Oreochromis niloticus (Nile tilapia): 100694771
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Entry
100694771 CDS
T06104
Symbol
clcf1
Name
(RefSeq) cardiotrophin-like cytokine factor 1 isoform X2
KO
K05421
cardiotrophin-like cytokine factor 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100694771 (clcf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
onl04052
]
100694771 (clcf1)
Cytokines and neuropeptides [BR:
onl04052
]
Cytokines
CSF and other factors
100694771 (clcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNTF
PRF
Motif
Other DBs
NCBI-GeneID:
100694771
NCBI-ProteinID:
XP_003444750
Ensembl:
ENSONIG00000027316
UniProt:
A0A669EU70
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Position
LG2:22489419..22507986
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AA seq
506 aa
AA seq
DB search
MRRFCGVDQHQLVLLLAAAMATAVDALHSLASERSSIQSTYELTKYLEFQLKEIKDVYLT
YLGPPFNDKDFSPPRPNSTALTLPSAATRVDQWHRLENKARLAQNQKAYSVLLGAVRELA
RSTLCPSLKTSLLHFCMGLDGLLGSISALMTVLGDTNPTQTPNIRGNAGELQYLETGTGG
GRPAPLMSQNLYRSRAGSRSVSGQRSGQRRSGAKLVRGVQEDGVTKELTEKRRGKEARRA
EAGRGRSSGLRERVRGERRRREKREEPERGNWAASAKKAAGKEEEERWVRSRRLLSITED
GEEQERQFEPRVEVSYVDTKGLGSLQQQTENQQGTNKHQYSYNLNAHHPDTLRAEDGFIL
EGSRESEVEEDKQAYTGATSSSSSGYLKQRRSPRSLLSPTLEPPLSTLSLLYQFGAGEEH
TLLPQPVPLSLQRGTSLLSPPLNPLFTSSSSTSASSSSPSSSLLPARPTMNDFTRKVEGF
WILRELQSWLWRSAKDFNCLKKKLRG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaggagattctgcggagtcgatcagcaccagctcgtcttgctattggccgctgccatg
gccaccgccgtggatgctctccacagcctggccagcgagaggagttcgatacagagcacc
tatgagctcaccaagtacctggagtttcagctgaaagagatcaaagacgtatatctgacc
tatcttggccctccatttaatgacaaagacttctcccctccgaggcccaacagcacggct
ctgacactgccgagtgctgccactcgagtggaccagtggcatcgcctggagaacaaagca
cgactggcccagaaccaaaaggcctactctgtccttctgggagctgtcagggagctggcc
cgctcgaccctctgcccctcactcaagacctccctgctgcacttctgcatgggtctggat
ggacttctgggttcaatatctgcactgatgactgtgcttggtgacacaaatcctacacaa
actccaaacattagaggtaatgctggtgagctgcagtatttggagacggggacaggaggt
ggccgaccagctccgctcatgagccagaacttgtacagatcaagagccggatctagatcg
gtgtctggtcagcgtagtggccaaagaagaagtggggcaaagttagtcagaggagttcag
gaagatggtgtcactaaggagctgacagaaaaaaggagaggaaaagaggcaaggagagca
gaggcaggcagaggaaggagtagcggattgagggagagagtaaggggagaaagacggaga
agagagaagagggaagagccagagagaggaaattgggcagccagtgcaaaaaaagcagca
gggaaggaggaagaggagagatgggtgaggagcagaaggctgttaagtatcactgaggat
ggagaggaacaggagaggcagttcgaacccagggttgaagtgtcatatgtggacacaaaa
ggcttaggctcccttcaacaacaaacagaaaaccaacaaggaaccaacaagcatcaatac
agctacaacctgaacgcacatcacccagacacgctcagagcggaggacggattcattcta
gaggggagcagagagtcagaggtggaggaggacaagcaagcatacacaggtgctacctcc
tcttcctccagtggatatctgaagcagcgtcggtctcctcgctccctgctctccccgacc
ctcgagcctcctctgtccacactctccctcctctaccaattcggagcaggcgaggagcac
accctcctcccccagcctgtccctctatctttacaaaggggcacctccctactctcgcct
cccttgaatccgctcttcacctcctcctcctccacctccgcctcctcttcctctccctca
tcttccctgctgccggcgcggccgacaatgaacgactttaccaggaaggtggagggtttc
tggatactgcgagagcttcagagctggctgtggcgatcggcgaaggactttaactgcctc
aagaagaagctccgaggctga
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