Oreochromis niloticus (Nile tilapia): 100693122
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Entry
100693122 CDS
T06104
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100693122 (snapc4)
03021 Transcription machinery [BR:
onl03021
]
100693122 (snapc4)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
100693122 (snapc4)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
100693122 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
InvE_AD
Motif
Other DBs
NCBI-GeneID:
100693122
NCBI-ProteinID:
XP_005464331
Ensembl:
ENSONIG00000011941
LinkDB
All DBs
Position
LG12:complement(3046543..3061471)
Genome browser
AA seq
1676 aa
AA seq
DB search
MSASLSGKRDKIQREVEELERSLSVTNAELELLSSGTDDDSDRENVDTPAGQSAAGLLAE
REKIQKEIQNLEEVLGPHSPIIVSDDCSSSEESDLGLSPSVDSCLQMNLVYQQVVQETLD
QLEKLLTQNQKEQKELETQLSGRIKEPSKQQPTNSSYQQPMKMYLGRFLKPYFKDKLTGL
GPPANQETKEKTSRIAGYLDDKKLKIKRWESWQKTLLIHAVSRESLRRLIQPKLSKVDYL
SQKLLSVEEADRQLIREQIDTLEREINLLRQKKEEELIGDRFEEYDWQKISNIDFEETRD
AGDIRCFWQNFLHPSINKTRWSQEEVQQLKEISRKHEERHWEIIAQELGTGRTAFMCLQM
FQRFVSGSLKRGSWTPAEDDLLRELVDKMRIRNFIPYTQMSYFMEGRDPAQLIYRWNQVL
DPSLKRGPWTKQEDKLLLQAVARHGEKNWWKIRLEVPGRTDGGCRDRYYDCLKAGTKRGP
FDRKERELLLELVEKHGVGHWAKIASEIPNRIDAQCMRTWRQMSKAADEKLGCARKPQRK
RGGDEEKKKKAAKTNNNIRRRLKAIKEEVISEEEEEEEMAIEYMDSDDEKKKKMKKTEVP
EVEKLVEVQEEQKEEELEEEYTFPPMQEWIPVERAQPFTFLNFRPVVLASSNESHNDNLM
RSTILGKSGRSVIIGPHPREVRWEERHDSGAMMMVSPDQLRAHLHNQARRFYSRSKCKTK
TSQTSRPLFMKGMTGQGVDLMLQAAVTPWIGNLLIPASTKRTAADVLRERVEKKELSSTS
VFTLFLRVMNVDVMGCKEMIERRQSGVTLMTPPSNPPPGKFKNPNTVAGILQRMHLGMQE
RSEADRWCRQTPPSQLHPSIVTQVPPNMRPQVAPLSCHQPVSIPHSDSQLNAAFSPAQHT
SRHAGVTISPFAFPAACQRQTTTPVFVVSTLQNVSSTCNQQAVPLTSLPPFLNQPVSISP
SQTAVLSPPACSRQLCLSPSNLNLPRGKKQTENHESQNGVVHASVEGEVSMSEDRKKTSN
LSQKARAPRQVTKAQAKVKKTAKTAPLKMASAPIQLLPQNVHSSQTTPPTAHPVDVIPSS
LVTSLHLTPNDSSTSGNLSFPSCQSATPSHSDGAMSSTPNFSLVPLPSSVTSQHAVSSTS
CPNSNDHDYTFLTPSPTEHGSDLSQPCPVPKQPDSNVPNGQARGKKRPRQAAEKQEVMRN
KDDQCVGRTSTGVDGKRIRKLTHKAKALQEDAQAKAEAKKKKSSTSSPRQKRSRSAGDAH
RAESKEKTSTQTPVAAPVPRLHLCPGQSMWVMTPTGLVQLGQAPPQGLEMAVINTVPPSP
GISLNQYTAPSPVQLATRGLRPIAPKLSSVPVPITLPNQPHPLPEPPICNPKPLALPSVQ
PSDLDHGHYSLPFCPPLSSTNFSPRGTVRVDAPQSRPLRKEVLEIDPSLMFLEPPAAIND
WLSGSGGVVIPGMSLSLPYLPPFVSNLSTLSGLLCAKKSLTRSSLQLVREGNKSRWPQTN
SKPDSSTKTGYNEPPPQPPPDLPDSTSDITPAEKQPASSAAAPVSSDHLQQQEKNEEEEE
EELVAAVRQLVAERFSNNPAYQLLKARFLSCFTLPALLATMPPVPKAETYQTNQEEEREE
EVEEEGEEEVELRKIKEMAKLRRAEKSLQLLCDSSGASASHFSGITDVIRPTSDQT
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctctctgtcaggaaagagggacaagatccagagagaggtagaggaactggaa
cggagtttgtctgtaaccaatgctgaactggagctcctaagcagcgggacagatgatgat
tctgatcgtgagaatgtggataccccagctggacagtctgcagcaggtctgttggctgag
agagagaaaatccagaaagagatccagaacctggaggaagtgctgggaccacacagtccc
atcattgtttcagatgattgcagcagcagtgaggagagtgaccttggcctgtcaccgtca
gtggactcatgtcttcagatgaaccttgtgtaccagcaggtggtccaagagactctggac
cagctggagaaactactaacacaaaaccagaaggagcagaaggagctggaaactcagctg
tctggacgaattaaagagccttccaaacagcagcccaccaactcctcctaccagcagcca
atgaagatgtatctaggtcgcttcctaaaaccatacttcaaggacaaactgacgggactg
ggtcctccagccaatcaggagacgaaggaaaagacgagcaggattgcagggtatctcgac
gacaagaagctgaaaataaaacgatgggagagctggcagaagactctcttgatccatgca
gtgtctagagagagtctgagaagactcatccagcccaaactctccaaggtagactacctg
agtcagaagttgctctctgtagaggaggcagacaggcagctaatcagagagcagatagac
actttggagagagaaatcaacttgctcagacagaagaaggaagaggagctgattggtgat
cgatttgaagaatatgactggcagaaaatatccaacattgattttgaagagacgagggat
gcaggggacatccgctgtttctggcagaacttcctccacccatccattaataagactcgg
tggagccaggaggaggtgcagcagctgaaggagatcagcaggaaacacgaagagagacac
tgggagatcatcgcacaagagctggggactggaagaacagctttcatgtgtcttcagatg
ttccagcgttttgtctcgggctcactaaaacgtggcagctggactccggctgaagatgat
ctgctgagagagctggtggacaagatgaggatcaggaacttcatcccatacacacagatg
agttacttcatggaaggtcgtgaccctgcacagttgatctacaggtggaaccaagtttta
gatccgagcctgaagagagggccatggaccaagcaggaggataagcttctgctacaagct
gtggctcgtcacggagagaagaactggtggaagatcaggttggaagttcccggacgcact
gatggaggctgcagagacaggtattatgactgtctgaaggcagggacaaaaagaggccca
ttcgacaggaaggagagggagctgctactggagctggtggagaaacatggagtcggtcac
tgggcaaagatcgcatctgagattcccaaccgtattgatgctcagtgtatgaggacatgg
aggcaaatgagcaaagctgcagatgagaaattagggtgtgctagaaaaccacaaaggaaa
cgtgggggagatgaggagaagaagaagaaggctgctaaaaccaacaacaacatcaggaga
cgcctcaaggcaataaaagaagaagtgatcagtgaggaggaggaggaggaagagatggcg
atagaatacatggacagtgatgatgagaagaaaaagaagatgaaaaagacagaggtacca
gaagtggagaaactagtggaagtgcaagaggagcagaaggaggaggagttggaggaagaa
tacactttcccacccatgcaggaatggattccagttgaaagagcccaaccatttactttc
ttgaactttcgtcctgtggtgttggcttcctccaacgagtctcacaatgacaatttaatg
cggtcgaccattttggggaagtctggacgctctgtaatcatcggaccacatcccagggag
gtgcgatgggaagaacgccacgacagcggcgccatgatgatggtgtcacctgaccagctc
cgagcccacttgcacaatcaagcgcggaggttttacagtaggtctaaatgtaagacaaag
acttcccaaaccagcaggccactctttatgaaaggaatgactggccagggggtagatctc
atgcttcaggctgcagtgacaccatggatcggcaacctgctgatcccagccagcaccaaa
agaacagcagcagatgtcctgagggagcgagtagagaagaaagagctttcttcaacatct
gtcttcacgctgttcctcagagtcatgaatgtggatgtcatggggtgcaaggagatgata
gagcggaggcagagcggggtgacgttaatgactccaccttccaatcctcctcctggcaaa
tttaagaatccaaatactgtggcaggaatacttcagcggatgcatttgggcatgcaggag
cgatctgaggcagacaggtggtgcagacaaactcctccttctcagctccacccatcaatt
gttactcaggtgcctcctaacatgcggcctcaagttgctcctttgtcatgtcatcagcct
gtctcaattcctcattctgactcacagctgaatgctgctttctctccagctcaacacaca
tctcggcatgcaggggtcaccatttctccatttgcttttcctgctgcttgtcagaggcag
actaccactccagtttttgtggtctcaacgctccagaatgtctcctctacctgtaaccaa
caggctgtacctttgacctcattgcccccattccttaatcagcctgtatctattagcccc
tcacaaactgctgtcctctcccctcctgcctgttcccgccaactttgcctttccccctcc
aacctaaatctacccagaggaaaaaagcaaacagagaatcacgagagtcagaatggggtt
gtacatgcaagtgtggagggagaagttagtatgagtgaggacagaaagaagacttcgaat
ctcagtcagaaggccagagctccacgccaagtcaccaaagcacaggctaaagtaaaaaag
acagcaaagacagctccattaaagatggccagtgctcccattcagctgctacctcagaat
gttcactcctcccaaaccacacctcctacagctcatccagttgatgttatcccttcttca
ttagtcacatctcttcatctcacaccgaatgactcttcgacttctggtaacctgtccttc
ccgtcatgccagtctgccacgccttcccactcagacggagccatgtcttcaactccaaac
tttagtttagtcccactcccctccagtgtgaccagccagcatgctgtttcctccacttcg
tgcccaaactcgaacgaccacgactacacatttttaacacctagccccactgagcatggg
tctgacttgagtcagccttgtcctgtcccaaagcagccagacagcaatgttcccaatggc
caggccagaggaaagaaaagaccaaggcaagcagcagaaaagcaggaagtaatgagaaac
aaggacgaccagtgtgtgggcaggacaagtacaggtgtggacggaaagcgaattcgaaag
ctgactcataaagccaaagctctgcaggaagatgctcaggccaaggctgaagccaagaag
aaaaaatcttctacctcgtctcctcggcagaagcgctctcgcagtgctggcgatgctcac
cgtgcagaatctaaagagaagacgagcacacagactccagtcgctgctccggtgcccaga
ttgcatttatgtccgggtcagtcaatgtgggtcatgactcctacaggcctggtccagctt
ggacaagccccgccccaaggcctggagatggcggtaataaacactgtccctccttcccca
gggattagtttaaaccaatacacagccccatcacctgtccagcttgccaccagaggcctg
cggccaattgcacctaaactgtcctctgtgcctgtaccgataacccttccaaatcagcct
cacccactccctgagccacccatttgtaacccaaagcctctcgccctaccctcagtgcag
ccatctgacctagaccatggtcactactccctccctttctgtcccccactgtcttccact
aacttctcaccgcggggcacagtcagagtggatgccccacagtccaggccactgaggaag
gaggtgctggagatcgacccctctcttatgttcttggaacccccagcagccataaatgac
tggctaagtgggtcaggaggggtggtaataccaggaatgagcttgtccctgccctacctt
ccgccctttgtcagcaatctgagcacgctcagtggactgctttgtgccaagaagtcccta
accaggtcgtccctgcagctggtgcgtgagggcaacaaatccagatggccccagaccaat
tccaagcctgacagcagcacaaagaccggctacaatgagcctccacctcaacctccacca
gacctgccggactccacctcagacatcacacccgctgagaaacaaccagcgtcctctgca
gccgcccctgtcagctctgaccacctgcagcagcaggagaagaatgaggaggaagaggag
gaggagctggtggcagcagtgcgtcagctggtagctgagcgtttctcaaataatcctgcc
taccagttgctgaaggcacgttttctgtcttgtttcactctacccgcactcctggctacc
atgccaccagtcccaaaggctgaaacctaccagaccaatcaggaagaggagcgggaagag
gaggtggaggaggaaggagaagaagaagtggagctaaggaaaatcaaagaaatggcgaaa
ctgaggagagctgagaaatcactgcagctgctgtgtgacagctctggagcttcagccagt
catttttcagggatcacagatgtcatcagacccacgtcggaccagacctga
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integrated database retrieval system
