Oreochromis niloticus (Nile tilapia): 100694520
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Entry
100694520 CDS
T06104
Symbol
cdh17
Name
(RefSeq) cadherin-17 isoform X2
KO
K06811
cadherin 17, LI cadherin
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100694520 (cdh17)
Cell adhesion molecules [BR:
onl04515
]
Cadherins
Major cadherins
100694520 (cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
Cadherin_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
100694520
NCBI-ProteinID:
XP_003450982
Ensembl:
ENSONIG00000006061
LinkDB
All DBs
Position
LG11:complement(20011496..20027419)
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AA seq
871 aa
AA seq
DB search
MTPMVHLLLLPLLFSIAGGKDLEEKKGPFENTVLDVPEATPVPYPLYQFQVTDPHVNDFR
LSGEDVQDISISKDGWLYLEQPLDWSREKQFTIMVEALADEEVVEGPIDVTINVLDVNNK
APYFNQSVYTAVVRENTPAAVPFIRVFATDQDDPETPNARLRYSLVSEIPSIRDTKLFQI
NPDTGEISTTEQGQLLLKAREGIQYARGEDRSIETLKRKFDDYCSVHEVPYEQNPFFTCV
QRAEMRRQNLDPLEDPDYTLFVRVQDLEGASQNALSGNSRVQIAVQQNLWKNPGPIRIKE
NLEETYPLTIAKVQSNDPDARYVLVQKERELKFPFEITQNGEIMVTEKLDREIKERFILV
VLAKDENDNEVDPPMEIYVLVEDVNDNAPVCDEVTVFEFQENEPVGGLVGELLAHDRDKE
GTLNSILTYTILSQNPPTASETFSIDDASGTIRTLRLLRRREHAVYNLNVQVSDAVFSTN
CKVVVKVIDVNDELPKFEENDYGNETLAEDTPLGHTLLTIKATDNDDPDTGSSEIQFIIS
EGNTDDVFAVETDGKGVGYLVLAKPLDFETSPSYRLQIDARNPEPLMESLEYGSESTAFF
SVSVIDVDEAPKFSMDILDVTIYENITKGSVLLTVQAKDPEGKEIGYKLDGDTHGWLELD
AATGEIRTKETLDREKVDSFKVTVTAFEKANPEKSTERDLHVRLLDVNDNVPKLVESQAF
ICVKNPKPVLIKAEDSDSDPFSQPFTFSFGTKTGKSPNWELHQVDDTTAELKLKKPPSQD
KTFSLPITVKDKAGVGVPQAFEVKVCNCTELGYCYIAPEGLALGYGTGPTIGILAGILGF
CVIVFVVVIKRINKKSQRKAQAEEEERNAMM
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatggtgcatctgttgttgctcccgctgctgttcagcattgctggtgggaag
gatctggaggagaagaagggcccctttgagaacacagtcctggatgtgccagaggcgact
ccagtgccctatcctttgtatcagtttcaggtgacagatccacacgttaatgacttcagg
ctgagtggagaagatgtgcaagatattagtatttcaaaggatgggtggctttatctggaa
caacctctggactggtcgcgagagaagcagttcactatcatggtggaggcactggcagat
gaagaagtggtggagggcccgattgatgtgaccataaatgttttggatgtcaacaacaaa
gcaccgtacttcaaccagagtgtctacacagctgtggttcgggagaataccccagcagct
gtcccatttatccgagtgtttgcaacggatcaggatgacccggagactccaaacgctcgt
ctgagatacagcctggtcagcgagatccccagcatacgagacacaaagctgtttcagatc
aaccccgacactggagagatctccaccacagagcaagggcagctgctgctaaaggcaagg
gagggcatccagtatgccaggggagaagatcggagcattgaaactctgaagagaaagttc
gatgactactgttcggtgcacgaggtcccctacgaacagaaccccttcttcacctgtgtg
cagagagcagagatgagacggcagaacttggaccccctggaagacccagactacaccctg
tttgtgcgcgtgcaggacctggaaggagcttcgcagaatgctctaagtggaaacagcaga
gtccagattgctgtgcagcaaaacctgtggaagaatcccggacccatacgcattaaagaa
aacttagaggaaacatacccactaaccattgctaaggtccagtctaatgaccctgatgcc
agatacgtactggtccaaaaggagcgagagctgaaattcccctttgagatcacacaaaat
ggagaaataatggtgacagagaagctggacagagaaatcaaggagaggttcatcctggtg
gtgctcgcaaaggatgaaaatgacaacgaagtggatccaccgatggagatttacgtgttg
gtggaggatgtgaatgacaacgcacctgtgtgcgatgaggtgactgtgtttgagttccag
gagaatgagcctgtaggtggcctcgtaggagagctgctggctcatgatagggacaaagag
gggacactgaactctattttgacttacaccatcttgtcccaaaatccacccaccgcctcc
gaaaccttctccatcgatgatgcttctggaacaattcgtacactgcgcttgctgcggcga
agggaacatgcggtctacaacctcaatgtccaagtcagtgacgcagtcttcagcacgaat
tgtaaggtcgtcgtcaaggtcattgatgtcaacgacgagctgcccaagtttgaggagaat
gattacggcaatgagactctggcagaggacactcctctgggacacacacttctgaccatt
aaagcgacagataatgacgacccagacaccggcagctcggagatccagttcatcatctct
gaaggaaacaccgacgacgtctttgccgtggaaactgacggcaaaggtgttggttatctg
gttctggctaagcctctggactttgagacctctcccagttacaggctccagattgatgct
cgtaacccagagccactgatggaaagtctcgagtatggcagcgagtccaccgcctttttc
tctgtgtcggtcatcgatgtagacgaggctccaaagttcagcatggacatcctggatgtg
accatatatgaaaacatcaccaaaggatccgtgctgctcactgtgcaggcaaaggaccca
gagggcaaagagatcggatataagctggatggcgacactcatggctggctggagttggat
gctgccacaggagagatcaggaccaaagaaacactggacagagagaaggtggactcgttc
aaagtcactgtcactgccttcgagaaggccaacccggagaagtccactgagcgtgacctg
catgtaaggctgttggatgtgaacgacaacgtccccaaactggttgagagccaggccttc
atctgcgtgaagaatcccaaacctgttctcataaaggccgaagactcagacagcgaccct
ttctcccagccgttcactttcagctttggcaccaaaaccgggaaatctcccaactgggag
ctgcaccaagttgacgatacaacagctgaactgaaactgaagaaaccaccatctcaagat
aaaaccttctcacttcccattaccgttaaagacaaagcaggtgtaggagtcccacaggca
tttgaggtgaaagtatgtaactgcacagagctgggctactgctacatcgcaccagaagga
ttggcgctcggatatggaacgggacccaccattgggatcctggctggcattctgggattc
tgcgttattgtgttcgttgtagtgatcaaacgcatcaacaaaaagagccaaagaaaagcc
caggccgaggaggaggagaggaatgccatgatgtag
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