Oreochromis niloticus (Nile tilapia): 100693368
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Entry
100693368 CDS
T06104
Name
(RefSeq) protocadherin-1 isoform X2
KO
K16498
protocadherin delta 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100693368
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
onl01009
]
100693368
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100693368
Protein phosphatases and associated proteins [BR:
onl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100693368
Cell adhesion molecules [BR:
onl04515
]
Cadherins
Protocadherins
100693368
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Protocadherin
PepSY
HeLo
Motif
Other DBs
NCBI-GeneID:
100693368
NCBI-ProteinID:
XP_013130466
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All DBs
Position
LG11:36519482..36527716
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AA seq
652 aa
AA seq
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MTVLRCEVVLFLATILVSCSSSLTHLNIRVDRGKLLRWSRSVTVSHQQDNAPEFDRSHYE
AELLENSLLGQSVLQVRASHADIATGEMNYSLHQVSETVQRLLRIDSVTGIIYVKGLVDR
EEERILKLFVVARDRGPSSRIKSSKVLVTINVTDQNDNAPSINIQGIGLVKYQDGVSKIS
EDLPVGTPVALVQVSDRDEGENAVVTCAVDGDVLFQLQPASDQKGKYFLQTTTLLDYESV
KNYSIEIVAVDSGSPALSSTLSLIVQVTDVNDNAPNFSPATIEVDFPENNYRGQKLLDLV
ATDPDSGINGQLVYSIIDRFAKRLFEVDANTGEVRVRTVLDREERERYVFCVAAADMGVP
RKTGTATIIVNVQDQNDNDPVFILKGYSFTAAENMPPPSRVGAVAVLDADKDENSHLRLF
VEPDNGNFFIQNGTGIILSRISFDREKERFYTFCLKAVDGGDPPRSSYVSVIINVLDEND
NAPYVTKPDNSSYTYLSYFTPAGTYVEVVKAEDTDTGLNAELDYFIVGGNPHGLFQISPY
NGEITLAQEVTGKHSGLHRLVVRVCDKGRPPLCTTALVHVFINGTESNISLIEALVTESL
STPLEKDVAGDLLGSSALVQHSNILYGSLAGIAHVIQTFSSIVSNTAKEDSN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgcttaggtgtgaagttgtgctgtttctagccaccatcctggtgtcttgcagc
tcttcactcactcacctgaacatcagagtggatcgtgggaagctgctgaggtggagcagg
tcagtcactgtgagtcaccagcaggacaatgctccagagtttgacagaagtcactacgag
gccgaactcttagaaaacagcctgctgggacagtctgtgctgcaggtcagagccagtcat
gcagacattgccactggtgagatgaactacagccttcatcaagtatcagagactgtccaa
aggcttctgcgcattgacagtgtgacaggcatcatctatgtgaaaggccttgtggatcga
gaggaagaaaggatcctcaagttgtttgtggtggcccgagatcgtggccccagttccagg
atcaagagttccaaggttctggtgaccataaatgtcacagatcaaaatgacaatgcaccg
agcattaacatccaaggtataggcttagtaaaataccaggatggtgtgtctaagatttct
gaggacctgcctgttggtacaccagtggcactggtccaggtgtcagaccgggatgaaggg
gaaaatgctgtggtaacgtgcgcagttgatggcgatgttctatttcagctccagcctgca
agtgatcagaagggcaaatacttcctgcagacaacgaccctgctggattatgagagcgtt
aaaaattacagtattgaaattgttgcggtggattctggaagcccagctctgtccagcact
ctctccctcattgtccaagttacagatgttaatgataatgcaccgaacttttcccctgca
acgattgaggtggactttccagaaaacaactacagaggacaaaaactactggatcttgtg
gcaacagatccagattctggcataaatggacagcttgtctatagcatcattgatcgtttt
gccaaaaggctctttgaagttgatgccaacactggggaggttcgtgtgagaaccgtgttg
gatcgggaagagagggagcgttatgtgttctgtgtggcagcagcagacatgggtgttcct
aggaaaaccggcactgccacaataattgtaaatgttcaagatcaaaatgacaatgaccct
gtgtttatactcaagggctacagctttactgctgcagagaacatgcctccacccagtcgt
gttggtgcggttgctgtcttagatgctgataaggatgaaaattcccacctaagactgttt
gtggaaccggacaatggcaattttttcatccaaaatggcacaggaatcatcttgtctaga
atctcctttgaccgtgagaaggaacgtttctacactttctgcctaaaggccgtggatgga
ggtgacccacctcgatcctcctatgtgagcgtgatcatcaatgtcttagatgagaatgat
aacgctccatatgtcaccaaaccagacaactcctcctacacatacctatcatatttcacc
ccagcaggcacgtatgtggaggtagtgaaggctgaggacactgacactgggctcaatgct
gagctggactattttattgtaggtggaaatccacatggtctgtttcaaatatctccctac
aatggggagatcacactggcacaggaagtgaccggcaagcacagtgggctacatcggctg
gtagtgagagtctgtgataaaggcagacctcctctctgcaccactgcactggtccacgtt
tttatcaacggtactgagtccaacatctccctcattgaggcgctggtcacagagagcctc
tccacccctttggaaaaggacgttgccggagatcttttagggagctctgctcttgttcag
catagcaatatcctgtacggcagcctcgcaggtattgctcatgtgattcagacattcagc
tctatagtttctaatacggccaaagaggattccaactag
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