Oreochromis niloticus (Nile tilapia): 100693933
Help
Entry
100693933 CDS
T06104
Name
(RefSeq) protein scribble homolog isoform X6
KO
K16175
protein scribble
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100693933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
100693933
NCBI-ProteinID:
XP_003439307
Ensembl:
ENSONIG00000006252
LinkDB
All DBs
Position
LG9:complement(14336116..14414682)
Genome browser
AA seq
1694 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQTVPDEIFRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDISEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPSELK
GLLALTDLLLTQNLLEVVPDSIGSLKQLSILKVDQNRLTHLTDSIGECENLTELVLTENL
LQSLPRSLGKLKKLTNLNVDRNRLGSVPKELGGCASLNVLSLRDNRLGKLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SPSLENLLQNSVDGSWTDSNLNRVSVIQFQEETKAEVDEDDEAAAERRGLQRRATPHPSE
LKEMKKGIEERRNEAYTSRQDEDQSLDPQEKRLSDLSNQSHDSQVSNSTLSATSHEDRQN
VTEASHMENRVDGPSPQDEDDLDEMEVEYIEPTVHFAEEPIIRGGDEEHEEDGEDDERSD
EEDKRPMEKRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDALNSSTQAAEDEEDEE
EEQSDGTPQHRHRVEEAEDSRHQVNSSQVKGVSFDQVNNLLIEPARIEEEEHTLTIVRQT
GGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGVKVGDKLLEVNGVDLHEAEHHT
AVEALRSSGATVSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSSGLAFNLENSPSGP
RQRFSTCLIRNDKGLGFSIAGGKGSTPYRTGDTGIYISRIAEGGAAHKDSTLRVGDRVIS
INGVDMTEARHDQAVALLTGTSPTIALLVERDLNAPGGSPGQSRARAHSPPPPEPSDSPD
QDEEGLGNHLSRMQDEYPIEEVTLVKSGGPLGLSIVGGSDHASHPFGINEPGVFISKVIP
HGLASQCGLRVGDRILEVNSIDLRHATHQEAVRALLANKQEIRMLVRRDPSPPGMQEIMI
QKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSTGAAARDGRLQVGMRILEVNNH
SLLGMTHTEAVRVLRAVGDSLVMLVCDGFDPRKVAAVEASPGIIANPFATGIVRKNSMES
ISSIDRDLSPEEMEIIQKESEMVRETSQWEREEMEKVNIGTGPLKLDYKTLAALPTTSLQ
KVSRAPSSDFTRTESPIREAPYSPTIQPANIHYTSTPTVKDNTSSSTRPGAIQPVGRVRP
SNSPATPDGHSPNPFQHGPSPFNSQTSDLYGTRNNFQPKQPSPESPSFGGKHSPEQRSFR
DRQKYFEIDVKQQTPEKPKPRVSLVGEDDLKKMREEEERKFEQRAREYLMDDDDEDEDEE
DLAKQVAQMKATGKVLLDGVEYKVEPVSTPSQHCSTPPNYSSGPSSVDGKGDSQRNSLED
SFRLEQRPNSMTGLIPAYPGESAAPIRTAKAERRHQERLRMQSPELAVAPDKDLSPAEKR
ALEAEKRAMWRAARMKSLEQDALKAQMVIAKSRDGKKRGTLDQLTESPSPAPTPSPTPME
ELSPRGLTSPGRLSPDTTDTELKFMDDGSSNPGTAASPDVTPLPATSALEEMALYSNKRK
LRQGRRSLETAVPT
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgctgcaaccgccacgtcgagtcggtggacaagcgg
cattgcaacttgcagacggttcctgatgaaatatttcgatacagccgcagtttggaggag
cttctccttgatgccaaccaactcaaagagctaccaaagcctttcttcagactactgaac
ctccggaaactcggcctgagcgacaatgagatccagagactcccgcctgaggtggctaac
ttcatgcaactggtggaactggacatctccaggaacgatatttctgagatcccagagagc
attaagttttgcaaggccttggagattgcagacttcagtggaaaccccctctccagattg
ccggatggtttcactcaactccgagcgctcgctcacctggccctcaatgatgtgtcatta
cagacgttgcccaacgacattggaaatttggccaacctggtgacgttggagctcagggag
aacctgttgaagtctctgcccacgtcgctctctttcctggtgaaactggaacagctggac
ctgggcagcaacgaactggaagttttgccggataccctcggcgctctccccaacctaagg
gagctgtggctggaccgtaaccaattgtcctcattaccaccagagctgggaaaccttcga
aggttggtgtgtctggatgtgtcagagaatcgtctggaggagctcccctcagagctgaaa
ggcctcctggctctcacagacctgctgctcacacagaacctgctggaggtcgtcccggac
agcatagggtctctgaaacagctgtccatcctgaaggtggaccagaacagactgacccat
ctgactgattcaataggcgagtgtgaaaacctcacagaacttgtcctgacggagaacctg
ctacagtcgcttcctcgctcgctgggcaagctgaagaagctgaccaacctgaatgtagac
cgcaaccggctgggcagcgtgcccaaagagctgggcggctgtgccagcctcaacgtcctc
tcactgagagacaatcgcctgggcaaactgcctgctgagcttgcagatgccacggagctg
catgtgctggatgtggctggaaacagattacaaaacttgcctttcgccctgacaaacctc
aacctgaaggccatgtggctcgcagagaaccagtctcagccaatgctcaagttccagacg
gaggacgatgagcgaacaggagagaaagtgttgacctgctatttgctaccccagcagcct
tccccaagcctagagaacctgctgcagaacagtgtagatggtagctggacagacagcaac
ctgaacagagtgtcggtcatccagttccaggaggagaccaaggctgaggtggatgaggat
gatgaggctgctgcagagcgtagaggccttcagcgcagagccacaccacatcccagtgag
ctgaaggagatgaagaaagggattgaagagaggaggaatgaagcctacacatccagacag
gacgaggatcagtccctggacccacaggaaaaaaggctcagtgacctctccaatcagagc
catgactcgcaggtgtctaacagcacgctgtcggccacctcccacgaggacagacaaaat
gtgactgaggcctctcacatggagaaccgtgtggacggcccttcccctcaggatgaggat
gaccttgatgagatggaggtggagtacattgagcccactgtgcactttgcagaagaaccc
atcatccgaggtggggacgaggagcacgaagaggatggcgaggacgacgagaggagtgac
gaggaagacaagaggcccatggagaaacgtctgataagaaaggacacaccacactacaag
aagcacttcaaaatcaccaagctgcccaaacccgaggctgtggccgctctgctacagggc
ttcagtcccgacgccctcaactcttctactcaggctgccgaggacgaggaggatgaggag
gaagagcagagtgatggcactcctcagcaccgccacagagtggaggaggcagaggacagc
cggcatcaggtcaactccagccaagtaaagggggtgtcatttgatcaagtcaataatctg
ctgattgaacctgctcgaattgaggaggaagagcacaccctcaccatcgtgcgacaaaca
ggcggcctgggcatcagcattgctggtggaaaaggatcaacgccttacaaaggagatgac
gagggaatcttcatctccagagtgtctgaagacggtcctgcagccagagctggagttaaa
gtgggagacaaactgctggaggtaaatggagtggacctccacgaagctgagcatcacaca
gcagtggaagctctccgcagctccggtgctacagtctccatgacggtgctgcgggagcgc
atggtggaaccagagaacgccatcaccaccacgccgctgaggcccgaggacgactacttc
ccacgggagaggcggagcagcggccttgccttcaatttggagaacagtccaagtgggccg
aggcagcggttctccacctgcctcatccgtaatgacaaggggctgggattcagcattgca
ggggggaaaggctccacgccgtaccgcacaggggacacgggaatctacatctctcgaatc
gcagagggcggagcggcacacaaagacagcacgctgcgtgtgggcgacagggtgatctct
atcaatggtgtagacatgacagaggccaggcatgaccaggcagtagcgctccttaccggc
acctcccccaccatcgccctcctggtggagcgtgacttgaatgcaccagggggctctcca
ggtcagtcccgggcacgagcccactcccctccacccccagaaccatcagattctccagac
caggacgaggaaggcctcgggaaccatctgagccggatgcaggacgagtatcccatcgag
gaagttaccctggtgaagtctggaggccctctaggcctgagtattgtaggaggcagcgac
catgccagccacccttttggcatcaacgaacctggggtgttcatctcaaaggtgattcct
catgggttggcaagtcaatgtggcctccgtgttggcgaccggatattagaggtgaacagc
attgacctgcgacatgccacacaccaggaagctgtgcgggccttgctggccaacaagcag
gagatccgtatgttggtacggcgggacccttcaccgccaggaatgcaggaaatcatgatc
cagaagcagcctggagagaagcttggtatcagcattcgcggaggggccaagggtcatgct
ggaaatcctttcgaccccacagatgagggcatcttcatctcaaaggtgagttcgaccggc
gcagcagcaagggacggccggctgcaggttggcatgcgaattcttgaggtgaacaaccac
agcctgctggggatgacgcacacggaggcggtgcgagtgctccgtgctgtcggggactct
ctggtcatgctggtttgtgatggctttgaccctcgcaaagtggctgcagtggaggcatct
ccgggtatcattgccaacccatttgcaaccggtattgtacgaaagaacagtatggagagc
atttcttctatagaccgagatctaagcccagaggagatggaaataatacagaaggagtct
gagatggtgagagagacatcacagtgggagcgagaagagatggagaaagtgaacattggc
actggaccgctaaagctcgactacaaaacgctagctgcgctgcccaccacgagtctgcag
aaggtcagcagggcgccttcctctgatttcaccaggacggaaagcccaatcagggaagcc
ccttactctcctactatccaaccggcaaatattcattacacctccactcccactgtcaag
gacaacacctcatcatcaacgcgaccaggtgccatccagccagtggggcgtgttcggccc
agcaactcacccgccacgccagacggccacagccccaacccctttcagcatggcccctcc
cccttcaactcccagacctctgacctttatggcacaaggaacaacttccaaccaaagcaa
ccttctccagagagcccatcatttggtggtaagcacagcccagagcagcgctctttcagg
gacagacagaagtactttgagatcgacgtgaagcagcagacgccagaaaaacccaagcct
cgagtctccctcgtcggggaggatgacctcaagaaaatgagggaggaagaagagaggaag
tttgagcagcgagcgcgggagtacttaatggatgatgacgacgaggatgaggatgaggag
gacctggctaagcaggtggcacagatgaaggccaccggaaaggtgttgctggatggagtg
gagtacaaagtggagccggtgtccaccccatcgcagcactgctccacaccaccaaactac
agctcagggccttcctcagtagatggcaagggagactctcagaggaattcattggaggac
agcttcaggctggagcagaggcccaactcaatgactggtctcatcccagcttaccccggg
gagtcagcagctcccatccgaacagccaaagcagagcgcagacaccaagagagacttcgt
atgcagagccccgagctggccgtggcacctgacaaggacctgtcccctgcagagaaacga
gccctggaagccgagaagagagcaatgtggagggcagcacgaatgaagtctctggagcag
gatgcactgaaggctcagatggtcatcgccaagtctcgggacgggaagaaacgtgggaca
ctagatcaactgacagagtcaccctcgcctgcaccaacgccctctcccactcctatggag
gagctcagtcctcgaggattaacctcgccaggcaggctgtccccggacacaactgacaca
gagttaaagttcatggatgacggctccagtaacccaggaaccgccgcgagccccgacgtc
accccgctgcctgccacctccgccctggaggagatggctctgtacagcaacaagcgcaaa
ctgaggcagggccgccgcagcctggaaaccgctgtgcccacataa
DBGET
integrated database retrieval system
