KEGG   Oreochromis niloticus (Nile tilapia): 100694544
Entry
100694544         CDS       T06104                                 
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100694544 (rbm22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:onl03041]
    100694544 (rbm22)
Spliceosome [BR:onl03041]
 Complex B
  Other components
   Prp19-related factors
    100694544 (rbm22)
 Complex C
    100694544 (rbm22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_occluded Nup35_RRM_2 zf-CCCH_2 RRM_3 zf-CCCH zf-CCCH_4 RRM_YTH1 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 100694544
NCBI-ProteinID: XP_003455262
Ensembl: ENSONIG00000013049
UniProt: I3K5L6
LinkDB
Position
LG2:25341163..25347045
AA seq 427 aa
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAETAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGVSEMGTRLDPVPGLPGALPPPPALDEEPPANYFNLDPSSSPAV
MNIGLPPPPGINPPPPGFGPPMFHHMGPMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGARHGD
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcgacttccctaggctccaacacttacaacagacagaactgggaagacgcggatttt
ccgattttgtgtcagacatgtttaggagaaaatccttacattcgtatgaccaaggaaaaa
tatgggaaagaatgcaagatctgtgctcggccctttaccgtgttccgatggtgtccagga
acacgtatgcgtttcaagaagacagaagtctgtcagacctgcagtaaaatgaaaaatgtt
tgtcagacatgtctgctggacctggagtatggtttgcctatccaagtccgagacactgga
ctctccgttaaagatgaggttcctcggtcagatgtgaataaagagtactacacacagaac
atggagagagagatagccaattccgatggcactcggccagtgggccagcttggtaaggct
ccaagttctagtgatatgttgctgaagttggctcggaccacaccatattacaagaggaac
cggccacacatctgctccttctgggtgaagggagagtgtaagagaggggaggaatgtccc
tacaggcacgagaagcccacagatcctgatgaccctctagcagaccaaaacataaaggat
cgttactatggcatcaatgacccagtggctgacaagttgctaaagcgggcttcaactatg
ccccgactggacccaccagaggacaaatccatcaccactctctacatcggggggttggga
gacactgttacagatggagacctcaagagtcacttctaccagtttggtgaaatccgaacc
attaccatagtccaaaggcagcagtgcgctttcatccagtttgccacgcggcagtcggct
gaaacggctgctgaaaagtccttcaacaaactcattattaacggacgaagactcaccgtc
aagtggggaaggtcccaggcagcaagaggaaaggagggaatcaaagatggtgtcagtgag
atgggtaccagacttgatcctgtgcctggactgcctggagctctgcccccaccgccagct
ctggatgaagagcctcctgccaactacttcaaccttgaccccagctcctctcctgctgtc
atgaacattggattacccccacctccaggcatcaatccacctcctccaggctttggccct
ccgatgtttcaccacatgggtcccatggccccgcctatgcctcctccaatgagcatgaga
cctccaggtcaaatccactacccttctcaggatcctcagcgcatgggtgcccatgctgca
cacggcgcacgtcatggcgattag

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