Oreochromis niloticus (Nile tilapia): 100692875
Help
Entry
100692875 CDS
T06104
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
onl03037
]
100692875 (ift52)
Cilium and associated proteins [BR:
onl03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
100692875 (ift52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
DUF4159
Motif
Other DBs
NCBI-GeneID:
100692875
NCBI-ProteinID:
XP_005450173
Ensembl:
ENSONIG00000020248
UniProt:
A0A669D024
LinkDB
All DBs
Position
LG5:complement(33721470..33726201)
Genome browser
AA seq
434 aa
AA seq
DB search
MEKEQYNSVVFNASKRELFTTNSGYKSMQKRLKAQWKIQSIKEELSLDKLKSVKLWITAG
PRERFTASEMEALKVYLDGGGNILVMLGEGGEMKYDTNINFLLEDFGVMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGIIEDENVGNNAQALTFVYPYGATLTVVKPA
VAVLSTGSVCFPLNRPVLAFYQGKNSGKLAVLGSCHMFSDQYIDKEENNKIMDVVLQWLM
TDNIQLNQIDAEDPEITDYTMLPDTGCLSEQLRVCLQEGDENPRDFTSLFDMSLFNLSTD
TLPQVISAYKQLNVKAEPLQLIAPQFETPLPQLQPAVFPPALNDLPPPMLDLFDLDETFS
SEKVRLAQLTNKCTDDDLEFYVRKCGEILGVTPKLDKEQRDAKHILEHIFFQVVEFKKLN
QEHDMDPEARFTPL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaacagtacaacagcgtggtcttcaatgcttcaaaaagagagctttttact
acgaacagtggctacaaatccatgcagaagagactaaaagctcagtggaaaatccaaagc
ataaaagaagagctgtcattggataagctgaagagtgtcaagttgtggataactgcaggt
ccaagggagaggttcacagcgtcagagatggaggcgctgaaagtctacctggatggagga
gggaatatcttggtcatgctcggtgaaggaggagaaatgaagtatgacacaaacatcaat
ttcctcctggaggacttcggagtaatggtcaacaatgatgctgtggtgaggaatgtgtac
tacaaatacttccatcctaaggaggcgcttgtgtcgaatggtgtactgaacagggagatc
agtcgtgctgctggaaaagtggtcacgggaatcattgaagatgaaaatgttggaaacaat
gcacaggcgctcacatttgtgtacccgtacggtgccacactgaccgtggtgaagccggcc
gtggctgttctttcaacgggctccgtctgctttcccctcaacaggcctgtcctggctttc
tatcagggcaagaattctggcaaactggctgtcttgggttcctgccacatgttcagtgat
caatacatagacaaagaggagaacaataaaatcatggacgttgtgcttcagtggctcatg
accgataacattcagctgaatcagattgatgccgaagacccagagatcacagattacaca
atgctgccagacactggctgtttgtctgaacagctcagagtgtgcttacaagaaggagac
gaaaacccacgggacttcacctctctctttgatatgtctttgttcaatctgtcgactgac
accttaccccaagtcatcagtgcttacaagcagcttaatgtgaaagctgagccactgcag
ctgattgcaccgcagtttgaaactcctctgcctcagcttcagcctgctgtctttccacct
gccttaaatgatttgccaccacccatgctggacctgttcgatctagacgaaacattctcg
tcggagaaagtgcgactggcacagctcaccaataagtgtacagacgatgaccttgaattc
tacgtccggaaatgtggtgaaattctcggagtgactcctaagttggataaagagcagagg
gatgccaagcacatcttggaacacattttcttccaggttgtagagttcaagaaactaaat
caggaacacgatatggatcctgaggcccggttcactccgctgtga
DBGET
integrated database retrieval system
