Oreochromis niloticus (Nile tilapia): 100694062
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Entry
100694062 CDS
T06104
Name
(RefSeq) transcription factor SOX-11
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100694062
Transcription factors [BR:
onl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100694062
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
PPP4R2
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
100694062
NCBI-ProteinID:
XP_005452537
Ensembl:
ENSONIG00000027508
UniProt:
A0A669BTV6
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Position
LG15:25470633..25472708
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AA seq
433 aa
AA seq
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MGLHTEPAEARLTAGYREAAAPERSGLVGASAGSPAPQKPERCKTASGHIKRPMNAFMVW
SKIERRKIMEQSPDMHNAEISKRLGKRWKMLTDTEKVPFIREAERLRLQHMADYPDYKYR
PKKKPRTEGRSAGQYQERNDTPSYKTPAAAKKFPRAGKSVGGAAKAGNLLLQDQEQNSRH
QQKPQERDNPHQQLNSRYQLKHEQTDAQYQQLNPRYQPTARQPDHRFRYVPSTITPSKPV
KRDYTDREEEEDDDNDDSSSSSSSSSEEEEEEEEEEEEELPCYSITKLPPRGSAVRPSTL
QSSGSLYFSFTRQSTPVHPASLSPASPSRSVCTSASSCCGEDLDDLPVEPLDFTSNFLGG
LQSCSDPWNSSSSSASGSLSLSLVDKDLDTSGCTEGGSLGSHFEFPDYCTPELSEMIAGD
WLKADFTDLVFTC
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcacacggagcccgctgaggcgaggcttaccgccgggtaccgtgaagcagct
gccccggagcggagcgggctggtgggggcctctgccggcagccccgcgccgcagaaaccg
gagcggtgtaagaccgcctcgggccacatcaaacggcccatgaacgccttcatggtgtgg
tccaaaatcgagcggaggaagatcatggagcagtctccggacatgcacaacgccgagatc
tccaagcggctcgggaaacgttggaaaatgttaaccgacaccgagaaggttccgttcatc
cgggaggcggagcgcctccggctgcagcacatggccgactaccctgattacaagtaccga
cccaagaagaagccccggactgaggggaggtcggctggtcagtaccaggagcgaaacgac
acaccgtcttacaagacccctgcggcggccaagaagttcccccgagccggtaagtcggtg
ggcggggccgccaaagcgggcaatctcctcctgcaagaccaggagcagaactcccggcac
cagcagaaaccacaggagcgagataacccgcaccagcaactgaactcccggtaccagctc
aaacacgagcagacggacgcccaataccagcaactgaacccccgctaccagcccaccgcc
cggcaaccggatcaccggttccggtacgtgccgagcactattacacccagcaaaccggtt
aaacgggactatacggacagagaggaggaggaggacgacgacaacgacgactcatcatca
tcatcatcatcatcctctgaggaggaggaggaggaggaggaggaggaagaagaagagctg
ccctgctacagtatcaccaagctgccccccaggggttccgctgtgagacctagcacgctc
cagtcctctggaagcctctacttcagcttcacccggcagagcacgccggtccaccctgcc
tccctttccccagcttccccctcccgctccgtctgcacctccgcttcctcctgctgcggg
gaggacctggatgacctccccgtggagccgctggatttcacctccaacttcctgggcggc
ctgcagtcctgctcggacccgtggaactcgtcgtctagctcggcctcggggagcctgagc
ctgtcgctggtggataaagacctggacaccagcggatgcacggaggggggcagcctcggg
tcccacttcgagttcccggactactgcacgccggagctgagcgaaatgattgccggggac
tggctgaaggccgacttcacggacctggtgttcacctgctag
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