Oreochromis niloticus (Nile tilapia): 100694434
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Entry
100694434 CDS
T06104
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100694434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100694434
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
100694434
REST complex
100694434
Heterochromatin formation proteins
Other heterochromatin formation proteins
100694434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
100694434
NCBI-ProteinID:
XP_013130198
Ensembl:
ENSONIG00000005791
UniProt:
A0A669DZJ2
LinkDB
All DBs
Position
LG1:10668296..10686535
Genome browser
AA seq
1293 aa
AA seq
DB search
MKRRVEDQEPILAPQQQLLRRPQIQGITENFQHRALAPAPTVIEAPADKMQPSTSIQYSL
PQGYQVSAMPQSTSGHGHGHNSTAPHVGPHSHALAVPSQGPAVVQGHVHPPAPMPSTTGQ
QQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGH
PDLIMGFNTFLPPGYKIEVQTNDLVNVTTPNQIHYITPHGVSVQNIPASGAPSQPAPSHH
QHQSLPQTGSLTTTTQPLIPAQPAPNKTSKPIQSPAHTPTSQPNPSIPSYASPRSPSVQS
HTPVSSTPSSGPPIQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNA
KEAGGNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSALLSKTTPDRAESVRN
DHGGTVKRHFLNNKQRLSQNGLPIRRPSGVGTTPPVKKKPKITGKDHGMSDVSKHSTSTE
TMFFEKVKKALRSSEAYDNFLRCLHIFNQEVISRTELVQLVIPFLGKFPELFTWFKNFLG
YRESSHGESSHAESLPKERATEGIAMEIDYSSCKKLGSSYRALPKSFQQPKCTGRTPLCR
EVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDIVLETNLATIRALETVQR
RLSRMSAEEQLRFKLDNTMGGSSEVIHRKAIQRIYGDKAQDIIEGLKKNPAVSVPIVLKR
LKMKDEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIEMLYD
ERQERASEESATPPPNGPHMTLTYDDSQILEDAASLIIHHVKRQVGIQKEDKCKIKQIIH
HFIPDLLFAQRGELSDVEEEEEEEEDTEMDQDGSKKHNGLPGRSPTKSKLLFSNTAAQKL
RGTDDAYNLFYVNNYWYVFLRLHHILCSRLLRIYGQAEKQIEEDSREREWEREVLGFKRE
KNENPAIQLKMKEPMDVDVEDYYSVFLEMVRNLLDGNMEPAQYEDSLREMFTVHAYVAFT
MDKLIQSIVRQLQHLVTDDVSVRVTDLYLSESSNKATGGTLPTQASRATAEAGYQRKAEQ
LMPDENCFKLMFVKNQASVSLAVELLDTEEENSDEPAEAEKWSDYVGRYLNSDSSSPELR
EHLAQKPVFLPRNLRRIRKCQRGWEQLQQERMTKGSSDKSQDGSSELKMECMFKLNSYKM
VYVCKSEDYMYRHTALTRAHQSHQLVNTRLHRRFHAWLDTWAKEHVTSDMAADSHKWFMG
DGQEGLLACTTTCSPEVLHYLNINKYRVKYKTP
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgtgtggaggaccaggaaccaatacttgcgcctcagcagcagctattacgc
cggcctcaaatacaaggaattacagaaaacttccagcaccgggcccttgccccggcccct
actgtaatagaggcacctgcagacaagatgcagccatcgaccagcatccagtactctctt
ccccagggctaccaggtttctgcaatgcctcagagcacaagtggacatggccatggacac
aacagtacagcaccacacgttggtcctcactcacacgctctagcagtgccgtcacagggc
cctgcagtggtccaaggtcatgttcatccacctgcacccatgccttcaaccacaggacag
cagcagtttcagcgactgaaggttgaagatgccttgtcttatttggatcaagtaaaactg
cagtttgggaatcaacctcaagtttataatgacttccttgatatcatgaaagagttcaag
tcgcaaagcatagacactcctggagtcatcaaccgtgtgtctcagcttttcaagggccac
ccagacctcatcatgggttttaatactttcttgccacctggatacaagattgaagttcaa
accaacgatctagtcaatgtgaccacgccaaatcagatccactacatcacaccacacggt
gtttctgttcagaacatccctgcaagtggagcacccagccagcctgcccccagccaccac
cagcaccagagtctgccacagactggctcactcactaccaccacccaaccacttatccct
gcccagcctgctccaaataaaaccagcaagccaattcagtctccagcccatacacccacc
agccaacccaatccatctatcccatcttatgcttcaccacgctcgccttcagttcagtcc
cacactcctgtcagcagcacaccatccagtggaccgcctatccagaacaaccaacctgtg
gagttcaaccatgctataaattatgtcaacaagatcaaaaaccgcttccagggtcagcca
gacatctacaaagctttcctggaaatcctgcacacataccagaaggaacagcgaaatgct
aaagaagctggagggaactacaccccagcactgactgagcaggaggtttacactcaagtt
gcaagacttttcaagaaccaagaggacctgctctcagagttcggacagttcctgcctgat
gccaacagctcagcgctgctgagcaaaacaacaccagacagggccgagtcggtccgtaat
gatcatggtggcacagtaaagagacactttttgaacaacaaacagaggctgagccagaac
ggccttccaatcaggagaccctcaggcgtgggtaccacaccacctgtcaagaagaaacct
aaaataacggggaaggaccatggcatgagtgacgtgagcaaacacagcaccagcactgaa
acgatgttcttcgagaaggtgaagaaggctcttcgaagctctgaggcatatgacaacttc
ctacgctgcttgcacatcttcaaccaggaagtcatttcacgcactgagctggtccagtta
gttatcccatttcttggaaaattccccgagctttttacatggtttaaaaacttcttgggc
taccgagagtccagtcacggagagtcgagccatgcagagagtttacccaaggagcgtgct
acagagggcatcgccatggaaatcgactactcctcctgcaagaagctggggtccagctat
agagcgctgccaaagagcttccagcagcccaaatgcacaggaagaacacctctgtgcaga
gaggttttgaatgacacatgggtgtcatttccttcatggtctgaggactcgacatttgtg
agctccaagaagactcaatatgaggaacacatttacagatgtgaagatgagcgctttgag
ctggatattgtgttggagaccaaccttgccacaatccgagccctggagacagtgcaacga
cggctctctcgtatgtcagcagaggagcagctgcgcttcaagctggacaacacaatgggt
ggctcctcagaggtcattcaccgcaaagccatccagcggatatatggggacaaagctcaa
gacatcattgaaggactcaagaagaaccctgctgtgtccgtccccatagttctaaaaaga
ttaaaaatgaaggatgaggagtggagagaagcccaaaggggcttcaacaaaatctggcgg
gagcagaatgaaaagtattacctgaagtcactcgaccatcaaggcattaacttcaagcaa
aatgacaccaaagtattacgctcaaagaccttgctcaatgaaattgagatgttatatgat
gaacgccaggagcgggcatcagaggaatctgctacaccgccaccaaatggcccacacatg
actctgacctacgacgacagccagatcctcgaggatgctgcttccctcatcattcaccat
gtcaaaagacaggtcggcatccagaaagaagacaagtgcaagatcaaacagataatccac
cacttcatccccgacctgctgtttgcacagcgaggtgagctctctgatgtggaggaggag
gaagaagaggaagaagacacagagatggatcaagatggcagcaagaaacacaatggcctg
ccaggcagaagcccaaccaagtccaagctcctgttcagcaacacggcagctcagaagctc
cggggaaccgacgatgcctacaacttgttctacgtgaacaactactggtatgtcttcctt
cgccttcaccacatcctctgttctcgtttgctgcgaatttacgggcaagctgagaagcag
atcgaagaggattctcgcgaacgagagtgggaaagagaagtgttggggttcaaaagggag
aaaaacgaaaatccagccatccagctgaagatgaaggagccaatggatgttgatgtggag
gactactactcagtatttttggaaatggttcgtaatcttttggatggaaacatggagcct
gctcagtatgaggactccctgagggagatgtttactgtccatgcctacgttgccttcacc
atggataaactcatccaaagcattgtccggcagctccagcaccttgtcactgatgatgtg
tctgtgcgtgtgacggacctgtacctgagcgagagttccaataaagccacggggggcaca
ctgcccacacaggcatcgagggccaccgcagaggcgggataccagcgcaaagcagagcag
cttatgcccgatgagaactgcttcaagttgatgtttgtgaagaaccaagcctctgtcagt
ctggcagtagagctcctggatacagaagaggaaaactctgatgagcctgcagaggcagaa
aagtggtcagactacgtaggcaggtacctgaactcagattcctcatccccagagctgcgt
gagcatctggcccaaaagcccgtgttcctccccaggaatttgagacggataaggaagtgc
cagagaggatgggagcagctgcaacaggagagaatgaccaaaggctcctcggacaagtcg
caggacggcagcagcgagctgaagatggagtgcatgttcaagctgaactcctataagatg
gtttatgtctgcaagtcagaagattatatgtacaggcacacagcgctcacacgggctcat
cagtcccaccagcttgtgaacacacgtctgcacagacgctttcacgcctggctggatact
tgggccaaggagcacgtgaccagtgacatggctgctgacagccacaagtggttcatggga
gatggacaagaaggcctgttggcctgcaccaccacttgcagccctgaggtgctccattat
ctcaacattaacaagtaccgggtgaagtacaaaacaccgtaa
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