Oreochromis niloticus (Nile tilapia): 100693136
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Entry
100693136 CDS
T06104
Symbol
fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100693136 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100693136 (fip1l1)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100693136 (fip1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Peptidase_M15_3
Motif
Other DBs
NCBI-GeneID:
100693136
NCBI-ProteinID:
XP_005478932
LinkDB
All DBs
Position
LG23:37447215..37471272
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AA seq
353 aa
AA seq
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MTDTRYKGLESHPGTTNDLLLEKVQGNEEINQKVEFLEKKPWRKAGANISDYFNYGFDEE
SWNAYCRKQAELRGMIRKAQKRHTGYEEEEVFCGYSSSGRPSILAFRESDPITNLAGGQP
ESSREDGHQCHNDGGSNTQVFCEMCHYEDSSSAYQLPPPLSKNSFFKFIKKRVPPRPQPP
SSTATSGSGNSTGFNSPSASLYPYSSRRITISPGVIDTTNARECYISQEKHDKDRDRSRA
HGQDKENKRSRYREKEGCSSSYYREAQMKHRESRNQGYQYRYDRGSGKKRKSNKDDGSRK
RSESSSVRSSRSSRDVGGNRDSRHKHRKAQTWRKNKETSKEFSPNKKRKLKSD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacgagatacaaagggttggaatcccatccaggtactacaaatgacctattg
ttagaaaaagtccaaggaaatgaagaaattaaccagaaagtagagtttttagagaaaaag
ccatggagaaaagctggtgctaatatctcagattactttaactatggttttgatgaagaa
agctggaatgcttactgtaggaaacaagcagaacttcgtggcatgataagaaaggcccag
aagaggcacactggatatgaagaagaggaggtgttttgtggttattcttcctcaggcaga
ccatctattctagctttcagagagtcagatcctatcactaatttggctggaggacaacct
gaatccagcagagaggatgggcaccaatgtcataatgatggaggcagcaacactcaggtt
ttttgtgagatgtgccattatgaggacagcagtagtgcttatcaactgccacctccactc
agcaagaactctttctttaaatttattaaaaagagagttccaccacgtccccaacctccc
tcctctactgctacttcgggcagtgggaactctacaggttttaacagcccatcagcttca
ttatacccgtattcatcaagaagaatcaccatcagccctggagtgattgataccaccaac
gctcgggaatgctacatatcgcaggaaaagcatgacaaggatagagacagatccagagcg
catggtcaagataaagagaacaaaagaagcagatatagagagaaggagggctgctcctct
tcctattatagggaagcacaaatgaagcacagggagtctaggaaccaagggtaccagtat
cgctatgacagaggcagtggaaaaaagagaaagagcaacaaagatgatggatcacgaaaa
agatcagaaagcagcagtgtcaggagcagcagaagtagcagagatgttggtgggaacagg
gacagtagacacaaacacagaaaagcccagacatggaggaagaacaaggaaaccagcaag
gagttctctcctaacaaaaaaaggaaattaaaatctgactga
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