Oreochromis niloticus (Nile tilapia): 100694178
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Entry
100694178 CDS
T06104
Symbol
pold1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03030
DNA replication
onl03410
Base excision repair
onl03420
Nucleotide excision repair
onl03430
Mismatch repair
onl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100694178 (pold1)
03410 Base excision repair
100694178 (pold1)
03420 Nucleotide excision repair
100694178 (pold1)
03430 Mismatch repair
100694178 (pold1)
03440 Homologous recombination
100694178 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
onl03032
]
100694178 (pold1)
03400 DNA repair and recombination proteins [BR:
onl03400
]
100694178 (pold1)
Enzymes [BR:
onl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100694178 (pold1)
DNA replication proteins [BR:
onl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
100694178 (pold1)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
100694178 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
100694178 (pold1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
100694178
NCBI-ProteinID:
XP_025762690
Ensembl:
ENSONIG00000019377
LinkDB
All DBs
Position
LG4:14246164..14257113
Genome browser
AA seq
1137 aa
AA seq
DB search
MDHKRHNGSRLMGGPSQAKRGKTMGEWEDSPSQFEEELSMFEEADLDAEEMEGQAGHDVI
PVGDLFSADLNPRWRRPTAPSLDPSSDILVFQQIDLDYYLGETVAGMPGQSQGKVPIIRM
FGVTDNGNSVCCHVHGFAPYFYVPAPNGFTSAHLVEFQKELNSAVLKDMRSNKDNISVTV
LAVDITRKESMYGYHGKRIIDFLRITMAMPRLIAPAKRLLEQGFKFSHFPTSNYQSYEAN
IDFEIRFMVDSDVVGCCWIELPKGKYRVREEKSTDNSSSQSPSKASLCQYEVDVGWMDLI
SHPAEGEWQRIAPLRVLSFDIECAGRKGIFPEPDKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVN
YFPYLGRVRGIKSVLKDLNFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEPEKGKYTY
DCVSPLLSTRVTCAVLSCHFLPCSLLCRYYSLPIATLDFSSLYPSIMMAHNLCYTTLLQK
GSVDKLGLAPEDFIKTPTGDLFVKSSLRKGLLPEILENLLSARKRAKAELKKETDPFKKQ
VLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEQTKQLVESKYTLSNG
YQADAKVIYGDTDSVMVKLGVATVKEAMDIGREAAEWVSSHFTPPIKLEFEKVYYPYLLI
NKKRYAGLYFSSSASTHDKMDCKGIETVRRDNCPLVANLINTCLQKILIDRDPQGAVEHA
KEVISDLLCNRIDISQLVITKELTRTAQEYAGKQAHVELAERMRKRDAGSAPNLGDRVPY
VIIKAAKGAAAYMKSEDPIYVLENNIPIDTQYYLEQQLSKPLLRIFEPILGESKAESILL
KGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCKAVLKTDAAVCDFCKKKESELYQKEIFHL
NTLEERFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggatcataaacgacacaacggcagccgtctcatgggtggtccatcccaggccaaacgg
ggtaaaacgatgggtgaatgggaggacagtccttcgcagtttgaagaggagttgtccatg
tttgaagaagcagacttggatgcagaggagatggaggggcaggcaggacacgatgttatt
ccagtaggtgaccttttctcagcagacctaaaccctcgctggcgacgtcctactgccccc
tcactggacccatcatctgatattctggtgttccagcagattgatctggactactatttg
ggggaaacggtagcgggcatgcccggtcagtcgcaaggaaaagtgccaatcattcggatg
tttggtgtaacagacaatggcaacagcgtgtgctgccatgttcacggctttgccccttac
ttctatgttcctgctccaaatgggttcacatctgctcacctggtggaatttcaaaaggag
ctgaactctgctgtccttaaggacatgcgctccaataaggacaatatctcagtcacagtg
ttggctgtggacatcacccgcaaagagagcatgtatggttaccatgggaaacgcattatc
gatttcttgcggataaccatggcgatgcctcgtctcatcgcccctgcaaagagactgctg
gaacagggctttaagttttcccatttccctaccagcaattaccaatcctatgaggccaac
atagactttgaaatcaggtttatggtggacagcgacgtggtgggttgctgttggattgag
ctcccaaaagggaagtacagagtgcgtgaagagaagagcacagataacagcagttctcag
tccccaagcaaggcctccttgtgtcagtatgaggtggatgtgggatggatggatctgata
agtcaccctgcagagggagagtggcagaggattgcaccgctcagagtcctcagctttgac
atagagtgcgcaggaagaaaaggaatcttcccagagccggacaaagatcctgtgattcaa
attgcatctatggtgcagcgtcagggtgagacggagcccttcattcgcacagtcttcacc
ctgcagtcctgcgccagcatcgttggctctcagatactgtgcttcacacaagagacaaag
ttactgcagagctgggctgagtttttgaggactgtggatccggacattattactggctac
aacatccaaaactttgactttccctacttgctcaacagggcagctgctttgaaggtgaat
tattttccgtacttgggccgagtgcgaggcatcaaatcagttttgaaagacttgaatttt
cagagcaagcagatgggccgcagagaaaacaagaccattaacatggagggccgtgttcag
tttgacctgctccaggttcttctcagggattataagttgcgctcatacacactgaacgct
gtgagtttccactttttgcaagagcagaaggaggacgtgcagcactcaatcatcactgat
ttgcagaatggaaatgagcagacgcgccgtcgtttggcagtctactgcctgaaagacgcc
tatctccccctgcgcctgctgcagaagctaatgtgtgtgattaactacatggagatggcc
agagtgaccggcgtgcctctcacgtacctgctctcacgaggccagcagatcaaagtggtc
tctcagctgctgcgacaggccatgaaacaggatctggtaatgcctgttgtaaagacagaa
ggaggcgaggactacactggagctactgtcatcgagccagagaaagggaaatatacctat
gattgtgtcagtccactgttgtccacacgtgttacatgtgcagtcttgtcatgtcatttt
ctaccctgctctcttctgtgtagatattacagccttcccattgccacattggatttctcc
tccttgtatccgtccatcatgatggctcacaatctgtgctacaccactctgctgcagaag
ggctcagtggataaactgggcctggctcccgaggacttcattaagactccaacaggcgat
ctctttgtgaagagttctctaagaaagggacttctcccagagatcctggaaaacctgctg
tctgcccgaaagagggccaaagcggagctaaaaaaggaaaccgaccccttcaagaagcag
gtgctggacggccgacagctggccctcaaaatcagcgcgaactctgtgtatggcttcacg
ggggcccaagtgggcaaactgccctgcctagagatctcacagagtgtcaccggttttgga
agacagatgattgagcaaaccaagcagctggtggagtctaagtacacactttccaatggc
taccaggctgacgccaaggtaatttatggagacacggactctgtcatggtaaagcttgga
gttgcaacagtaaaagaggccatggatatcgggagagaggcggccgagtgggtatcatcc
cattttacaccacccatcaaactggagtttgagaaggtgtactacccgtatctgctgatc
aataagaagcgctacgcaggcctgtatttctcctccagtgcaagcacgcatgacaaaatg
gactgcaaaggaattgagaccgtccgcagagacaactgccctctggtggctaacctcatc
aacacctgtctgcagaaaatcctcattgacagggatccccagggggccgtggaacacgcc
aaagaggtgatctcagacctgctctgcaatcgcatcgacatcagccaactggtcatcacc
aaggagctaacgcgcactgcccaggagtacgctggcaagcaggcgcatgtggagctagca
gagaggatgaggaaaagagatgcaggtagcgcccccaacctgggagaccgagtcccgtat
gtcatcatcaaggctgcgaagggagcagcggcatacatgaagtcagaggaccccatctac
gtgctggagaacaacattcccattgacacacaatactacctggagcagcagctgtccaaa
cctctgctgagaatatttgagcccatcctgggagagagcaaagcagagagcatcctgctc
aagggcgaccacacacgctgtaaaactgtgttaacctcaaaggttggaggcctcatggcg
tttgctcagaagagaagcacctgtattggctgcaaagctgtgctcaagacagacgcggcc
gtgtgtgatttctgcaagaagaaagagtctgagctgtaccaaaaagagatctttcacctg
aatacactggaggagcgtttctctcgcctgtggactcagtgtcaacgctgtcaaggctca
ctccatgaagatgtgctgtgcaccagccgggattgtccgatcttctacatgaggaaaaag
gttcagaaagacctggacgaccagagcaagctggtgtctcgtttcggatggtga
DBGET
integrated database retrieval system
