Oreochromis niloticus (Nile tilapia): 100694252
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Entry
100694252 CDS
T06104
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl02010
ABC transporters
onl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100694252
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100694252
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
100694252
Transporters [BR:
onl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100694252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
SMC_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
100694252
NCBI-ProteinID:
XP_003449992
Ensembl:
ENSONIG00000016170
UniProt:
I3KGX1
LinkDB
All DBs
Position
LG6:29399355..29434670
Genome browser
AA seq
2269 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRIHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGVVGNFNDSIISRLFTDAKKILLYTQNDK
SYEGYKGLLRALRKLQKNTARFKLKDFLRDDETLSHFLHHNASLPRHALKHIVEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADRNVSRMTQDIICKSSSDWLNKAQSHFLSNLDF
LKPVRKDVRSDPKDVQDVSAATDNLLESLGALAVELASMKSWKDMRKEILYLTANATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDSEPMSTYDNSSTPYC
NNLMKNLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEVKPKIWNFMENSEEMDLVRTLLQNNASAMFLNTQLSGTELRVSDIAAFLSKTSVNKK
QGSVYTWRDVFNETDHAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLDNQRFWAGIV
FPDIAHNNSTDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSYL
QDVIEQGIIRAVTGTKQKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDSG
VVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
IVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLYG
IMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKENKNISTPLSKKGNADAVCIEEEPSHI
EPGVYIENLVKIYSHGNKLAVDGLSLRFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRSELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQI
VNDVGLPHKRKSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDYD
LTLQSCRNSASTVSYSKKTEKEDSVSESSSDAGLGSEPESETTTIDVSLISNVIFKHVPE
ARLVEDLGHELAYVLPYQAAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVAE
DSGVDSVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLSGTD
GKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFG
KYPSLALDPGMYGEQFTFISNDMPEDPHTNNLLGALTAEPGFGTRCMEGEPIPDIPCTAV
QDEWSVPQVSQSVKDMFDKGNWTMQNPSPLCECSCEGRKRMLPECPSGAGGLPPPQMKIS
ETDTLQNLTGRNVSDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSQFLAHTDETD
RAIAQLRRRFHLERGAAADRFFHSLSSFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNA
ILRVSLPAGKDPTKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASF
VVFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVSS
TNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFG
SNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKN
LFAMAIEGVVFFCITVLIQYRFCFKARSSTSHLKPIGEEDEDVARERQRILSGGGQTDIL
ELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYL
AGKSVTTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVADWGIRKL
GLMKYVDKAAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIK
EGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDL
RPVMDFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSKNKEALSIEDYSVSQTT
LDQVFVNFAKDQSDEDHLKDVHLSKRDAVVVDISQLNSFLTDKTRESCV
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcagctgggtttactgctttggaagaacttcacctaccgacggaga
cagactatccagttgctgattgagatcatctggcccctgttcatctttttcatcctgata
tcagtccgaatacattatccgccctatgagcaacatgaatgtcacttcccaaacaaggct
atgccttcagcaggtactctgccctgggtacaaggtatcatctgtaatgccaacaacccc
tgcttccgtaatcccacgcctggagagagtcctggggtggtgggaaattttaatgattct
ataatctcccgtctgttcactgatgccaagaagatcctgttgtacactcagaatgataag
agctatgaaggctacaagggactgctgagagctctcaggaagctacagaaaaacactgct
cgtttcaagctgaaagactttttgcgtgatgatgaaaccctttctcacttcctgcatcac
aatgcgtcacttcctcgtcatgccctgaagcatatagtggaggctgatgtcaatcttgag
aaggtcctcacaaaaggtttcggcttccatctcagagatctctgcaacaccacaccactg
gaggagtttgtccacattgctgaccgcaacgtgtcccgcatgactcaagacatcatctgt
aagagttccagtgactggctgaacaaggcccagagtcacttcctgtctaacttggacttc
ctaaaacctgttcggaaggatgtgaggtctgatccaaaagacgtacaggacgtctcagct
gcaaccgacaatcttctggaaagcctgggagcactggccgttgagcttgccagcatgaag
agttggaaggatatgcgaaaggagatcctgtatcttaccgcaaatgctacagggtctcca
aatcagatgtaccaggccgtgtcacgtatcgtctgtggacatcctgagggagggggcctc
aaaatcaagtctctcaactggtatgaagacaacaactacaaggccctttttggaaaccac
ggcaacgatagtgacagtgaacccatgtccacttatgataactcctccactccttattgt
aacaatttgatgaagaacctggagtccagtcccatttccagaatgatctggcgagctctg
aagccccttctcatggggaagatcctttatacaccagacactccagcaacacagaggatc
atccatgaggttaataagaccttccaggagctgggtgtgctgagggaccttggagggatg
tgggaggaggtgaagcccaagatttggaacttcatggagaatagcgaggaaatggacttg
gtcaggaccctgctccagaataatgccagcgctatgttccttaacacccagcttagtggg
actgagttgcgcgtgtcagatatagcagcattcctctctaagacctcagttaacaaaaaa
caaggctcggtctacacctggagagatgtcttcaatgaaaccgaccacgccatacagacc
atttctcgtttcatggagtgtgtgaacctggacaaactggagccagtagctaatgaggag
cgattggtcaacaagtccatgggtcttcttgataaccagaggttttgggctggaatcgtg
tttcctgacattgcccacaacaacagcactgacctgccacccaatgtcaattacaaaatc
cgtatggacatcgataatgtggaaagaacaaacaagattaaagacggatattgggaccct
ggtcccagggcagacccctttgaggacctgcggtatgtctggggtgggttttcctacctg
caggatgtaattgagcaaggaattatcagagctgtcaccggcaccaagcagaagacagga
atctacattcagcagatgccctacccctgctacgttgatgatattttcctgcgtgtgatg
agtcggtcaatgcctctcttcatgaccttggcatggatgtactcagtggctatcatcatc
aagggagtggtatacgagaaagaggcacgcctcaaagagaccatgagaatcatgggactg
aacaacggcaccctttggctcagctggttcatcagcagtttaatccccctgctgatcagc
gctggcttgttggtgatgttattgaagatgggtaacctgctgccttacagtgactccggc
gttgtgtttctcttcctgggatcgtttggcgtagttaccatcatgcagtgctttctcatc
agcacgctgttttctcgtgccaacttggcagccgcctgcggtggcattatatacttcact
ctctacctgccctacgtgctttgtgttgcctggcaggactacgtgggctttggagcaaaa
attgttgtgagtctcctttctcctgtggctttcggttttggatgtgagtactttgccctc
tttgaagaacaaggagtgggaatacagtggtcaaacctacttgccagccctctagaggaa
gacagctacaacctgaccacttccatctgtctcatgctgtttgacgctgtgctgtatgga
ataatgacctggtacattgaagctgtgttccctggtcagtatgggatccccaggccctgg
tattttcccttcactaggacatattggtgtggagaaaaagagaacaagaacatttccacc
cctctgtcaaagaagggtaacgctgatgctgtctgcattgaggaagagccaagccacata
gagccaggtgtttacattgagaatcttgtgaagatctacagccatggaaacaaactggcc
gtggatggcctgtccctgagattctatgagggccagatcacctccttcctcggacacaat
ggagctggcaaaaccacaactatgtcaatcctgacagggttgtttccacccacatctggc
acagcttacattctcggcaaagacattcgctctgaactcagcactatccggcagaatctg
ggtgtatgccctcaacacaacgtactttttagcatgttgacagtcgaggaacacatctgg
ttctacgcccgcctgaagggtcttccagaggagaaggtgaaggcggaaatggaacaaatt
gtgaatgatgttggactgcctcacaaacgaaagtctcgcacaagcaccctgtccggtgga
atgcagaggaagctgtcagtggccttggcttttgttggtggttcaaaggttgtgattctg
gatgaacccacagctggtgttgatccctacgcacgcaggggcatctgggacctcttgctc
aaatacagacaaggccgcaccatcatcctgtccactcatcacatggacgaggctgatatc
ctgggtgaccgcattgccattatttcgcacgggaagctgtgttgcgtaggctcctctctt
ttcctgaagacccacttggggacaggctactacctgaccctggtcaagagagactatgac
ttaacgctacagtcatgcaggaattctgccagcacagtctcctatagcaagaaaacagaa
aaggaggacagtgtatcagaaagcagttcagatgctggtcttggcagtgaaccagaaagt
gaaaccactactattgatgtctccctcatttccaatgtgattttcaagcatgtccctgag
gctcgcctggtggaggatctcggccatgaactcgcctatgtcttgccctaccaggctgct
aaagatggcgcctttgtggagctctttcatgagcttgatgaccgactgactgacttggga
atctcaagctatggaatatctgataccaccctagaagaaattttcttgaaagtggctgag
gacagtggagtggattcagttgagctttcagatggagtcgtacccaccagaactcgtcgt
cgtcatgcattcggagatcaccagagctgcctgaagcccttcactgaggacgactttgac
ttcaatgactctgaaggtgacccagaatcccgtgagaccgactggcttagtggaacagat
ggcaaggggtcataccaagtgaaaggctggagtctgaagagacagcagtttgtagcacta
ctgtggaaacgattcctctatgctcgacgctctaggaagggcttctttgcccagattgtg
cttccggcagtgtttgtgtgtattgctttggtgttcagcctgatcgttcctccatttgga
aagtaccccagcctggctctggatcctggcatgtatggagaacagtttaccttcatcagt
aatgacatgcctgaagaccctcataccaacaatctgcttggagctctgacagcagaaccc
ggctttggaacacgctgcatggaaggagagccgataccggacattccctgcactgcagtt
caagatgagtggtcggtccctcaagtctctcaaagtgtgaaggacatgtttgacaaagga
aattggaccatgcagaatccgtctccattgtgtgagtgcagctgcgaagggcgcaagagg
atgttgcccgagtgtccatctggagctggggggcttccaccaccacagatgaagatcagt
gagacagacactctgcagaatttgactggcagaaacgtttcagactatctggttaagacc
tatgctcagatcattggcaagagcctgaagaacaagatctgggtcaacgagttcagatat
ggcggattctcattaggtgcaaggagttcacagtttctggcccatacagatgaaactgat
cgtgcaattgctcagctgaggagacgtttccatcttgaaagaggagctgcagcagatcgt
ttctttcacagtctttccagtttcatccaaggattggacaccaagaataacgtcaagatt
tggtttaacaacaaaggctggcacagcattggttccttcctcaatgtgatgaacaacgcc
attctacgggtgagtctgccagctggaaaagaccccacaaagtttggcatcactgcctac
aatcatccactcaacctcaccaaggagcagctctcacaagtcgcattgatgacaacatcg
gtggacgtgctcgtgtccatttgcgtcatcttcgccatgtcctttgtgcccgccagtttt
gtggtctttctcatccaagagagagtgaacaaggccaaacacatgcagttcattagtgga
gtacaaccctttctctactggctggctaactttgtctgggatatgtgtaactacatcgtt
cctgccacactggtgatcatcatctttgtatgtttccaacaagacgcctacgtctcatcc
accaatctgcctgtgctggctctgctgctgctactctatggatggtcaatcacccctctg
atgtacccagcttcatttttctttaaaatacccagcacagcctacgtggttcttactagc
gtcaacatactgataggaatcaacggcagcgtgtccacatttgttctcgagctgtttgga
agcaatgagatcggtggcatcaatgatatcctgaagaatgtgttcctcatcttccctcac
ttctgcttgggaagaggacttattgacatggtgaagaatcaagcaatggctgatgctctg
gagagattcggtgaaaaccggttccgctctcctctggcctgggacatggttggaaagaac
ttgtttgcaatggccattgagggtgttgtcttcttctgtataaccgtcctcattcagtat
cgcttctgcttcaaggccaggtcatccactagtcatctgaagcccatcggagaggaagac
gaggatgtggcgagagagcgacagcggatcctcagcggtggaggacagacagacatcctg
gagctcagacagctcaccaagatttacaagcgcaaacagaagccagcagtggaccggctg
tgtgttggcatccctcctggagagtgttttggtttgctgggggtgaatggagcaggaaaa
accagcaccttcaaaatgcttacaggagattctgtggtaacaagtggcgaggcctacctg
gctggcaagagtgtaaccacagagatagatgaagtccatcagaacatgggctactgtcct
cagtttgatgctatcaatgacctactgactggcagagagcatctcgagttttatgccatc
ctgagaggagtgcccgagaaggaagtctgtgaggtggcagactggggcattcgtaaactg
ggtttgatgaagtatgtggacaaggcagctggcagctacagtggaggaaacatgaggaaa
ctgtctactgctatagctctaataggaggaccacctgttgtgtttctggatgaaccaact
acaggcatggaccccaaggcacgccgtgctctctggaacgccatcctgagcatcatcaaa
gaggggcgatctgtagtcctgacctctcacagtatggaggagtgtgaggctctttgtacc
aggatggccatcatggtcaacggcaggttccgctgtctgggcagcgtgcagcacctcaaa
aacagatttggtgatggctacacaatcatcctacgggtggcgggaccagacccagacctt
aggccagtaatggacttcatagaaagggagctaccagggagcacgttgaaggagaaacac
cgcaacatgctccagtaccagcttccctcatccctcacctctctcgcccgaatcttctcc
ctgctctcaaagaacaaagaggctctcagcatagaggactactctgtttctcagaccact
ttagaccaagtgtttgtaaattttgccaaggaccaaagtgacgaggaccacttgaaagac
gtccatctgagcaagcgggacgctgttgtagtggacatttcccagctgaactcttttctc
acagacaagaccagggagagctgtgtctga
DBGET
integrated database retrieval system
