Oreochromis niloticus (Nile tilapia): 100692937
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Entry
100692937 CDS
T06104
Symbol
lrrc49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
onl03037
]
100692937 (lrrc49)
04812 Cytoskeleton proteins [BR:
onl04812
]
100692937 (lrrc49)
Cilium and associated proteins [BR:
onl03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
100692937 (lrrc49)
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
100692937 (lrrc49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
100692937
NCBI-ProteinID:
XP_019216186
Ensembl:
ENSONIG00000002895
LinkDB
All DBs
Position
LG1:complement(32571319..32603883)
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AA seq
822 aa
AA seq
DB search
MEQDLAEGKIIRSHKQNTGEKWMFLTPMINSCKLHLTTEKSLVPARAQAMSDSQDHVKET
FNHSDLENSLHGGIQKRAVQELFASDKCTYSQKVLLSGAAVSDAAYKARHKARRQTQCTG
ETFGQNALKNAKPAGDFPGCNYSAVPGFLSTQLPFTSSFQRIDLERQSLEECPQLDFVKE
LQFLNLQHNLITKIQHLSHLQQLVLLNLHDNHISDMTGIEVLRSLRILILGKNRIHEICC
LDSLSKLNMLDLHDNQICRIENVSHLSELRVLNLAGNNISKVENLQGLDSLTELNLQQNC
ISVVTRQHAVCVCVCVCACAGWMGMLHAGAESCKTEVDHLPLLQRLFLSCNNITSFDQLA
CLGESCSLSELTLDGNPVALETWYKQAVLRCVLHLRQLDMKRITDEDRRMAGVQARKEEE
KKKESHKQTIHKEKRRLAIRNAAQQWEGVRACLELPSTNGAKEEVSPENSPAHSPAQTNG
LTQEPSPDEPRRVSPGSGPERPSGGTEIRLQTNSRPNSPRDPKLVEAGSGSVQSLSLSDS
HLAELDGDTLRLFGLGALEALERGWGVQTAGAVTVITFRYISFDAIVPTLPRIRVKFPNL
SHMIFLETNISRLPQLAALAQVRRLDQLTIHPDGNPVVSLTLWRSFVIYRLHHFNLQRIN
GLEVTMNDVIAAERVFGTLGHIAATETPRCRLLLLLEESRKRQLQFLLEGRGRRAGLSPE
ELRDNGKLLGEGLSRALFNYPSRDCSAESPEEGSVESSERATMVEQYLQELVQSASDTNL
KGEALHKLWPSMFAEMVRDCVLEMRDRAAFRQASLAKLSETK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggatttagccgagggtaaaatcatccgctctcataaacagaacacaggcgaa
aaatggatgtttctcacccctatgatcaacagctgcaagttgcacctcacgactgagaaa
tctctcgtgccagcgagagcacaagcgatgagtgactctcaagatcatgtaaaagaaaca
tttaaccactctgacctagaaaacagtttacatggaggcatccagaaaagagctgtccag
gaactatttgcaagtgacaaatgtacatatagtcaaaaagtgctgctcagtggagctgct
gtttcagatgctgcatacaaagcaagacacaaagcaaggagacaaacccagtgtacgggg
gaaacttttggccagaatgccttaaaaaatgcaaaacccgcaggtgattttcctggatgt
aattacagtgctgtgcctggttttctctccactcaattgcctttcacatccagttttcaa
cgaattgacttggaaagacaatctctggaggaatgcccacagttggactttgtaaaagaa
ctgcagtttctcaaccttcagcacaatctaattacaaagatccaacatttgtcacatttg
cagcagctggttttactgaatttgcatgacaatcacatcagtgacatgaccggcattgaa
gttctgaggtctctcaggatcctcatactggggaagaacagaattcatgaaatctgctgc
ctggacagcttgtctaaactgaatatgttggatttgcatgacaatcagatctgcaggata
gaaaatgtatctcatctgagtgaattaagagtgttgaacctagcaggaaacaacatctcc
aaagtggaaaacttgcagggtcttgactctttgactgaactgaacctacagcagaactgc
atctctgttgtgacaaggcagcatgctgtatgtgtgtgtgtatgtgtgtgtgcatgcgca
gggtggatggggatgctgcatgctggagctgagagctgcaagactgaggtggaccatctg
cccttgttgcagcgcctctttctcagctgcaacaacatcaccagttttgaccagctagcc
tgccttggagagtcgtgctccctttctgagctcacgctggatgggaatcctgtagccctg
gagacatggtacaagcaggccgtcctgcgctgtgtgcttcatctcagacagctggacatg
aagcgcatcacagacgaggatcggcgcatggcaggtgtacaggctcgaaaagaggaggaa
aagaagaaggagagtcacaagcagaccattcataaggagaagcggcgtctagcaatccgt
aatgctgcacagcagtgggagggtgtcagggcctgcctggagctcccatccacaaatggc
gctaaagaagaagtcagtccagagaacagccctgctcacagccccgcccagaccaatggc
cttacacaggaaccttcccctgatgaaccaaggcgggtaagcccaggttcaggaccagag
cggccgtcagggggaacagaaatcagactccagaccaacagccgtccaaacagcccacga
gaccccaagcttgtggaggcagggagtggcagtgttcaaagcttgtccttgtctgacagt
cacctggcagagctggatggagacaccctgcgtttatttggacttggagccctggaggcc
ctggagaggggctggggtgttcagactgctggtgctgtcactgtaataaccttccgctac
atcagctttgatgccatagtaccaacactgccacgaataagagtcaagttcccaaatctg
tcgcatatgatcttcttggaaaccaacatcagccgtctgccgcagctggcagccctggct
caggtgaggcgcctagaccagctgaccatacacccagatggcaacccagtggtcagtttg
actctttggcgctcctttgtcatctatcgtcttcaccacttcaacctgcagagaatcaat
ggcctggaggtgaccatgaacgatgtgatcgctgcagaacgtgtgtttggaacactgggc
catatagcagccaccgaaactccacgttgccggctccttctgctgcttgaggagtccagg
aagcggcagttgcagttcctgttggagggccgtggccggcgggcaggactcagtccagag
gagctgcgtgataatgggaaactcctaggagaaggcctgagcagagcattgtttaactat
ccaagcagagactgcagtgcagagagccctgaggagggcagtgtggagtcgtcagagcgt
gctactatggtagagcagtacctacaggagttggtccaaagtgcatcagacaccaacctg
aagggcgaggctttacacaagctctggccttccatgtttgcagagatggtgagagactgt
gtcttggagatgagggaccgagcggccttccgccaagccagcctggcaaagctctctgag
accaagtga
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