KEGG   Oreochromis niloticus (Nile tilapia): 100694053
Entry
100694053         CDS       T06104                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03420  Nucleotide excision repair
onl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100694053 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100694053 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:onl04121]
    100694053 (cul4b)
   03400 DNA repair and recombination proteins [BR:onl03400]
    100694053 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100694053 (cul4b)
Ubiquitin system [BR:onl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     100694053 (cul4b)
DNA repair and recombination proteins [BR:onl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100694053 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100694053 (cul4b)
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100694053 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 100694053
NCBI-ProteinID: XP_003445252
Ensembl: ENSONIG00000040788
LinkDB
Position
LG2:complement(18570039..18587048)
AA seq 868 aa
MFPTGLSSPNPPPPPTQEARPAATDVKTDSGNITSSKKRKINGSEREDTSDTISSSPPKT
LNSSSSSSSSSCSPTPLHIQKKLRFEDSVDFIGLDVKMAEEAAAAAAAASCSNNKSKAMF
LPGGVGHHANGLTKTAGSTTFSNSKPGAAKKLVIKNFREKPKLPENYTQETWQKLKEAVE
AIQNSTSIKYNLEELYQAVENLCFHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLF
LKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSK
TIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQESFEQRFLEETNRLYAAEGQRLM
QEREVPEYLHHVNKRLEEEADRVITYLDQSTQKSLIASVEKQLLGEHLTATLQKGLTNLL
DENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDK
VDLIIDVCFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEK
MLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKL
EGMFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQ
EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLE
EIKVATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQ
IQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLTHNLLMSEVYSQLKFPVKPAD
LKKRIESLIDRDYMERDKENSNQYNYVA
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
cccgcggctactgatgtcaaaaccgacagcggtaacatcacatcttcgaaaaagaggaaa
ataaacggctccgagagggaagacactagtgacacgatctcctcttcgcctccaaagacc
ctgaattcctcctcctcctcctcctcttcctcttgctctcccactccgctgcacattcag
aagaagttgaggtttgaggattcagtggattttattggactcgatgtgaaaatggctgag
gaggctgctgctgctgctgctgctgcttcgtgctccaataacaaaagcaaagccatgttc
ctgcccggcggcgtggggcaccacgcaaacggactgacgaaaactgcaggatccaccacc
ttctccaacagtaaacccggtgctgccaagaaactagtcatcaagaacttcagagaaaaa
cccaaattgcccgagaactacacgcaggagacctggcagaagctgaaggaggcggtggag
gccatacagaacagcacgtcaatcaaatacaatctagaggagctctaccaggctgtggaa
aacctctgcttccataagatctctgccaagttgtacaaacagctgagggccgtgtgtgaa
gaccacatcaaggcacaaattgatcagttcagagaggatgccctggacagcgtgcttttc
ctgaagaaaattgacaagtgctggcaagatcactgcagacaaatgatcatgattaggagt
atattcctgtttttggatcgcacctacgttttacagaattccatgctgccatcaatttgg
gacatgggtctggagctgttccggttctacatcatcagcgatctgaaggttcagagcaaa
accatcgacgggattctgctgctcattgagagggagcgaaacggagaggcgatagaccgc
agtctgttgaggagcctgctgagcatgctctctgaccttcagatttatcaagagtccttt
gagcaacgctttctggaggaaactaatcgactgtacgctgcagagggacagaggctgatg
caggagagagaggtaccagaatatctccatcatgttaacaagcgcttggaggaggaggct
gacagagtaatcacgtacctagaccagagcacacaaaaatcgctcatcgctagtgtggag
aagcagctgcttggtgaacatctcacggcaactctgcaaaaaggtctgaccaacctgctg
gatgagaacagaattcaggatctgtctctcctctatcagctcttcagtcgagtgcgtggt
ggtgttcaggtgctcctgcagcactggatagaatacataaaggcttttggaagcacaatc
gtaatcaatccggaaaaagacaaaaccatggtgcaggagttgctggactttaaagataaa
gtggatctcatcatcgacgtgtgtttcatgaagaatgagaaatttgttaatgccatgaag
gaagcttttgaaacattcatcaacaaacggccaaataaacctgcagagctcatagcaaaa
catgtggattcaaagctgagggcaggaaacaaagaggccacggatgaagagctggagaag
atgctggataagatcatgattatctttagattcatctatggaaaagatgttttcgaggcg
ttttacaaaaaggacctggctaagaggttgctggttggaaaaagtgcctctgttgatgct
gaaaaatcaatgctgtcaaagcttaaacacgaatgtggagcagcgttcaccagcaagttg
gaggggatgttcaaggacatggagctttctaaggacatcatggtgcagttcaaacagtat
atgcagtgccaaaacattcccggcaatatcgagctgacagtgaatatcctcactatgggc
tactggccaacgtacgtccctatggaagtgcacctgccacctgagatggtgcgactgcag
gagatcttcaagactttctacctgggcaaacacagtggcaggaagctgcagtggcagtcg
acgttaggccactgtgtcttaaaagctgaatttaaagagggcaagaaggagctgcaggtg
tcacttttccaaacccttgtcttactgatgtttaatgagggagaagagttcaccctggaa
gagatcaaagtggcaacaggaatagaggacagtgaactacggcggactcttcagtcactt
gcatgtggtaaagcacgtgtcctcaccaaaatcccaaaaagcaaagatgtggaagatggg
gacaagttttcctgcaatgacgacttcaaacacaagctcttcaggatcaaaataaaccag
atccagatgaaagaaacagtggaggagcaagccagcaccacagaaagagtctttcaggat
cgtcagtaccagatcgatgctgccattgtgcggatcatgaagatgaggaagactctgacc
cataatcttttgatgtctgaagtgtacagtcagctgaagtttcccgtcaagcctgctgac
ttgaaaaagagaatagagtctcttattgacagggactacatggagcgtgacaaggagaac
tccaaccagtacaactatgtggcttag

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