Oreochromis niloticus (Nile tilapia): 100693712
Help
Entry
100693712 CDS
T06104
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04510
Focal adhesion
onl04512
ECM-receptor interaction
onl04514
Cell adhesion molecule (CAM) interaction
onl04517
IgSF CAM signaling
onl04518
Integrin signaling
onl04672
Intestinal immune network for IgA production
onl04810
Regulation of actin cytoskeleton
onl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100693712 (itga4)
04514 Cell adhesion molecule (CAM) interaction
100693712 (itga4)
04517 IgSF CAM signaling
100693712 (itga4)
04518 Integrin signaling
100693712 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100693712 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100693712 (itga4)
04810 Regulation of actin cytoskeleton
100693712 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100693712 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
100693712 (itga4)
04515 Cell adhesion molecules [BR:
onl04515
]
100693712 (itga4)
04090 CD molecules [BR:
onl04090
]
100693712 (itga4)
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100693712 (itga4)
Exosomal proteins of other cancer cells
100693712 (itga4)
Cell adhesion molecules [BR:
onl04515
]
Integrins
Integrin alpha subunits
100693712 (itga4)
CD molecules [BR:
onl04090
]
Proteins
100693712 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
100693712
NCBI-ProteinID:
XP_013130711
Ensembl:
ENSONIG00000006861
UniProt:
A0A669BVM8
LinkDB
All DBs
Position
LG16:23936372..23959554
Genome browser
AA seq
1026 aa
AA seq
DB search
MKVSAASVSALVMVLVQALVPPAAGYSLDQDHSLEFKGPPSSMFGYSVLLYRHNTESWLV
VGAPVANTSFDGSVSPGAVLRCSIAAVGPRECHHMTADVTRCGKTCEAERDHQWMGVSLS
RQPEKEGGHILACGHRWKNVFYSKKDGQNNKLPNGVCYRFGSDMKTYNAMIPCYRDHQRK
FGEDYGSCQAGISNFLTEDLVIMGAPGTSYWTGSVLVYNTTSGKISAYLDNDNTEAVKFG
SYLGYSVGAGHFLSPASVEVVGGAPQYNQKGKVFIFTADNSVLRIVAQVSGKELGSYFGS
SVCVVDLNADGLSDLLVGAPMATGNVREEGRVHVYINQGQAKLEEEQFQLTGSNAYAARF
GESIADLGDLDDDGYPDVAIGAPHEDDLKGAVYIYNGRKEGISSTPSQRITGSTLGHDLR
MFGQSLSSGIDIDDNGYKDVAVGAFLSDSAVVLRTRPVIQVNASLILPEQIDDRMALCRE
LRHPAPCFNVTICFSVQSRHFRGHIDLQYNLTSDLLHKPSFPPRFFFHGNGSSNITNERV
RARQGHLTCVTHVAYQRKDVRDIFTPVQFVVSYSLRETNSRRASSTSFPPLKPILQRSAG
HRNTITSQTRFARSCSLVNCSTNMQLSAHLVLPHQQEYFALGSGQTIMLKASLLNSGDDA
FLPRLTLRLPSNIHYIKVLQNEDNVVRCDVTQEVNATTVGVDCSVTSFLLPAHTQLNISF
LLDVNQNSTPGQNLIHVNASSDNYERREYLHDNSISLTLPLKYGVNVNIHGFVTPSSFEI
GDEDLIPTNCYSESFNYTYKVLNSGPSRSVDTVVEIALPKILAPYRHRLLQVIDWQSSQG
VCYISDTTVSVINDCDVPQASFIKQLIFFFSPTSTRRMFCGRTDKACEWLVCRLGNLEAG
REVTIQLEANLNPAVLRQAPGRHGIMILESTAVMSSPKQDNNTILIQDHPVAQVLVEAVF
TQKPSAMVKIFIVVVSLAVGLTILAALIWCLWKAGFFKRELHHKEEEFNRDSWDFVPKHS
KRESTT
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtctccgcggccagtgtgtctgcactggtcatggtcttagttcaggccctggtt
cctcctgctgcaggatacagtctggatcaggaccacagtctggagtttaaaggcccgcct
tcctccatgttcggatactcagtcctgctgtatcgccacaacacagagagctggttagtt
gttggagcgccagtcgcaaacacatccttcgatggttcagtgtctccaggagctgttctc
cgctgcagcatcgctgctgttggaccccgggaatgccaccacatgactgctgatgtgact
cggtgtggaaagacgtgtgaagccgagcgtgatcaccagtggatgggcgtcagtttatcc
agacaacctgaaaaggaaggaggacacatcctggcctgtggtcaccgctggaagaacgtc
ttctactcaaagaaagatggtcagaacaacaagcttcccaatggggtgtgttatcgtttt
ggcagcgacatgaaaacttacaacgctatgatcccctgttacagagaccaccaaaggaag
tttggggaggattatggatcatgtcaggcgggtatttccaacttcctgacagaggatctg
gtcatcatgggggcaccagggacatcttactggacgggttcagttctggtctataacacc
accagcgggaagatttcagcctacctcgataatgacaacactgaagccgtcaaatttgga
agctacctgggctattctgtcggagctggtcacttcctgagtcctgcaagtgtggaggtg
gtgggtggagctccacaatacaatcagaagggaaaggtcttcatctttacagcagacaac
agcgtgctacggattgtcgcgcaagtgtctggaaaagagctgggatcctacttcggctcc
agcgtctgtgtggtggacctaaacgccgatggattgtcagacctgttggtcggtgctccg
atggcaacgggcaacgtgagagaagaagggagagtccatgtgtacatcaaccaggggcag
gcaaagctagaggaggagcagtttcagttgactggcagcaacgcctacgccgcccgattt
ggagagagcatcgcagacctgggagacctggatgacgatggttaccctgatgtggcgatt
ggtgctccacatgaagacgaccttaaaggagccgtttacatctacaatggcagaaaagag
ggcatctcatcaactccatcccagaggattactggatccacccttggccatgacctcagg
atgttcggccagtcgctgagctctggcattgacattgatgataacggttacaaagatgtg
gcagttggtgcgttcctttctgactcagctgtggttctcaggacccgtccagtgattcaa
gtgaacgcgtctttgatcctgccggagcagatcgacgatcggatggcgctgtgccgagag
ctcaggcatccagctccctgctttaacgttaccatctgcttcagtgtccaatccagacat
ttcagagggcacatagatcttcagtataatctgacctctgacctcctccataaaccctcc
ttcccacctcggttctttttccacggtaacggatcgtccaatatcacaaatgagcgtgta
cgagcacgacaggggcatctcacttgtgtgacccatgtggcttaccaaaggaaagatgtg
agggacatttttacgccggttcagtttgtggtttcttacagtctcagggagacaaacagc
cgcagagcctcttctacatccttccctccgttaaaacccattctgcagcggagcgcagga
caccgcaacaccatcaccagccagactcggtttgctcgttcctgctccctggtgaactgt
tcgacaaacatgcagctgtcagctcatctagtgctcccacatcagcaggagtactttgcg
ctgggatccgggcagactatcatgttgaaagcctcactgctgaactctggagatgatgcc
ttcctgccacgactgacgctacggttgccgagcaacatccactacattaaagtactgcaa
aatgaggacaatgtggtcagatgtgatgtcacacaggaagtcaacgctacaacagtgggt
gttgactgcagcgtcaccagcttcctccttccagcgcacacccagctgaatatcagcttt
ctgttggatgtcaaccagaacagcacacctggccaaaacctcatccacgtcaacgccagc
agtgataactatgagaggagggaatatctccatgacaactccatcagcctcacccttcct
ctcaaatatggagtcaacgtgaacatccacggttttgtgactccctcctcttttgaaatt
ggagatgaagacttgattcccactaactgctattcagaaagcttcaattacacatacaag
gtgttaaactccggtcccagcagatcagtcgacactgtggttgaaattgcgctgccgaag
atcctcgcaccttaccgtcacaggctgttgcaagtgatcgattggcagtcgtctcaaggt
gtgtgttacatcagtgacacaactgtttcagtcatcaacgactgcgacgtccctcaagct
tccttcatcaaacaactcatcttcttcttttcgcccacctccacccgtagaatgttttgt
ggccgcactgataaggcttgtgagtggttggtgtgtcgcctcggtaatttggaggcgggg
agagaggtcaccatccaactggaagccaacctgaatcctgccgtactacggcaagctccg
ggtcgccatgggatcatgatcctggaaagcacagcagtgatgtcatcacctaaacaagat
aataacaccatcctgatccaggatcatcctgtagcacaggtattggtggaagctgttttt
acccagaaaccctcagcaatggtgaaaatcttcattgttgttgtcagtttagctgtgggg
ttaacaatcctggcagctctcatctggtgtctgtggaaggctggattcttcaagagagaa
ttacatcataaggaggaagagttcaacagagacagctgggacttcgttcccaagcacagc
aaaagagaaagcactacctaa
DBGET
integrated database retrieval system
