Oreochromis niloticus (Nile tilapia): 100693366
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Entry
100693366 CDS
T06104
Symbol
neo1
Name
(RefSeq) neogenin isoform X2
KO
K06766
neogenin
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04350
TGF-beta signaling pathway
onl04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100693366 (neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100693366 (neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100693366 (neo1)
Cell adhesion molecules [BR:
onl04515
]
Immunoglobulin superfamily
DCC/UNC5 family
100693366 (neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
Ig_Rha78A_N
fn3_2
NDNF
C2-set_2
Tissue_fac
Sp38
EphA2_TM
TM_ErbB1
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
100693366
NCBI-ProteinID:
XP_005455737
Ensembl:
ENSONIG00000005730
LinkDB
All DBs
Position
LG1:complement(10829849..10982900)
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AA seq
1479 aa
AA seq
DB search
MAERGALSLLSLLCLTFLYTETTAAKHVDKGSAVQPFSPFWFTVEPQDTLAIRGNSAFLN
CSAHSDAATPAHIEWKKDGTFMSLVSDERRKILPNGTLFFTHVVHSKHNKPDEGTYQCVA
TIENLGSISSRTARLSVAGMPRFASQPLPATARLGDSQVMACEVNSDLVAFIRWEKDRQP
LELSTRLIQLPSGALVISNASETDAGTYRCLVENVGSSKLSDEAELQTVPETGEERKLEF
LVQPVSVTKVTDASVLLPCVATGYPAPRISWMFGDKLLEESDGRVEVLGGGSLQISNLTE
ADAGIYTCVADNSNTTIEAQAQLTVQVPPQFVKRPANVYAHESMDIVFECDVSGSPAPTV
KWVKNGDAVIPSDYFKIIEDHNLQILGLVKSDEGFYQCLAENDAGNIQSSAQLIILDPVV
ALPSFPPPSLTPNTTDHVTPGSRGVGSPAGPTPSAPRDVVASLVSTRFIKLTWRQPAEPH
GDELTYSIFYSQEGTSRERVVNTSRPGEMQVTIQNLMPDTKYRFRVVAHNSNGQGESSAA
LKVATQAEVQVPGPAPNLQAVSNTPTSVFLSWDKPLTGNGEILSYKLYYTDKSVGKEQDI
DIDGQSYSMAGLKKNTEYSFRVVANNRHGSGVSTEDVVVRTLSDVPSAPPQNLTIEVQNS
KSIMLRWQPPPLSGQNGKITGYKIRYRKGSRRSESETTEGTQLYKLLDGLEHGTEYSFRV
SAMTVNGTGPATEWMTAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIMVR
GYAIGYGIGSPHAQTIKVDYKQRYFTIENLDPSSHYVITLKAFNNVGEGIPVYESAVTRA
QSDPDVDLYDLLHAPYTPVPDPLPMMPPVGVQASVLSHDTIKVTWADNSLPKSQKVTDNR
YYTVRWKTNIPANTKVKMVNTTNLSYTVPDLKPNTLYEFSVMVTKGRRVSTWSMTAQGTT
FETTPSSAPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAVVHDWVIEP
VVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEPVQFRTPKTESSDKMANDQASNLT
PKMGPSGNQPPRDPVPPRIKDGENHILVIVIIISVGAFTIIVVVVGAFLCTRRTTSHQKK
KRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPEPNPVMTETPIPRTSQDI
TPADSGLESNPHLQQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPI
HSLDNHHHYYNMGSLSSATRSYLYHQGSGYPRPHTCTTPISHLDRVDSTESVRNTPSSEP
APPATASSQASCPSEILADPEGSYHGSTTTEEEPSYSSNLPPLRSAHPHAHAHPLKSFAV
PAIPASSHPSYESPALPSTPLLTQTGPPTHPHVVKTASIGTLGRTRTPMVVTVPNAPDVP
ETSKMLEDVDSVLASLPPCPSPAPAVTLFLSPRATSPTS
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgtcgctcctctctctcctctgtctcacctttctctacacg
gagaccaccgctgcaaagcatgtcgacaaaggttcagcagtgcagcccttcagccccttc
tggttcaccgtggagccccaggacacgctggccatccgggggaactccgctttcctcaac
tgctctgcacacagcgacgcagccacgccggcacacatcgaatggaagaaagacggcacc
ttcatgagcctggtttcagacgagaggagaaaaatactgcccaatggcacgctgttcttc
acccacgtggtccactctaaacataacaagcccgacgaaggaacctaccagtgtgttgcc
accattgagaacctgggatccatttccagccgcacggcacgcctctctgtagcagggatg
cccaggttcgccagccaaccgttgccagccactgcgcgacttggggacagtcaggtgatg
gcatgtgaggtcaactcggatctggtggccttcatccggtgggagaaagaccgacaaccc
ctggagctgagtaccaggttgatccagctaccgagtggagccctggttataagcaatgcc
tcggagacggacgctggcacgtaccgctgccttgtggaaaacgttggctcttccaagttg
agcgatgaggccgagctccaaactgtaccagaaactggagaggagaggaagctggaattc
ctggtgcagcctgtgtctgtgaccaaggtgacggatgccagcgtgctgctgccctgtgtg
gccacgggttaccctgcaccacgaatcagctggatgtttggagacaagctgctggaagag
agtgatggtcgtgtggaggtgctgggagggggcagtctccaaatttccaacctcaccgag
gcagacgctgggatctacacctgtgttgcagacaattccaacaccaccattgaagcccag
gcccaactcacagtacaagttcccccgcagttcgtgaagcggccggccaacgtttatgcc
cacgagtccatggacatcgtctttgagtgcgatgtgtcggggtcaccggctcccacggtc
aaatgggtcaagaatggagacgccgtcattcccagcgattacttcaaaataattgaggac
cacaacctgcagattttgggtctggtcaagtcagacgagggcttctaccagtgcctggca
gaaaacgatgcgggcaacatccagtccagcgcccagcttatcatcctggatccagtcgta
gccctgccctctttccctcccccttcactgactcctaacactactgaccatgtaacacca
ggctccagaggtgtaggcagtccagcagggcctaccccctcggccccccgagacgtcgtg
gcttcgctggtgtccactcgcttcatcaagctgacctggcgtcaaccagccgagccacac
ggagacgagttgacctactccattttctacagccaggagggcacgagcagggagcgagtc
gtgaataccagtcgtccaggggagatgcaggtcaccatccagaacctcatgccagacacc
aaatatcgcttcagggttgtggcccacaatagcaacggccagggcgagagctctgcagcg
ctcaaagtggccacccaagctgaagtccaagtacccggcccggctcctaacctgcaggcg
gtgtccaacacgccgacctccgtttttctcagctgggacaaacccctcactggcaatgga
gagatcctctcgtacaagttgtactacacggacaagagcgtcggcaaagagcaggatatt
gacatagatggccagtcgtacagcatggcggggctgaagaagaacacggagtacagtttc
cgcgtggtggccaacaacaggcacggttctggcgtctccactgaggacgtcgtcgttcgc
actctgtctgacgtaccaagtgccccgcctcaaaacctgaccatcgaggtccagaactca
aagagcatcatgcttcggtggcagcccccgcccctgagcggccagaacgggaagatcacc
ggctacaagatacgataccggaaaggatcccgcaggagcgaatctgaaaccactgaaggc
acccagctttacaagctcttggatggtctcgagcatggaacggagtactccttccgagtg
tcagccatgacggtaaatggcacgggaccggccaccgagtggatgacggcagagacgttt
gagagcgacttggatgagtcccgcgttccggaccagcctagctcgctgcacgtccggccg
ctggtcaacagcatcgtggtgagctggacgccgccggagaaccaggacattatggtgcgc
ggttacgcgatcggctacggcatcggcagtccacacgcgcaaaccatcaaggtggactac
aagcagcgctacttcactatcgagaacctcgaccccagctcccactacgtgatcacacta
aaagccttcaataacgtgggtgaaggcattcctgtgtacgagagcgccgtcaccagagca
cagtcagaccccgatgttgacctgtacgacctcttacatgctccatacaccccagtacca
gaccctctccccatgatgccgccggtgggcgttcaggcgtcggtgctgagccacgacacc
atcaaggtgacctgggccgacaactcgctgcccaagagccaaaaggttacagataaccgc
tactacacagtgcgatggaagaccaacatccctgccaacactaaagtgaagatggtcaac
accaccaacctgagctacacggtgccagatctgaagcccaacacgctgtacgagttctcc
gtcatggtgaccaaaggccgccgcgtcagcacatggagcatgacagcccagggcaccacc
tttgagaccactcccagctccgccccgaaggatgtgactgtggtgagcaaagagaacaaa
ccacgcaccataattgtcaactggcagcctccctctgaggccaatggaaaaatcactggc
tatatcatctactacagtacagatgtaaacgccgtggtccacgactgggttatcgaacca
gtggtgggcaatcgtctgactcaccagatccaggagctaacgctggacaccacctactac
ttcaagattcaggcccgaaactcaaagggcatgggccccatgtctgagcccgtgcagttc
cgcactccaaaaactgagtcctctgacaaaatggctaatgaccaagcctcaaatctcaca
ccaaagatgggaccttcaggaaaccaacctccacgggaccctgttccaccaagaattaaa
gatggggaaaatcatatcctggtcattgtcataatcatctcagtgggagctttcaccatc
atagtggtggtagtgggggccttcctgtgcacgcggcgcaccacatcccaccagaaaaaa
aaacgggctgcctcaaaatcctccaacggctctcacaaatacaaggggaactccaaagac
ctgaagccacccgatctttggattcaccatgagaggctggagcttaaacccatggacaag
tcgccagagcccaacccagtcatgactgaaacccccatcccccgcacctcacaggacatc
acccctgctgacagcggattggaaagcaacccccacctgcagcagaggcgcaactcctac
cgtggccacgaatcagaggacagcatgtctacactagcaggccgacgagggatgaggcct
aaaatgatgatgccttttgatgcgcagccgcctcagcccgtgattagcgctcaccccatc
cattccctcgataaccatcaccactattataacatgggcagcctgtcgtcggcaacacgc
agctacctctaccaccagggcagcgggtacccacgcccgcacacctgcaccacccccatc
tctcatctagacagggtggactccacagagtctgtgaggaacactcccagctctgagccc
gcccctcccgccaccgcctcctcccaagcctcctgcccctcagagatcctggctgaccca
gagggtagctaccacggctccaccaccacagaggaggagcctagctactccagcaaccta
cccccactccgctcagctcacccgcatgcccacgcccacccgctcaagagcttcgctgta
cctgcaatcccagcctccagccacccatcctatgagtctcccgccttgcccagcactccc
ctgctcactcagaccgggcctcccactcacccgcatgttgtgaaaacagcctccatcgga
acactaggaaggacacgaacaccgatggtggtcactgtgcccaacgcccccgatgtacca
gagaccagcaagatgctagaagatgtagacagcgtgcttgcctccctccccccctgcccc
tcccccgcccccgcagtaaccctgttcctctcccccagagctacgagcccgacgagctga
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