Oreochromis niloticus (Nile tilapia): 100693948
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Entry
100693948 CDS
T06104
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03013
Nucleocytoplasmic transport
onl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100693948
03015 mRNA surveillance pathway
100693948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100693948
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100693948
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100693948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100693948
NCBI-ProteinID:
XP_003441581
Ensembl:
ENSONIG00000019360
UniProt:
I3KTC0
LinkDB
All DBs
Position
LG5:26276805..26283642
Genome browser
AA seq
483 aa
AA seq
DB search
MATDSWAEAVDKQEAALDSMGKLQLKEKPEENGTTANAKDSAPAKSEGEKAADDDEIEDV
GAQSLLNKLIRNNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMGFNRPS
KIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKYPQCLCVSPTYELAL
QTGKVIEQMGKYYPEVKLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCSKFKFIDPKKI
KVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEESVWNFAQRIVPDPNIIK
LKREEETLDTIKQYYVLCNSKEEKFQALSNIYGAITIAQAMIFCHTRKTAGWLAGELSRE
GHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLPIDKDG
NPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILYRIQEHFNKKIEKLDTDDLDEIEK
IAS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcctgggctgaggcagtggacaagcaagaagctgcgttggactcgatg
ggaaaacttcaattaaaagagaagccagaagaaaatggcacgaccgcaaacgcaaaagac
tccgcacctgcaaagtcagaaggagagaaggcggcagatgatgacgaaattgaggacgta
ggggcacagtctttgttaaacaagctgattcgaaataatctggtcaatacaacaaatcaa
gtggaagttcttcagaaggatccgaactctccgctttactccgtcaagtcttttgaagaa
ttaaggcttaaaccacagctgcttcagggagtgtatggtatgggttttaatcggccatca
aaaatccaggaaactgccttaccgatgatgctggctgaacctccacagaatctgattgct
cagtctcagtcaggaacagggaaaacagctgcctttgttttggctatgctcagccatgtc
gaccccaacaacaaatacccccagtgcttgtgcgtgtcacccacctatgagctggcactt
cagactggcaaagtgattgaacagatgggcaaatattaccctgaagtcaaactagtctac
gccattagaggaaataaattgcagcggggcatgaaactgcaggaacagatagttattggt
acacctggtaccatgttggactggtgcagtaaattcaagtttattgatcccaagaaaatt
aaggtgtttgtgctcgacgaggctgatgttatgatcgccacgcagggtcaccaggaccag
agtatacgcatccagaggatgctgcccaaaaactgccagatgttgctgttctcagccaca
tttgaagagtcggtgtggaactttgctcagcgcattgtgcctgatcccaacataatcaag
ctgaagagagaggaggaaacactggacaccattaaacagtactatgtgttgtgtaacagc
aaagaagaaaaattccaggctctctcgaacatctacggcgccatcaccatcgcccaggcc
atgatcttctgccatacaaggaagacagcaggctggctggcaggggagctgtccagagaa
ggccaccaggtagcgctacttagtggagaaatgcaagtggagcagagggctgcagtcatt
gaacgcttcagagatggaaaggagaaggtcctggtcaccacaaatgtttgtgctcgaggt
attgatgtagagcaggtttctgtggtgatcaacttcgacctgccaattgacaaggatggt
aaccccgacaacgagacatacctgcacagaattggccgcacaggtcgatttgggaagagg
ggattggccattaatatggtggacagcaagatgagcatgaacatcctctacaggatccag
gagcacttcaataaaaaaattgaaaaactggacacggatgatctggatgaaattgagaaa
attgccagctaa
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