Oreochromis niloticus (Nile tilapia): 100692877
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Entry
100692877 CDS
T06104
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X3
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04020
Calcium signaling pathway
onl04080
Neuroactive ligand-receptor interaction
onl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100692877
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100692877
04082 Neuroactive ligand signaling
100692877
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100692877
Ion channels [BR:
onl04040
]
Ligand-gated channels
Glutamate (ionotropic)
100692877
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
RPN7_PSMD6_C
Motif
Other DBs
NCBI-GeneID:
100692877
NCBI-ProteinID:
XP_013125568
Ensembl:
ENSONIG00000000888
LinkDB
All DBs
Position
LG19:complement(19543065..19620889)
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AA seq
1146 aa
AA seq
DB search
MSARVPPSTLGSLLLAVLQGGDGGDRDRGSRGDSWGGAAVICPGWDEGGDGLLTHLQKYS
GSTWHLWDIINLTRITGSRDRRGGSSEERREDQMEEEALKIISTRFLRSPSPVSSVLLLG
SDPECLSSVLRAAQRLAPSLPALQWIMGYPLSPDSLHTLGGPLGLLAYGEVGRKPISFYI
RDALQLIGRAVTAATMVRPDLALIQNMVNCYDKPNRHEQPSSGQYLARFLSNTSFTGATG
LIQVDAGVSRILSSQLFHVWSLKRGALGQPAWVTVGQWTRGRLELEGGILGLVGGFMTSQ
GQGLGAGVRGGDGQGDGNFGGRWRPGLSVEGHRLRVVTLVEHPFVFTREVDEDGLCPAGQ
LCLDPKTNQSSIIHGLFNQLHNSNTTTVDWDGTELPEDLRKCCYGYCIDLLEKLAEDMGF
TFDLYIVGDGKYGALSGTGRWTGLVGDLLSGTADMAVTSFSINSARSRVIDFTSPFYSTS
LGILVRSRDTAAPIGAFMWPLHWSMWVGIFVTLHLTALFLTLYEWNSPFGMTPHGRNRLR
VFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEK
TFEQVSGIHDDKLHHPSLGFRFGTVRESSAEDYMKKSFPEMHDYMRRFNQPTTPEGVHML
KTDPPALDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQGSPLTRNVSEFVS
RYKSDGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCMGVGGALLTLAGE
HTFYHLVIPRLRRSHTLQYWLHTSQKIHRALHTTYEDVGKEMAGLDQNPSSCISENCTLH
RKQHQPPPPSPPTSAGDTGNSSPSHEPKEKRVHFDLETLHSYRLRTHTASVRGRPGMVGR
PGLGLGGLGLANLGSFTSPPQISLHANGGPVSTLASTGLVLSPMGTRGAQTSLWEGELQE
LQAKIEIFRTQLREALARRAEIQSSLERERSGLVRRDTSLDRDRDRQRIQTINTDRSSST
QPRLPERDRTSQLQTLNNQQTGRANQSGGPGTVEHGRSSQLNTVNSLDRGRANQVRPVNT
LTGERTVQSRTSTSLERSRANQQGAGNTTIQTRNTSSLDRQKANLSRALNTLERTKANQS
TVSSET
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccgtgtgcctccatcaaccctgggaagtttgctccttgcagttttgcagggg
ggagatggtggggacagggatagaggaagccggggggacagctggggaggagcagctgtg
atctgcccaggctgggacgaaggcggtgatggcttactgacccaccttcagaagtacagt
ggttcaacctggcatttgtgggacataatcaacctgactcgcatcacagggagtagagat
agaagaggggggagcagtgaggagagaagggaggatcagatggaagaagaggctttgaag
atcatctccacccgtttcctgcgctccccctcacctgtttcctctgttctcctcctggga
tccgaccccgagtgtctatcctccgtccttcgggctgctcagcgcctcgcaccatcacta
ccagcactgcagtggatcatgggatatcccttgtctccagattcgctgcacactttagga
ggtcctcttggactgttagcctatggggaggtcggccgcaagccaataagcttctatata
cgggatgctttgcagctgattggccgggcggtcactgcagcaaccatggtgaggccagat
ttggcactcattcagaacatggtaaattgctatgacaaaccaaaccgacatgaacagccc
tcttctggacaatatctggccaggtttctctccaacacttccttcaccggggccacaggc
ctgatccaggtcgatgctggtgtttctcggatcctgtcctcccaactgtttcatgtatgg
agtctgaagagaggtgctctggggcagcctgcttgggttactgtaggccagtggacccga
ggtcgcctggagttggaagggggcattctgggactggtgggagggttcatgaccagccag
ggacaaggtcttggagccggggtgaggggaggggatggccagggtgacggtaactttgga
ggtcgctggaggccgggactttcggttgaaggacaccgcctcagggttgtgaccctggtg
gaacacccatttgtcttcacacgggaggtggatgaggatggattgtgtccagctggacag
ctttgtctggaccccaaaactaaccagtctagtataatacatggcctttttaaccagctt
cacaactcaaatactacaacagtagactgggatggcacagaactaccagaggacctgaga
aagtgctgctatgggtactgcattgacttgttggaaaagctggcagaagacatgggcttc
acattcgacctatatattgtgggagatggaaagtatggggcgctcagtgggacaggacgc
tggacgggactagtaggagatctgctgagcggaactgccgacatggccgtcacctctttc
tctattaactctgccaggagcagagtcatagatttcacctcacccttctactccaccagc
ctgggcattctggtccgtagccgggacactgcagctcccattggagccttcatgtggccc
ctccactggtccatgtgggtgggtatttttgtcacgctgcatctcacagcgctcttcctc
accttgtatgagtggaacagcccctttggcatgacaccccatggccggaacagactacgt
gtattctcctactcctctgctctgaatctctgctacgccatactgtttggacgcactgtc
gccaccaagacccctaaatgctggacaggacgcttcttgatgaacctttgggctatattc
tgtttactggtgctgtccagctatacggccaaccttgctgcagtaatggtgggggagaag
acgttcgagcaggtttcaggaattcatgatgacaagctgcaccatccgtcactgggcttc
cgttttggtaccgtgagggagagcagtgctgaggattacatgaagaagagtttcccggag
atgcacgactacatgaggcgcttcaaccaacccaccactccagaaggtgtacacatgtta
aagacagatcctcctgccctggatgcattcatcatggataaagccctgttggactatgag
gtctctatcgatgcagactgcaaactacttactgtgggaaagccatttgctattgaaggt
tatggtattggccttccccagggttcacctctaacccgtaatgtgtcagagttcgtcagt
cgctacaagtctgacggtttcatggacatgctacacgacaaatggtataaggttgtaccc
tgcggaaagagagtctttgcagtcactgagactctacagatgggaatccagcatttctca
ggcctgttcgtgttgctatgcatgggggtaggtggagccttgctgaccttggcaggtgaa
cacactttctatcacctggtcatccctcgcctccggcgtagccacacacttcagtactgg
ctgcacaccagccagaaaattcacagagccctgcacaccacatatgaggatgttggaaag
gaaatggccggccttgatcaaaacccctcctcttgtatctcagagaactgcaccctacac
aggaaacagcatcagcctcctccaccatcccctcccacgtcagctggggacacgggcaac
tcctcaccatcccatgaacccaaggagaaacgcgtgcactttgacctggaaacgcttcac
agctaccgcctgcgcacacacaccgcctcagtgcgcggcaggcctgggatggttggccgt
cctggactcggcctcggagggttggggcttgccaacctggggagttttacttctcctcca
cagattagcctccatgccaacgggggccctgtctcgactctggcttccacaggcttggtg
ctgtctcccatgggaaccagaggtgctcagaccagcttatgggaaggggagctccaggag
ctgcaggcaaagattgagatattccgcacccagctgagagaggctctggctaggagagct
gagatccagagcagtctggagagagagaggagtggactggtacgcagggatactagtctt
gatagggacagggacagacagaggatacaaactattaatacagacagaagtagctccact
cagcccagactccctgagagagacaggaccagccagctgcaaaccctgaataatcagcag
actgggcgggctaaccagtcaggtgggcctgggactgtggagcatgggagaagcagccag
ttaaacacagttaacagtttggacagaggcagagccaaccaagtgcgccctgttaatact
ttgacaggagaaaggactgtccagtcgcgcacttccactagtttggagcgaagtcgagcc
aaccaacaaggtgctggaaatacaactatccaaacacggaatacttctagcctggacaga
cagaaggctaacctatcacgcgcactgaacactttggagaggacaaaagctaaccagtcg
actgtaagcagtgagacttga
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