Oreochromis niloticus (Nile tilapia): 100692976
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Entry
100692976 CDS
T06104
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03013
Nucleocytoplasmic transport
onl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100692976 (upf3b)
03015 mRNA surveillance pathway
100692976 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100692976 (upf3b)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100692976 (upf3b)
mRNA cycle factors
P-body specific factors
100692976 (upf3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
100692976
NCBI-ProteinID:
XP_003445248
Ensembl:
ENSONIG00000002536
UniProt:
I3J2T5
LinkDB
All DBs
Position
LG2:complement(18503352..18509160)
Genome browser
AA seq
464 aa
AA seq
DB search
MKEDKENTRPKEKRVEIKYEDGEKTEKSKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
EVDYLEFFSNDTSLYPHLFARAYINFKNQEDIVLFRDRFDGYVFIDNRGQEYPAIVEFAP
FQKTAKKRSKKKDAKCGTIVEDPDYKKFLEYYNGDDEKLTSTPETLLEEIEAKSKELVAK
KTTPLLDFLKNKQRLREEKKEERRRRELERKRLRDEERRKWREEERRKRKEAEKMKKLEK
PQEKDKDQAKDEPKIKLLKKPERRDEGEPEKPKEKSKKPEKPNREDRSLGGSDHKRRQNI
EHKEDRGRKGDEDGRKEFRERDTDRDRDRDREREKERRQKERERLKRQDEERRRRREQQD
GDNSFKKREEEVKKDKALEKKKGENMPDSPHTEKPEKPAKDNKKEEGGKRERLRNKDRPA
IQLYQPGARSRNRAAGGGGGGAESNSADRKPDTEARKVAEKEDD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagacaaagaaaacactcgaccgaaggagaaaagggtggagataaagtatgaa
gatggagagaagacggagaagtccaaggaaaagaaggaggccatgacaaagattgtgatc
agacgactaccaccaagtctcaccaaagaggagctggaggagcaactgcaaccgctccca
gaggtggactatttggagttcttctctaacgacacgagcctttaccctcacctctttgca
agggcttacatcaacttcaaaaaccaagaggatatagtgctcttcagagatcgctttgat
ggatatgtattcattgacaacagaggtcaggagtatcctgccattgtggaatttgcacct
tttcaaaaaactgccaagaaaagaagtaaaaaaaaggatgcaaagtgtggaacaattgtc
gaagatccagattacaaaaagttccttgaatattacaacggggacgacgagaagctaacg
tccacacctgagaccctgttggaggagattgaagctaaatcaaaggaactcgttgcaaaa
aaaacaactcctctgctggacttcctgaagaataaacagagactcagggaggagaagaaa
gaagagcgaagaaggagggaactcgagcgcaaacgtctgcgtgatgaggagcgtcgtaag
tggagggaggaggagaggaggaaacgcaaagaggcagagaagatgaagaagctcgagaaa
ccgcaggagaaggacaaggaccaagctaaagacgagccaaagataaagctcctgaagaag
ccagagagaagagatgaaggtgaaccggagaagccaaaagagaagtccaagaaaccagag
aagccaaatagagaggacagatctttgggaggttctgatcataagagacgtcagaacatc
gagcacaaggaggatcgaggaaggaaaggggacgaagatgggcggaaggagttcagggag
cgcgacacggatcgagacagagaccgtgaccgagagcgggagaaggagcgtcggcagaaa
gagagggaacgcctcaagcgacaggatgaggagcgtcggagaagaagggaacaacaggat
ggagacaactccttcaagaagcgggaggaggaggttaaaaaagataaagccttggagaag
aagaagggtgaaaacatgccagactccccacacactgagaagccagagaagcctgctaaa
gacaacaagaaggaggagggtgggaaaagagagcggctacgaaataaggaccggcctgct
attcagctgtaccagccaggtgccagaagccgcaaccgtgctgcaggaggaggaggagga
ggagctgaatccaactccgctgacagaaagccagataccgaggctaggaaagtggctgag
aaagaagacgactga
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integrated database retrieval system
