Oreochromis niloticus (Nile tilapia): 100693905
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Entry
100693905 CDS
T06104
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100693905
Membrane trafficking [BR:
onl04131
]
Endocytosis
Others
Others
100693905
Endosome - Lysosome transport
100693905
Endosome - Golgi transport
100693905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
100693905
NCBI-ProteinID:
XP_005470218
Ensembl:
ENSONIG00000008935
UniProt:
A0A669ESF0
LinkDB
All DBs
Position
LG6:complement(40120042..40361081)
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AA seq
1237 aa
AA seq
DB search
METWAGFCPGLHLSLGIWVMIAAHTLQNAKAEITCASCPTPVQLHQEKLKLGIRAGPTEE
LATLKNIRVEFKELGVTDQDTEMDGDREAGISAEGAPQFPQDASLDGVSTQEGAPGSSEE
SRRNNDKGEMAEDSALRRARRSGHEFAEFGENGWTGGAGVDAGSPDERGSMLDAHKQGRS
EFRWNRDEGRGNTRQDEPKLTSSTFALTGDSAHNHAVVYWSGQNSSVILILTKLYDFHIG
SVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPSNKRKIMVLTDPEFESSVLISTD
EGASYQKYRLNFYVLSLLFHPTEEDWALAYSHDQKLYSSVDFGRKWQLIHEHVTPNRFYW
SVTGLDREPDLVHMEAHTPDGNVQYVTCRAQMCTEANRNYPFPGYIDISSLVVQDDYIFI
QVPTSGRATYYVSYKREPFIQIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQNDTYNLYL
SDTRGIYFTLAMENVKTTRGIGGNQMLDLYEVAGIKGMLIANKRHDNQVKTYITYNKGRD
WRLLQAPASDLEGNDIHCILPFCSLHLQLQMSENPYLSGTISTKNSAPGIIVATGNIGAE
LSYNNVGMFISSDAGNTWRPIFEEEHNIWFLDKGGALVAVKQPSVPTRHLWVSFDEGRQW
TQHSFSSVPLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSIFSRKCTEEDYQT
WHLHNQGEPCVMGQKQIYMKRRPGNYCMLGKDYSRILSAESCICRAHDFECDYGYERGSD
GNCKPAFWFNPSTVSRSCSQGQNYFNSTGYRKVVLNNCTKGVKELYTPRKQQCPNRPPKG
LLLTTKDGKLTAGLGSNVTFMVHLDEGDSLRTNIQLDFGDGTAVSYSNLSWTEEGIKHIY
KSAGIFRVTAFAENTLGYDTTTLYLHVTCPVEHVQLLAPFVVIRNKEVNITAVVLPSHSR
TVTYFWWLGNNTEPVITLDGSISHTFQSEGMHTITVQVAASNTILQDTKTIAVKEFFKSL
LLSFSPNLDEFNPDIPEWRQDVGRVIKKALLQVAEFPEEQLLVAVFPGVPTAAELFLLPY
KNQSEGKKKSEEALERASDTIVSALNQNLVEFELKPGVRVIVYNTQLTLAPLVDSSPRHS
SSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQGDSTPKITLS
EFSTSKELMEKELDARVKRGVGNACESTREIPNCTSV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgggctggcttctgcccaggcttgcacttatctctgggtatctgggtgatg
atagccgctcataccctacaaaatgccaaggcggagataacttgcgcatcttgcccgacg
ccagttcaacttcaccaggagaaattaaagctggggatacgcgccggcccgacagaggag
cttgccaccctaaaaaacatccgagtggagtttaaggaactcggagttaccgaccaggat
actgaaatggacggcgaccgtgaggctgggatttctgccgagggtgccccccagttcccc
caagatgccagtttggatggagttagtacgcaggaaggtgcacccgggtccagtgaagaa
agtcgccgcaacaatgataagggagagatggctgaagactctgcgctccggagagcaagg
agaagcggtcatgagtttgccgagttcggcgagaacgggtggaccggaggggccggcgtg
gatgcgggctctccggatgagcggggttctatgttagacgcgcacaaacaaggcaggtcc
gaattcagatggaacagggacgaagggagaggaaatacccgccaggacgagcccaagctc
accagcagcactttcgctctgactggagactctgcgcataaccacgcggtggtctactgg
tccggacagaacagcagcgtgatcctgatcctaaccaagctgtatgattttcatatcggc
agcgtcactgagagcacactttggagatccaccgattacggctccacatacgagagaatg
aatgacaaagttggatccaagactgtcctaagttacttatacgtctgtccgtctaacaag
agaaagattatggtgttgacagatccagagtttgagagcagcgtactcatcagcactgat
gagggagccagttaccagaagtaccgcctcaatttctacgtcctgagccttttattccac
cccactgaagaggactgggccttagcttacagtcacgaccagaagctgtacagctcggtc
gactttggaagaaaatggcagctcatccacgaacacgtcacgccaaacagattctactgg
tctgtcacaggcctagacagggagccagatctggtccacatggaagctcacacaccagat
ggaaatgtgcagtatgtcacgtgcagagctcagatgtgcacagaagctaacaggaactac
ccgttccctggttacatcgacatcagctctttggtggttcaagatgactacatattcatt
caggttcctacatcagggcgagccacatattatgtgtcctacaagagagagccatttata
caaatcaagctgcccaaatattccctgcctaaggatttacacatcgtcagcactgacgag
aagcaggtatttgctgcagtgcaggaatggaaccagaatgacacctataacctctacctg
tctgacaccagagggatctatttcaccttggccatggaaaatgtcaagaccaccaggggc
attggagggaaccagatgctagacctatacgaggtggctggaattaaaggcatgttaatc
gccaacaagaggcacgacaaccaggtgaaaacctacattacctacaataaagggcgggac
tggaggctcctgcaggctcctgcatctgacctggaggggaatgacatccactgcatactg
cctttctgctcccttcatctacaactccaaatgtctgagaacccttacttgtcaggaaca
atttccaccaagaattctgcaccgggaatcatagttgccacaggaaatatcggagcagag
ctctcttacaacaatgttggcatgttcatatcatctgatgctggcaatacctggagaccg
atttttgaagaggagcacaatatttggtttctggacaaaggaggggctcttgttgctgtg
aagcagccatctgtgccaactagacatttgtgggtcagctttgacgaaggcaggcagtgg
acccagcacagcttctcctcggtgcccctgtttgtggatggagtgctggtggaggctggg
gctgaaaaccaaatcatgaccttttttggacactttagccaccgttccgaatggcagctc
atcaagatagactacaagtccatcttcagcaggaaatgcacagaggaggactatcaaacc
tggcacctgcacaaccagggcgagccgtgtgtaatgggacaaaagcagatttacatgaag
cgcaggcccggaaactactgcatgctgggaaaggactactcgagaatcctctctgccgag
tcctgtatttgcagggctcatgattttgaatgtgattatggatatgagcgcggcagcgac
gggaactgcaagccagccttctggttcaatccttccaccgtgtccaggagctgcagccag
ggccagaactatttcaacagcacagggtaccgcaaagtggtgctgaacaactgcacgaaa
ggagtgaaggaattgtacacacccagaaagcagcagtgtcccaacagacccccgaaagga
ctcttgctgaccaccaaagatggcaaactcactgccggcctgggcagcaatgtcaccttc
atggtgcatttggatgagggggactctctgcggaccaacatccagctggattttggtgac
ggcacagcagtttcatactccaatctgagctggaccgaggaagggatcaaacacatctac
aagtctgccggaatattccgtgtcacagcgtttgcagagaacacgctcggttacgacacc
acgacactctatctgcacgtcacatgtccagtggagcatgtccaacttcttgctcccttt
gtggtcataagaaacaaggaagtgaacatcacagcggtggtcttacccagccactcacgc
acagtcacttacttctggtggttaggaaacaatacagagcctgtgataactttggatgga
agcatctcgcacacctttcagagtgagggaatgcacaccataactgttcaggtggctgcc
agcaacaccatcttgcaggacactaagactatagcagtcaaagaattcttcaaatctcta
cttttatctttctcccctaatctggacgagttcaaccctgacatacccgagtggaggcag
gatgtggggagagtaattaagaaggctctgctccaagtggccgaattcccagaggagcag
ctcctggtagcggtgttccccggagtgccaacagctgctgagctcttcctgttgccttat
aagaaccaatcagagggcaagaaaaagagtgaggaagcgctagagcgggcttctgacaca
attgtaagtgcactgaaccaaaacctggtggagtttgagctgaagcccggtgtgagggtg
atcgtttacaacacacagttaacactggcgcccttagtggactcgagccccagacacagc
agctcagcgatgcttatgctcctgtcagttgtgtttctcggcctcgcggtgtttctcatc
tacaaattcaagagaaaaataccttggatcaacatatatgctgaggttaaccaggagaaa
gagcaagagatgatcggctcggtcggccaaggcgacagcacgccgaaaattactctgagt
gagttctccacatccaaagaactcatggagaaggagctggatgccagggtcaaaagggga
gtcggaaatgcctgcgagagcacaagggagattccaaactgtactagtgtgtaa
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