Oreochromis niloticus (Nile tilapia): 100694408
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Entry
100694408 CDS
T06104
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100694408
Ion channels [BR:
onl04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
100694408
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_5
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
100694408
NCBI-ProteinID:
XP_025759067
LinkDB
All DBs
Position
LG23:complement(31733892..31749762)
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AA seq
1651 aa
AA seq
DB search
MIPVMEFRQFSEQQTAFRVLKPWWDVFTDYLSVMMLMIGVFGCTLQVMHDKIICLPQRIS
LPPDNSSEVELKSPLHLQSNTSTVPTGLKTNLDLQQYSFINQMCYENALHWYAKYFPYLV
LMHTLVFMVCSNFWFKFPGSSSKIEHFISMLGKCFDSPWTTRALSEVSGENPEEQDHKKD
TASRSNIPMSPGEGSLEKTQSLRSIAEKIVVDQPSASVLDKKEGEQAKALFEKVKKFRLH
VEEGDILYLMYVCQTVFKVFKFLLIIAYNSALVNNVNNTVHCNGIEEIQNMTGYKVFECN
HTMAHLFSKLSCCYLFLVSVYGLTSLYTSYWLFYRSLKEYSFEYVRQETGISDIPDVKND
FAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLSLNHEWTAEKLRQRLQTNSNNKLELQ
LFMFPGLPDTVFELTELQSLKLELINNVTIPASISQLQDLQELSLYQCSLKLHTTATSFL
KENLKVLRVKFDDNRELPNWMYGLRNLEELYLTGSLSSDASKNIVLESLREMKCLKTLSL
KSSLTKIPQSIVDVSSHLQQLYLHNDGTKLVMLNNLKKMTNLIELELVRCDLERIPHAVF
SLTSLQKLDLKENNLRSIEEIVSFQHLRKLTCLKLWYNSIMYIPEHIKKLGSLEHLYFSH
NKIEILPSHLFLCNKLRYLDLSNNDIRFIPPEIGVLQSLQYLSVSCNKIENLPDELFFCK
KLKTLKLGKNSLSKLSPKISYLAHLTYLELKGNHFEFLPQELAFCRALKRSGLIVEETLF
ETLPSDVRDQMKAELFSVAGMFTLTEVASLNDIQPTYRILKPWWDVFMDYLGIVMLMLAI
FSGTMQLTKDQVVCLPILEQTPEGSGGFLEPEAPEPTNGFWNKESAIGEQAAPLMAKRPP
DSVTPTIHFTQPATIGQPYPTGVRTKLDFQQYVFVNQMCYHVALPWYSKYFPYLALIHTI
VLMVSSNFWFKYPKTSSKVEHFVSILGKCFESPWTTKALSETACEDSSENKQRLAGASSL
LKHLSTSSEEGSPNQSAPVLTKSGVTFSAEKLVSEIPSMTILDKKDGEQAKALFEKVRKF
RAHVEDSDLIYRLYAIQTVIKTVKFILILCYTMTFVAYIDFDHVCEPEIKHLTGYTKFHC
THNMAFMLNKLLVSYIALICVYGVICIYTLFWLFRRPLKEYSFEKVREESSFSDIPDVKN
DFAFLLHMVDQYDQLYSKRFGVFLSEVSENKLREISLNHEWTFDKLRQHVTRNPQDKSEL
HLFMLSGVPDAVFDLTDLEILKLELIPEAKITAKISQMINLQELHFYHCPAKVEQTAFIF
LRDHLRCLHVKFTDVAEIPSWVYMLKNLRELYLVGNLNSENNKLIGLESLRDLRHLKILH
LKSNLTKIPTNITDLSPHLLKLVIHNDGTKLLVLNSLKKMMNLAELELHNCELERIPHAI
FSLNNLQELDLKSNNIRTIEEVISFQHLKRLTCLKLWHNKIITIPLSISHVKNLESLYLS
HNKLESLPSPLFTLLKLRHLDVSHNSIVVIPPEVGFLQNLLYFAIAGNKVEALPKQLFKC
TKLRTLCLGHNCISSVPEKIGQLSQLTHLELKGNCLDRLPAQLGQCSLLRRSCLIVEDHL
FDSLPIEVKESINQETSVSFANGCKCLSDGR
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtgatggaattccggcagttttctgaacaacagacagcgttcagagtcctg
aagccgtggtgggatgtgttcactgactatctgtctgtaatgatgctcatgattggcgtc
tttggatgtactcttcaggtaatgcacgataaaattatatgccttcctcagagaatatca
ttgcctccagacaacagcagtgaagtagagttgaagtcaccattacatctgcagtccaac
acctcaactgtaccaacaggcctgaagaccaatctagatcttcaacagtacagtttcatc
aaccaaatgtgctatgagaatgccttgcattggtatgccaaatactttccctatttggtg
ctcatgcacactttagttttcatggtgtgtagcaacttctggttcaagttccctggctca
agctctaaaatagagcattttatctctatgcttggcaagtgctttgactctccctggacc
acacgagctttgtcggaagtgtctggagaaaatccagaagaacaggatcataaaaaggac
accgcttctaggtctaacattcctatgtctccgggggaaggcagcctcgagaagacgcag
tccctgcgttctattgccgaaaagattgttgttgaccagccatcagcaagtgttcttgat
aaaaaagagggtgaacaagctaaagctctgtttgaaaaggtgaagaagttccgtttgcat
gttgaggaaggagatatcctttacctcatgtatgtttgccagactgtattcaaggtgttt
aaattccttttgatcattgcttataacagcgctctagtaaataacgtaaataatacagta
cattgcaacggtatcgaggagatccagaacatgacaggctacaaagtcttcgaatgcaat
cacaccatggctcatctcttttctaagttgtcttgctgttacctgttcttggtgtctgtc
tatggattaacaagcctctacacctcctactggctgttttaccgctcactgaaagaatac
tcattcgagtatgtgcgacaggaaacggggatcagtgacatcccagatgtcaagaatgac
tttgctttcatgcttcacatgattgaccagtatgacccgctgtattccaaacgatttgca
gtttttctctccgaagtcagtgagaacaaactgaaacagctcagtctcaaccatgagtgg
actgcagagaaactgcgtcagagactccagaccaactccaacaacaaacttgaactacag
ctgttcatgttccctggtttacccgacactgtctttgaactgacagagctgcagtcactc
aagctggaactcatcaacaatgtcaccatccctgcctcaatctcacagctgcaagatctt
caggagctgtctctttaccagtgctctttaaagttgcacacaactgctacatctttcctc
aaagagaacctgaaagtgcttcgtgtgaagttcgacgataacagggaacttccaaactgg
atgtatggcctgcgaaatttagaggagctctatcttactgggtccctcagctctgatgcc
tccaagaatatagttcttgagtctctgcgggaaatgaagtgtctcaaaacactctccctt
aagagcagcttaaccaagataccccagtcgattgtggatgtttccagccatctgcagcaa
ctctatttacacaacgatggcactaagctagtaatgctcaacaacctgaaaaagatgacc
aatctaatagagctggagctagtgcgctgtgatctggagcgcattccgcatgcagtcttt
agcctaacaagtctgcaaaagcttgacctgaaagagaataaccttcgttcgatagaggag
attgtcagcttccagcatctgcggaagctcacttgcctcaaactctggtacaacagcatc
atgtatatcccagagcatatcaaaaaactcggcagcttagagcacctctacttcagccac
aacaagattgagatattgccttcacacctgttcttgtgcaacaagctgcgctacctggac
ctatctaacaacgacatccgtttcattcctccagaaatcggagttcttcagagtctgcag
tacctttctgtctcttgtaacaaaattgaaaatctaccagatgaactgttcttttgcaaa
aagctgaaaacgctaaagcttggcaagaactcgctgtccaaactctcgccaaaaatatcc
tatctagctcatctgacctacctggagctcaaaggcaaccactttgagttcctgccacag
gagcttgctttctgtcgcgctttgaagcgcagtggccttatagtggaggagacactgttt
gaaactctgccttcagatgtcagggatcaaatgaaggctgagttgttttctgttgcagga
atgttcacgctcacagaagtagcctccctgaatgacatccagccaacttacagaatactg
aagccatggtgggatgtcttcatggattatcttggtattgtcatgttgatgttggccata
ttttctggaaccatgcagttaactaaggaccaagtggtttgtcttcccattctggagcaa
actccagaggggtccgggggtttcttggaacctgaagcgccagagccaaccaatggcttt
tggaacaaagagagtgccattggggagcaagctgctcctctcatggctaaaaggcctccc
gacagcgtcacgcctaccattcacttcacacaaccagctaccatcggacagccctatcct
acaggcgtcaggaccaagctggattttcagcagtatgtttttgtcaaccagatgtgctac
catgtcgccctaccttggtattcaaaatatttcccataccttgctctaattcacactatt
gtgttgatggtcagtagcaacttctggttcaaataccccaaaacaagctcaaaagtagaa
cattttgtttccatactgggaaagtgttttgaatcaccttggactaccaaagctctgtct
gagactgcgtgcgaggattcgtcagagaacaagcagaggctggccggggcctcctctctc
ctgaaacatctgtccacaagtagcgaggaggggagtccgaaccagtccgctccggtgctg
actaaatctggggttaccttttctgctgaaaagcttgtgagtgaaattccctccatgact
atactggacaagaaagatggcgagcaagcgaaggccctgtttgagaaagttcggaaattc
cgtgctcatgttgaagacagtgatttgatttatagactctatgccatacagacagttatc
aaaactgtgaaatttattttgatcctgtgctacacaatgacgtttgttgcttatatagat
tttgaccatgtgtgtgagcctgaaataaagcatttgactggatataccaagttccattgt
acacataacatggcatttatgttaaacaagctccttgttagttatattgctctcatatgc
gtttatggcgtgatctgcatatacacactgttctggctttttcggcgaccactcaaggag
tattcctttgaaaaagtcagagaggagagcagcttcagtgacattcctgacgttaaaaat
gactttgcattcctcctccacatggttgatcaatacgaccagctgtattcaaagcgtttt
ggggtttttctctctgaggtgagtgagaataaacttcgggaaatcagcctgaaccatgaa
tggacatttgacaagttgcgccagcatgtaacgcgcaatcctcaagataagtcggaactt
catcttttcatgctgtctggagttcctgatgctgtgtttgatctcactgacttggaaatt
ctgaaactagaattaatcccagaagccaaaataacagcgaagatctcacaaatgataaac
ctccaggagctgcacttctaccactgtcctgccaaagttgagcagaccgctttcattttc
cttcgtgatcacctccgatgccttcatgtcaaattcacagatgttgcagagattcctagc
tgggtatacatgttgaaaaatttaagggaactctacttggtgggtaacctgaactctgaa
aacaacaaactgattggacttgagtccctacgagatctcaggcacctgaagattctgcac
cttaaaagcaacctcacaaagatccctacaaacataaccgacctgtcaccacatctgtta
aagctggttattcataatgatggtacaaagctcttagtgctgaacagtttgaagaaaatg
atgaaccttgcagaactggaactgcataactgtgaactggaacgaatccctcatgccatc
ttcagtttgaacaaccttcaggaacttgatctcaaatccaacaacattcgcaccattgaa
gaggtcatcagctttcagcacctgaaaagactaacgtgtctcaaactttggcacaataag
atcatcactattccactgtcaatcagccatgttaaaaacctggagtcgctctatctctca
cacaacaagctggaatctctaccttcaccattattcacacttctcaagttgcggcacctc
gatgttagccataattctatagtggtaatcccaccagaggtgggctttctccagaacctc
ctatattttgccattgcagggaacaaagtcgaggcactccccaagcaactgttcaaatgc
accaaactaaggactttatgccttggccacaactgtatctcctctgttccagagaaaatt
ggccaactttctcagctcacacatctggaattgaagggaaactgtctggatcgtctccca
gctcagctcggtcagtgttccctccttcgcaggagctgcctgattgtggaggatcatctc
tttgactcacttccaattgaagtaaaagagagcatcaatcaggaaaccagtgtttctttt
gctaatggatgtaaatgtttaagtgatggacggtag
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integrated database retrieval system
