Oreochromis niloticus (Nile tilapia): 100694064
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Entry
100694064 CDS
T06104
Symbol
sox21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100694064 (sox21)
Transcription factors [BR:
onl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100694064 (sox21)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100694064
NCBI-ProteinID:
XP_003447333
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Position
LG16:17659481..17661758
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AA seq
248 aa
AA seq
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MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVNGLSTGALSESV
IGNPDKAAAAAAAAAARVFFNPSMSANPYSFFDLGSKMTELSPPSFPYASPLGYPPGGAT
AFTGTGSVGGGTHTHTHSHPSPGNPGYMIPCNCTAWPSAGLQPPLAYILLPGMGKPQLEP
YPAYAAAL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccgatggatcacgttaaacgtccgatgaatgctttcatggtttggtccaga
gcccagcgcagaaaaatggctcaggagaaccctaaaatgcacaactccgagatcagcaag
agactgggagcggagtggaaacttctcaccgagtctgagaaaaggccattcatcgacgaa
gccaaacggctgagagcgatgcacatgaaggaacacccagactataaatacagaccgagg
cggaagcccaagactctgatgaaaaaagataagttttctttccccgtgccctacaatctc
ggggagcacgacgcactcaaagttaacgggctttccactggagcactttccgagtctgtc
attgggaaccccgataaggcggcagcagctgctgcggctgcggcggccagggtattcttc
aacccctccatgtccgcgaacccctactcatttttcgacctgggatccaagatgaccgag
ctttccccaccttcgtttccgtacgcttctcctttgggctacccgccgggaggcgctacg
gctttcaccgggactggcagtgtaggtggcgggacgcacacccacactcactcacatccg
tccccgggaaacccaggctacatgatcccgtgtaactgtacggcctggccctcagcagga
ctccaaccacccttagcatacattctgctccccgggatgggaaaacctcaacttgaaccg
taccctgcatatgctgcggcattatga
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