Oreochromis niloticus (Nile tilapia): 100694053
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Entry
100694053 CDS
T06104
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03420
Nucleotide excision repair
onl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100694053 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
100694053 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100694053 (cul4b)
03400 DNA repair and recombination proteins [BR:
onl03400
]
100694053 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
100694053 (cul4b)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
100694053 (cul4b)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100694053 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
100694053 (cul4b)
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100694053 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
100694053
NCBI-ProteinID:
XP_003445252
Ensembl:
ENSONIG00000040788
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All DBs
Position
LG2:complement(18570039..18587048)
Genome browser
AA seq
868 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEARPAATDVKTDSGNITSSKKRKINGSEREDTSDTISSSPPKT
LNSSSSSSSSSCSPTPLHIQKKLRFEDSVDFIGLDVKMAEEAAAAAAAASCSNNKSKAMF
LPGGVGHHANGLTKTAGSTTFSNSKPGAAKKLVIKNFREKPKLPENYTQETWQKLKEAVE
AIQNSTSIKYNLEELYQAVENLCFHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLF
LKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSK
TIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQESFEQRFLEETNRLYAAEGQRLM
QEREVPEYLHHVNKRLEEEADRVITYLDQSTQKSLIASVEKQLLGEHLTATLQKGLTNLL
DENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDK
VDLIIDVCFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEK
MLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKL
EGMFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQ
EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLE
EIKVATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQ
IQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLTHNLLMSEVYSQLKFPVKPAD
LKKRIESLIDRDYMERDKENSNQYNYVA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
cccgcggctactgatgtcaaaaccgacagcggtaacatcacatcttcgaaaaagaggaaa
ataaacggctccgagagggaagacactagtgacacgatctcctcttcgcctccaaagacc
ctgaattcctcctcctcctcctcctcttcctcttgctctcccactccgctgcacattcag
aagaagttgaggtttgaggattcagtggattttattggactcgatgtgaaaatggctgag
gaggctgctgctgctgctgctgctgcttcgtgctccaataacaaaagcaaagccatgttc
ctgcccggcggcgtggggcaccacgcaaacggactgacgaaaactgcaggatccaccacc
ttctccaacagtaaacccggtgctgccaagaaactagtcatcaagaacttcagagaaaaa
cccaaattgcccgagaactacacgcaggagacctggcagaagctgaaggaggcggtggag
gccatacagaacagcacgtcaatcaaatacaatctagaggagctctaccaggctgtggaa
aacctctgcttccataagatctctgccaagttgtacaaacagctgagggccgtgtgtgaa
gaccacatcaaggcacaaattgatcagttcagagaggatgccctggacagcgtgcttttc
ctgaagaaaattgacaagtgctggcaagatcactgcagacaaatgatcatgattaggagt
atattcctgtttttggatcgcacctacgttttacagaattccatgctgccatcaatttgg
gacatgggtctggagctgttccggttctacatcatcagcgatctgaaggttcagagcaaa
accatcgacgggattctgctgctcattgagagggagcgaaacggagaggcgatagaccgc
agtctgttgaggagcctgctgagcatgctctctgaccttcagatttatcaagagtccttt
gagcaacgctttctggaggaaactaatcgactgtacgctgcagagggacagaggctgatg
caggagagagaggtaccagaatatctccatcatgttaacaagcgcttggaggaggaggct
gacagagtaatcacgtacctagaccagagcacacaaaaatcgctcatcgctagtgtggag
aagcagctgcttggtgaacatctcacggcaactctgcaaaaaggtctgaccaacctgctg
gatgagaacagaattcaggatctgtctctcctctatcagctcttcagtcgagtgcgtggt
ggtgttcaggtgctcctgcagcactggatagaatacataaaggcttttggaagcacaatc
gtaatcaatccggaaaaagacaaaaccatggtgcaggagttgctggactttaaagataaa
gtggatctcatcatcgacgtgtgtttcatgaagaatgagaaatttgttaatgccatgaag
gaagcttttgaaacattcatcaacaaacggccaaataaacctgcagagctcatagcaaaa
catgtggattcaaagctgagggcaggaaacaaagaggccacggatgaagagctggagaag
atgctggataagatcatgattatctttagattcatctatggaaaagatgttttcgaggcg
ttttacaaaaaggacctggctaagaggttgctggttggaaaaagtgcctctgttgatgct
gaaaaatcaatgctgtcaaagcttaaacacgaatgtggagcagcgttcaccagcaagttg
gaggggatgttcaaggacatggagctttctaaggacatcatggtgcagttcaaacagtat
atgcagtgccaaaacattcccggcaatatcgagctgacagtgaatatcctcactatgggc
tactggccaacgtacgtccctatggaagtgcacctgccacctgagatggtgcgactgcag
gagatcttcaagactttctacctgggcaaacacagtggcaggaagctgcagtggcagtcg
acgttaggccactgtgtcttaaaagctgaatttaaagagggcaagaaggagctgcaggtg
tcacttttccaaacccttgtcttactgatgtttaatgagggagaagagttcaccctggaa
gagatcaaagtggcaacaggaatagaggacagtgaactacggcggactcttcagtcactt
gcatgtggtaaagcacgtgtcctcaccaaaatcccaaaaagcaaagatgtggaagatggg
gacaagttttcctgcaatgacgacttcaaacacaagctcttcaggatcaaaataaaccag
atccagatgaaagaaacagtggaggagcaagccagcaccacagaaagagtctttcaggat
cgtcagtaccagatcgatgctgccattgtgcggatcatgaagatgaggaagactctgacc
cataatcttttgatgtctgaagtgtacagtcagctgaagtttcccgtcaagcctgctgac
ttgaaaaagagaatagagtctcttattgacagggactacatggagcgtgacaaggagaac
tccaaccagtacaactatgtggcttag
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