Oreochromis niloticus (Nile tilapia): 100694544
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Entry
100694544 CDS
T06104
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100694544 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100694544 (rbm22)
Spliceosome [BR:
onl03041
]
Complex B
Other components
Prp19-related factors
100694544 (rbm22)
Complex C
100694544 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
RRM_3
zf-CCCH
zf-CCCH_4
RRM_YTH1
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
100694544
NCBI-ProteinID:
XP_003455262
Ensembl:
ENSONIG00000013049
UniProt:
I3K5L6
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All DBs
Position
LG2:25341163..25347045
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AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAETAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGVSEMGTRLDPVPGLPGALPPPPALDEEPPANYFNLDPSSSPAV
MNIGLPPPPGINPPPPGFGPPMFHHMGPMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGARHGD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttccctaggctccaacacttacaacagacagaactgggaagacgcggatttt
ccgattttgtgtcagacatgtttaggagaaaatccttacattcgtatgaccaaggaaaaa
tatgggaaagaatgcaagatctgtgctcggccctttaccgtgttccgatggtgtccagga
acacgtatgcgtttcaagaagacagaagtctgtcagacctgcagtaaaatgaaaaatgtt
tgtcagacatgtctgctggacctggagtatggtttgcctatccaagtccgagacactgga
ctctccgttaaagatgaggttcctcggtcagatgtgaataaagagtactacacacagaac
atggagagagagatagccaattccgatggcactcggccagtgggccagcttggtaaggct
ccaagttctagtgatatgttgctgaagttggctcggaccacaccatattacaagaggaac
cggccacacatctgctccttctgggtgaagggagagtgtaagagaggggaggaatgtccc
tacaggcacgagaagcccacagatcctgatgaccctctagcagaccaaaacataaaggat
cgttactatggcatcaatgacccagtggctgacaagttgctaaagcgggcttcaactatg
ccccgactggacccaccagaggacaaatccatcaccactctctacatcggggggttggga
gacactgttacagatggagacctcaagagtcacttctaccagtttggtgaaatccgaacc
attaccatagtccaaaggcagcagtgcgctttcatccagtttgccacgcggcagtcggct
gaaacggctgctgaaaagtccttcaacaaactcattattaacggacgaagactcaccgtc
aagtggggaaggtcccaggcagcaagaggaaaggagggaatcaaagatggtgtcagtgag
atgggtaccagacttgatcctgtgcctggactgcctggagctctgcccccaccgccagct
ctggatgaagagcctcctgccaactacttcaaccttgaccccagctcctctcctgctgtc
atgaacattggattacccccacctccaggcatcaatccacctcctccaggctttggccct
ccgatgtttcaccacatgggtcccatggccccgcctatgcctcctccaatgagcatgaga
cctccaggtcaaatccactacccttctcaggatcctcagcgcatgggtgcccatgctgca
cacggcgcacgtcatggcgattag
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