Oreochromis niloticus (Nile tilapia): 100694796
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Entry
100694796 CDS
T06104
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X2
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100694796 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100694796 (gtf2f1)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100694796 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
100694796
NCBI-ProteinID:
XP_005457751
Ensembl:
ENSONIG00000002060
LinkDB
All DBs
Position
LG4:complement(16033376..16050446)
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AA seq
532 aa
AA seq
DB search
MTSLGSSSSTSATEYTVRVPKNTSKKYNIMAFNAGDRVNCSTWTQARMERDMSARKIYGE
EETPEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGIKKGGVT
ENASYYIFTQCPDGAFEAFPVHGWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQ
RRLREQERGEEDEDEGEKSGKKKKKGGGRGGDLRIHDLEDDLEMSSDNSDSSMGEDGESK
PKVKKDAGKGKAKKKKQKSKDNEALEDSDDGDYEGLEVDYMSDESSSEEEPEKGKPVKAE
EHPKGIDEESESEEESEEEKQNDEEAKEEEEEEEGKKTPVQVEKKKKKDSSGESDSSDDS
DIEGETASALFMAKKRTPPKRAGGRGSAGSSRTGSRPGTPSLDSASTSNTLRAAASKLEQ
GKRQGPSIDSPAAKKLKMEPSTQSPVPSGKSTPQPQSGKSTPSSSDVQLTEEAVRRYLIR
KPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNINDKMHFYLTE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacatcactgggaagcagcagcagcacctcagccacagaatacaccgtgcgtgtcccc
aaaaacaccagcaagaagtacaatataatggcattcaatgcaggggacagagtcaactgt
tcaacatggacacaggctcgtatggaaagagatatgagtgctcggaagatatatggggag
gaagagacccctgaaggcgcagcaggtagtgagtttggcaaaaagcagcgtgaggaagct
cgtcggaagaagtttggtatcgtcacgcgtgaattcaaagtggaggaccagccctggatt
ctcaaggttaatggtaaagctggcaagaggttcaaaggtataaagaagggtggcgttaca
gaaaatgcatcctactacatcttcacgcagtgtcccgatggagctttcgaggcttttcct
gttcacggctggtacaactttacaccgcaggccaaacaccgaactctgactgctgaggag
gctgaggaggagtggggcaggcggaacaaggtggtgaatcactttagcatcatgcttcag
agacgtcttcgagagcaggagcgaggtgaggaagacgaagacgaaggagaaaaatctggg
aagaagaaaaagaaggggggtggaagagggggtgacctgcgcattcatgacctggaggac
gacctggagatgagtagtgataacagtgacagcagtatgggggaagatggagagagcaag
ccaaaggtaaaaaaagatgctgggaaaggaaaagcaaagaaaaagaagcaaaaaagcaaa
gacaacgaggctctggaagacagcgatgacggagactacgagggcctagaagtggattat
atgtcagatgaaagcagctcagaagaagaaccagaaaagggaaagcctgtcaaagcagag
gaacaccctaaagggattgatgaagaatctgaaagtgaggaagagagtgaggaggagaaa
cagaatgatgaggaagcaaaagaggaggaagaggaggaggaagggaagaaaaccccagtt
caagtggagaagaagaagaaaaaagacagcagtggagaatcagacagctcagatgacagt
gacatcgaaggagagacggcctctgctctgttcatggcgaagaaacgcacacctcctaaa
cgtgcaggtggccgcggctctgcaggcagctccaggactggcagccgtcctggaactcca
tccttagactctgcctccacctcgaacacactccgtgctgccgccagcaagctggagcaa
ggtaagagacagggtcctagcatcgactcacctgctgccaaaaagcttaagatggagccc
agcacccaaagccccgttccctctgggaagagcacacctcaaccccaatcaggcaaatcc
accccgagctcaagtgatgtgcagctgacagaggaagcagtccgccgctacctgatccgt
aaaccaatgaccactaaagacttgttgaagaagttccagactaagcgcaccggcttgagc
agtgagcagactgtcaacgtgctggcacagatccttaagcgcctcaatccagagcgcaag
aacataaacgacaaaatgcacttctacctcaccgaataa
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