Oreochromis niloticus (Nile tilapia): 100694804
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Entry
100694804 CDS
T06104
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
onl04514
Cell adhesion molecule (CAM) interaction
onl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
100694804
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100694804
04517 IgSF CAM signaling
100694804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100694804
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100694804
04090 CD molecules [BR:
onl04090
]
100694804
00536 Glycosaminoglycan binding proteins [BR:
onl00536
]
100694804
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
onl00537
]
100694804
04091 Lectins [BR:
onl04091
]
100694804
Membrane trafficking [BR:
onl04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
100694804
Cell adhesion molecules [BR:
onl04515
]
Immunoglobulin superfamily
NCAM1/2
100694804
CD molecules [BR:
onl04090
]
Proteins
100694804
Glycosaminoglycan binding proteins [BR:
onl00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
100694804
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
onl00537
]
Others
100694804
Lectins [BR:
onl04091
]
I-type lectins (Siglecs)
100694804
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Ig_PDGFR_d4
C2-set_2
Pur_ac_phosph_N
Fn3_ROS1
C2-set_3
DUF4690
Motif
Other DBs
NCBI-GeneID:
100694804
NCBI-ProteinID:
XP_005458524
Ensembl:
ENSONIG00000009496
LinkDB
All DBs
Position
LG10:complement(24794419..25048448)
Genome browser
AA seq
1027 aa
AA seq
DB search
MLQIRDLIWGLLFIGCAAAIQVQITPPQGEISVGDSKFFICEVVGDAKDIDWYAPSGEKI
LPSGEKILPNRAVSRIDEATSTLTIYHATVDSAGIYKCVAKDGDKEAQATVQVKIFQKIT
FESAPNPQEFIEGDDADIVCDVVSSPPPTIIWKHKGSKIQPAKDVRFKIMDNGHLQIRSI
KKTDEGTYTCEARVMARGEIDFKTMKVIVNVLPTIRVRHPGVNATADVGKSALLACDADG
FPEPTVTWAHNGVVLEDSDKYNLNEDGSELLIKHVTKVDEGDYTCIAKNKAGEKTEEVSL
SVFVQPNITYLSNQTASEFDDQVILTCQASGDPTPTISWSFGNKVFTEGEQASWTRPDTY
ESLDRNVVVRSHARVSSLTLKNVQFTYAGQYLCTASNSIGQDARHMYLEVRYTPKILGSV
TVYTWEGNPANISCEVEAHPGASVVWFRDGFQLPTANSTNMKIYNTPSVSYLEITPDSQN
DFGSYNCTATNVMGSESKEFLLIQAEVPSSPVIQQVEPFSSTAVVKFEEPDSMGGVPIIK
YRVEWRLPGQDWTGKEEDVEDDMTGITITNLKPETTYEVRMSAINGKGEGESSQASTFKT
EPVRYSVTISSEIPPPIAATSMARKGEPSAPKLQAKVHSPGNSLKINWITQDNGGSKIKH
YLIRYKAKRVSDWKPELRLPSDSTYILLNSLEWNTEYEVHVVAENEQGKSKPGILAFKTD
TEPTTVPDAMDGGSGMGTGAIVGILIVVFFLLLVGVDVTCYFLNKCGLLMCIAVNFCGKA
GPGAKSKDIEEGKAAFTKDECKEPIVEVRTEEENTPNQEGGGATEPNETTPLTEPEPAAA
DTTPMVVNLLSSTAANSVTESFSMAQSSPASERTTLTTNTSSPTQVAHAKSHPKNSPTAN
SLKANPQPDVGPLVDLSDTPKVAASSDPTPLVSELVSPPSANADGPQSQRDSVKAPDSTQ
SKDSQVDGPTKDVPNAPCTDSTTPAQNDGKTVKDDNTKGEAEVKNATAEVKTVPNEAPQM
NGNESKA
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaataagggacctcatctggggattgttattcatcggctgtgcagctgccatt
caggtgcaaattactccaccacaaggggagatcagcgtaggagattccaaatttttcatc
tgcgaagtggtaggagatgctaaagacatagactggtacgctcccagcggtgagaagatc
cttcccagcggtgagaagatccttcccaacagggcagtgagccgcattgatgaagccacg
tcgactctcaccatataccacgccaccgtggacagtgctggcatctacaagtgtgtggca
aaggatggagacaaggaagcccaggccactgtccaagtaaagatcttccaaaagatcacc
ttcgagagtgctcccaacccgcaggagttcatcgagggtgatgatgctgacatagtctgt
gatgttgtcagttcaccaccacccactattatttggaagcacaagggctccaagatccaa
cctgccaaagatgttcgatttaagatcatggataatggccatctgcagatccgcagcatt
aaaaagacagatgagggcacatacacttgtgaggctcgtgtcatggccaggggagaaatt
gacttcaagactatgaaggtcattgttaacgtgcttcccaccatccgtgtcaggcaccca
ggagtcaacgctacagcagacgttggtaaatcagctttactggcttgtgatgcagatggc
ttcccggaacccaccgttacttgggcacataacggtgttgtccttgaagacagcgataag
tacaacctcaatgaggatggttcagaattgttaataaaacatgtcaccaaagtggatgaa
ggagattacacgtgcatcgccaagaacaaggcgggagagaaaacggaggaagtcagccta
agcgtgtttgtccaacccaacattacctacttgagtaaccaaactgcttcggagtttgat
gatcaagtcatcctgacatgtcaggcttccggtgacccaacacctacaatttcctggagt
tttggaaacaaggtcttcactgaaggagaacaggcctcttggactcgaccagacacatac
gagagccttgatagaaatgtggtggtgcgcagtcatgcgcgggtgtcctctctcaccttg
aaaaatgtccagttcacatatgccggacagtacctctgcaccgccagcaactccatcggc
caggacgcccgacacatgtacctggaagtccgctatactccaaagatcctgggttcggtg
acagtatatacatgggagggaaacccggccaacatcagttgtgaggtggaggctcatccc
ggagcctcggtggtttggttcagagacggcttccagctgcccactgccaacagcactaat
atgaagatctataacacaccatccgtcagctaccttgagattacccctgattctcaaaac
gactttggcagttacaactgcacagcgaccaatgtgatgggttctgaatccaaggaattc
cttcttatccaagcagaggtgccgtcatcgcctgtaattcaacaagtggagcctttctca
agcacagcagtggtaaagtttgaggagcctgattcaatgggtggagtgcctattatcaag
tatagagtggaatggcgtttgcctggccaggactggactggcaaggaggaagatgttgag
gatgacatgaccgggatcaccatcactaatttgaaaccagaaactacatatgaggtcagg
atgtccgccatcaatgggaaaggtgaaggcgagagcagccaggccagcactttcaagact
gagccagtccggtattctgtcacaatttcatcagagataccaccccctattgctgccacc
agtatggcccgtaaaggggaacccagtgctcccaaactgcaggccaaggtgcacagcccg
ggcaattctcttaagatcaactggatcacgcaagataacggtggttccaagattaaacat
tacctgatcagatacaaggctaagcgtgtatctgactggaaaccagagctccgccttccc
agtgacagtacctatatcctcctgaacagcctggaatggaacacagagtatgaggttcat
gtggtggcagagaatgagcagggcaaatctaagcccggcatcctcgccttcaaaacagat
acagagcccacaactgtcccagacgccatggatggtggctcaggcatgggcaccggggcc
atcgtaggcatccttattgttgtctttttcctgctgctggtgggcgtggatgtcacctgc
tatttcctcaacaagtgcgggctcctcatgtgtattgctgttaacttctgtgggaaagct
ggcccaggcgcaaagagcaaggacatcgaggagggcaaggcggcattcaccaaagatgag
tgtaaggagcctattgtcgaagtgagaacagaggaagaaaacactccaaaccaagaagga
ggaggtgccaccgagcccaacgagaccacgccattgacagaacctgagcctgctgctgca
gacaccaccccgatggtggtaaatctgctgtcctccacagctgctaactcagttactgag
agctttagcatggcgcaaagcagtcctgctagtgagagaaccacactaacaaccaacacc
tccagtccaacccaagtggcccatgccaagtctcaccctaaaaacagccctacagccaat
tcgcttaaagctaacccccaacctgatgttggacctctggttgacctgagcgacacccct
aaagttgccgcatcttccgacccaacaccccttgtatcagagctagtcagcccaccctct
gctaatgctgatgggccacagagtcagcgggactcagtcaaagcccctgacagcacccag
agtaaggactcacaagtagacggcccaaccaaggacgttcctaatgccccgtgcacagac
tcgaccacaccagcccaaaatgatggtaagactgtgaaggatgataacacgaaaggcgag
gcggaggtgaagaatgccacagctgaagtgaagacagttcccaacgaggctcctcagatg
aatggcaacgaaagtaaagcgtaa
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