaccacacaacaagtcagtcaggagaaacaagaaactcagcacaagttagac accacttccagcaagatggagctgaaacgtaagctgatccaggaccagcaggaacagata cagacgcttagaagtgcagtgaatgagacgagagcagaaaagctccagctgagcagtgac atgcagaaacagcagcagctggaggagcagtgtgccgagttcaccactgagatccaatcc ttgaccagagacatcagggaggcaaaagaacagctgtcccctctgtctgccgctctggag aagctacagcaggagaaacaagagttgctggagcgcaagaggcagaagcaggaagaaggg caggagaagatcagctccattaaagagagattaaaggcgatcaccactttggaaagagac atcactaaatatgtcgatgagggcaaagatgaatacaaagagcaaaaagagtctgagctc catgaaactaacactcagctccatgaagctgagaagcataaggagaaaattaataaggaa ataggaaacatccgtcaggacatagacactcaaaaggtccaggagcgctggttacaggac aacctgacattgagaaaacgcgttgaggagttgaaagaagttgtgggtaaacgtgaggct cttatgaaggacatgggcaacatgcaagtcatgcagctacgccaagaacggcgtgaagca gagcgcaagctggaggatttgaaaagaaaccgcagtattgcattgggccgacagaaaggc tttgaggacgagatactgcattataggaaagagctgcgagaggatcagtatgacaaagct gatgagcgctacagaaacaagatgattacaatgaggaccacagaactggtcattaaggac ctggatctctactacaaggctcttgatcaaaccatcatgaaattccacagtatgaagatg gatgaaatcaataagatcatacgagacctatggcgcagcacctacaggggtcaagatatt gagtatgtggagatcagatctgatgtggatgagaattcatctgctggagtgaggcggagg gtttacaactacagagtagttatggtgaaaggagacacagctctggatatgagaggacgc tgcagtgctggccagaaggtactggcatcgctgataatccgtctagctctggcagagaca ttctgtctgaactgtgggatcctagctctggatgagcccacaaccaacctggaccgagag aacatcgagtcactggcacatgcccttgtagaaatcattaagagtcgctctcgccaacgc aacttccagctgctgatcatcactcacgacgaggactttgtggagctgctcgggcgatcc agctacattgaacatttctatcgtatccgtaagaaccaggaccagaactctgaaatcacc aagtgcagcatcaattccctctcatcctatcttcactga

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