Oreochromis niloticus (Nile tilapia): 100693580
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Entry
100693580 CDS
T06104
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100693580
Transcription factors [BR:
onl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100693580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100693580
NCBI-ProteinID:
XP_003458966
Ensembl:
ENSONIG00000000602
UniProt:
I3IVX6
LinkDB
All DBs
Position
LG3:1663106..1667308
Genome browser
AA seq
307 aa
AA seq
DB search
MYSMMEHELKPTGQPPSHQTSQGMSPVTGTMTGNMGSNGNSHPSSKTACAPGADPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLNDAEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPLLKKDTQVGKYPLTAGNLLVAAAQSQGGSPRMESYGWGPTGGYA
GMQGEALGYTQQLHRYDLSALQYPPAMTAPQTYMNGANSYSPMSYSSSPQQPSPVTMSMV
KSEPVSHSPPTGTPNHHRGALQGDLRDMISMYIPGPGGDASDPSTAQRGYTSVQQHYLTG
TVPLTHI
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagctgaagccgactggccagcccccttctcatcagacc
tcccagggaatgtcaccggtcaccggcaccatgaccgggaacatgggcagcaatggaaac
tctcacccgagctctaaaacggcatgcgcacctggagccgaccccatggataaagtcaag
cggcccatgaacgctttcatggtctggtccagagggcagaggcgcaagatggcacaagaa
aacccgaaaatgcacaactctgaaatcagcaagcggctcggggccgagtggaaacttctg
aacgatgctgagaagcggcctttcattgacgaggccaagcggctccgtgcggtccatatg
aaggagtaccctgactacaagtacaagccacgacgcaagacaaagcctttactcaaaaaa
gacactcaggtaggcaagtacccactgacagcgggaaacctgctggtggcagcggcacag
agccaaggtgggagccccaggatggagagctatggctggggccccaccggaggatacgcc
ggcatgcagggcgaggcactgggctacacgcagcagctccaccggtatgacctgtcagct
ctccagtacccacctgcaatgacggcgccgcagacgtacatgaacggggccaactcatac
agccccatgtcatacagcagcagtccacagcagcccagccctgtcactatgtccatggtg
aaatcagaaccagtgtcccactctcctcctacgggaacgccaaaccaccatcggggggct
ttgcagggtgacctcagagacatgatcagcatgtacattcctggacccggaggagatgcc
agcgacccttcgacagcacagaggggctacaccagtgtccagcagcactacctcactgga
actgttcctctcacacacatctag
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integrated database retrieval system
