Oreochromis niloticus (Nile tilapia): 100694570
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Entry
100694570 CDS
T06104
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100694570 (rnf40)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100694570 (rnf40)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
100694570 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
SpoIIE
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100694570
NCBI-ProteinID:
XP_013128448
Ensembl:
ENSONIG00000019949
UniProt:
I3KVH8
LinkDB
All DBs
Position
LG8:19413803..19428323
Genome browser
AA seq
1005 aa
AA seq
DB search
MSGAGGGKRPPGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEENVRILRKRIEPDPPV
VSTPAPPSATIPDQTPMEEDSVNLASPSGVPPPPVPEAQNEGERPEQQQEERQEERQEEE
QQQPPPPTGSDDLLTPSESQSDSKTDTSPPPPPLSENAKGFLSTLEQSSEEELTLHLQDR
MQFSKEAIACLVCVFDRLHSHISDMCKVVQAAGFEDDGQSDIINLNCTLLDENTRLRDLA
TLLQGRHHKMSMEYNELVDKVTSSETKVTEMETTVEDLQWDIEKLRNREQKLNKHLAEAM
EQLKSGYSSTGSSGGLAGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQEAV
RESEKLKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHL
RQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMR
HLISSLQNHNLQLKGDVQRYKRKLRETQLEINKLRCQSGDTGVLILEETTSDSIDVKKEE
DDDQEEEEERRRELERQRAREREREREREAERERERERERERQRSDELKRKDSDTLKMLR
VELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERK
ESKKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLL
QQLREKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLAFKTQVDAQLLVVQKLEEKEG
VLQSTLAALEKELAVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRT
ARERESSNLKRAQEDLSRLRRKLEKQKKVEMYSDADEILQEEINQYKAKLRCPCCNTRDK
ETVLTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgctgggggaggaaagcgtcccccaggcggggacagcccccctggcccacct
gaaaagaaaagcaagaaagaagagaagaccaccaccacgctaattgagccaatacgcata
gctggagtctcctctacggaggaaatggacatgaaggttctccagttcaagaataagaag
ctatgtgaacgcttggagcagagacaggcgatggaggatgagctgagagagaaaattgag
aagctggagaagagacaagccactgatgacactaccttgctgattgttaatcgctactgg
tcacagttggaagagaacgtgcgcattctgcgtaaacgtattgagccagatcctccagtc
gtttctacccctgccccaccctcagcaaccatccctgaccaaacaccaatggaggaagat
agtgtcaacctggcttcgccttctggcgtgcctccccctcctgtgccagaggcccagaac
gagggtgagcggccagagcagcaacaggaggagcgtcaggaagagcgtcaggaagaggag
cagcagcagccccctcctcccactgggtcagatgatttactgacaccatcagagtcacaa
tcggattcaaaaacagatacatcaccgccacctcctcccctgagtgaaaatgccaagggt
ttcttgtcgactctggagcagagcagcgaggaggaactaactctgcacctccaggaccgc
atgcagttcagcaaagaagccatcgcctgcttggtctgcgtctttgataggctgcacagt
cacatcagtgacatgtgcaaggtggtccaagctgcaggatttgaagatgacggccagtct
gacatcatcaatctgaactgcactctgctggacgagaacactcgactgcgagacttagcc
actctcctgcaggggagacaccataagatgtccatggagtataatgagcttgtggacaag
gtgaccagctcagagaccaaggtgactgagatggagacaacggtggaggacctgcagtgg
gacattgagaaactgcgcaatagggaacaaaagcttaacaaacatctagcagaggccatg
gagcagctaaagtcaggatacagcagcactggcagctcaggtgggctggctggaggccag
attacactgaatattcaaaagtttgagagtctcaatgcagagctggagcacaaccaggag
ctggcaaatagccgcatggcagaattggagaaactacaggtggagctccaggaggctgtg
agggagagtgagaagctcaagatggacctgcgtaatattccagaggaggttgtgaaggaa
acgttggagtacaaatgtctgcagtctcagttctccctcctgtacaacgagtctctagga
gtgaaaacccagctggatgaggcacgggctctcctgctcactgcgaagaacgcccatctc
cgacagattgagcacatggagagtgatgagctgtctcttcagaagaagctgcggactgag
gtcatccagctggaggatactctggcccaggtgcgcaaagaatatgagatgctgcgtatt
gaatttgagcagaacctggcagccaacgagcaagcaggaccaatcaacagggagatgcga
cacttgatcagcagcctccagaaccacaacctgcagttgaaaggcgacgtgcagcgctac
aagaggaaattgcgggaaacgcagctggagatcaacaagttacgctgtcagagtggcgac
actggagttctgattttggaggagacgacgagcgacagcattgacgtgaaaaaggaggag
gatgacgaccaggaggaagaagaggagaggaggagggagctggagagacagcgagcccga
gagagggagcgggagagggagagggaggccgagcgagaacgagagagggagcgggaaaga
gagaggcagcgcagcgacgagctgaagaggaaagactcagacacactgaagatgctcaga
gtagaactcaagaaagcccaagagtcccagaaagagatgaagcttctgctggacatgtat
aagtcagcgccaaaggagcaaagagataaagtgcagctgatggcggccgaacgcaagtct
aaagctgaggtggatgagctgaggatgcgagtacgagagctcgaggagagggagaggaag
gagagcaaaaaactggctgatgaagacgccctcaggaaaatacgagtggcagaagagacc
attgagcacctgcagaagaaactcgctgccactaaacaggaggaggaagccctgttgagt
gagatggatgtaacaggccaggcctttgaagacatgcaggagcagaacagccggctgttg
cagcagttgcgcgaaaaggacgatgccaattttaagctgatgagcgagcgaattaaatct
aaccagatctacaagctgctgaaagaggagaaggaggagctggctgaccaagttcttgca
ttcaaaacccaggtggatgcccagctgctggttgtgcagaaattggaagaaaaagaggga
gtcctacagagcaccctggcagctctggaaaaggaactggctgtcagaacacaagcacta
gagctgaacaagaggaaggcagtggaggccgcacagctggcagaggacctgaaggtgcag
ctggagcacacgcaggccaagctgaaggagatccaagtctctgtggctgagaaccgcact
gcccgggagagggagagcagcaacctgaagcgagcacaggaggatctgtccaggctcaga
aggaagctggagaaacagaagaaggtggagatgtactcggatgcagacgagattctgcag
gaggagatcaatcagtacaaggccaagctgcgttgcccctgttgtaacacccgagacaag
gagacggtgctcaccaagtgtttccacgttttctgctacgaatgtctgaagatgcgttac
gacacccgacagaggaagtgccccaagtgcaactgtgcattcggagccaacgacttccac
cgcatctacatcacttaa
DBGET
integrated database retrieval system
