Oreochromis niloticus (Nile tilapia): 100693379
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Entry
100693379 CDS
T06104
Symbol
trim23
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM23
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100693379 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
onl04031
]
100693379 (trim23)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100693379 (trim23)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100693379 (trim23)
GTP-binding proteins [BR:
onl04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
100693379 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
100693379
NCBI-ProteinID:
XP_005459740
Ensembl:
ENSONIG00000015424
LinkDB
All DBs
Position
LG7:complement(12023174..12032851)
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AA seq
610 aa
AA seq
DB search
MLIERKRTKPEVLLGIVLSNLLGSLRCRPRMAAAAAGINKQGAVATMEPCIRHGRGANGS
TVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAVRCPFDRQVTELGDS
GVWGLKKNFALLELLERLQNGATNQSGMAEDALKGMGECIIRCDEDESHTASMYCTVCAT
HLCGECSQLTHSTRTLAKHRRVPLADKPHEKTLCPQHQVHAIEFVCLEEACQSGPLMCCV
CKEYGKHQGHKHAVLETEANQIRASILDMAHCIRTFTEEVSEYSRKLVGIVQQIEGGEQI
VEDGVGMAHTEHVPGTAESARSCVRAYFADLHETLCRQEEMALSVVDAHVRERLIWLRQQ
QEDMTILLSQVSTACLHCEKTLQQDDCRVVLAKQEINCLLETLQKQQHQFTELADHIQLD
AGIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVE
YKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVIDSCHRDRLMEAHSELAKLLTEKELR
DALLLIFANKQDVPGAVSVEEMTELLSLHKLCCGRSWHIQGCDARSGMGLHEGLDWLSRQ
LVAAGVLDVA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctaatagagcgaaaaagaacgaaaccggaagtgcttctggggattgtcctctcaaac
ctgctcgggtctctgcgctgtcgtccaagaatggccgctgctgcagcaggaataaacaag
cagggcgccgtagcgacgatggagccctgtatccgacacgggagaggagctaatgggagc
acggttaaggtgctggaatgtggtgtttgtgaggatgtcttctctctccagggggacaag
gtccctcgtcttctgctctgcggccacacggtgtgccatgactgtctaacccggttgccc
ctccatggcagagcggtccgctgcccctttgacaggcaggtcactgagctgggggactct
ggagtttggggtctaaagaaaaactttgctctgcttgaactcttggagagactccagaat
ggagcgactaaccagtcaggaatggcagaggatgccttgaaaggcatgggagaatgtata
attcgctgcgatgaggatgagagccacacagcctccatgtactgtaccgtgtgtgccacc
cacctgtgtggcgagtgctctcagctcacccactccactcgaacactggccaaacaccgg
cgggtgccactggccgataagccccatgagaagaccctgtgtccacagcatcaggtccac
gccatcgagtttgtctgcctggaggaagcttgtcagtccgggcccctcatgtgctgtgta
tgtaaggagtatggcaagcaccagggccataagcatgccgttcttgagactgaagccaat
cagattcgtgcatccattctcgacatggcccactgtatccgaaccttcacagaggaggtg
tccgagtactcgaggaagttggtgggcatcgtgcagcagatagaaggtggcgagcagata
gttgaggatggagtaggcatggcacacactgaacatgtccccggcacagcagagagcgcc
cgctcctgcgtccgagcttattttgcagatctgcacgagaccctgtgtcgacaggaggag
atggcgctgagcgtggtggatgcacatgtaagggagaggctcatctggctgaggcagcag
caggaggatatgaccatcctgctgtctcaggtgtccaccgcctgcctgcactgtgagaaa
acacttcagcaggacgactgcagagttgttctggcaaagcaggagatcaactgtttgctg
gagacgcttcagaagcagcaacaccagttcactgagctggcagatcacattcagctggat
gctggcatcccagtcaccttcactaaggacaacagggtccacattggtccaaagatggag
atccgcgtagtgactctggggctcgatggcgctggaaaaaccaccatcctcttcaagctg
aagcaagacgagttcatgcagcccatcccaaccattggtttcaatgtggagacggttgaa
tataagaacctaaaattcaccatctgggatgtgggtgggaagcacaagctcagacccctc
tggaaacactattatctaaacactcaagcggtggtgtttgtgattgacagctgccaccgg
gatagactcatggaggcccacagtgagctggccaaactgctgacagagaaggagctgcga
gatgccttgctgctcatctttgcaaataaacaggacgttcccggcgctgtgtctgtggaa
gagatgacggagctgctgagtctgcacaagctgtgctgtgggaggagctggcacattcag
ggctgtgacgcccgcagcgggatgggcctccacgaggggctggattggctctccagacag
ctggtagctgccggcgtcctggacgtcgcctaa
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integrated database retrieval system
