Oreochromis niloticus (Nile tilapia): 100694821
Help
Entry
100694821 CDS
T06104
Name
(RefSeq) TATA box-binding protein-like protein 2 isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100694821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100694821
03021 Transcription machinery [BR:
onl03021
]
100694821
Transcription factors [BR:
onl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
100694821
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100694821
RNA polymerase III system
TFIIIB
100694821
RNA polymerase I system
SL1/TIF-1B
100694821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
100694821
NCBI-ProteinID:
XP_005461976
Ensembl:
ENSONIG00000011742
LinkDB
All DBs
Position
LG19:complement(29870981..29878319)
Genome browser
AA seq
350 aa
AA seq
DB search
MDESALERYFEDSIANDSSFMLVEGLSLQSPALISQDPAYPSEKPGASGEAGDELDLSFL
PDELSTQEEPSHDISGEEGGSAALDMSQDSGVGVDYNSQESTTAEGTQEMSTSGAGTRAS
PFYPMTPMTPMTPMTPVTERSGIIPQLQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFA
AVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLEFKIQNM
VASCDVCFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGNRLH
TSEFISTDTNRSLNTGTDLSPDYRQNCSSNEIIMKSVVQHSSANGPFIYK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcggcgttggagcgttactttgaagactccattgcaaacgactccagcttt
atgctggtggaggggcttagtcttcaaagccctgccctcatttcacaggaccccgcctac
ccgtcagagaagcctggagcaagcggtgaggccggtgacgagcttgacctcagtttcctt
cccgacgagctcagcacgcaggaggaaccgagccatgacatatcaggagaggaaggcggg
tctgcagctctggacatgtctcaggacagcggcgttggtgtggactacaactcccaggaa
tccacgaccgccgagggcacacaggagatgtccacatcaggagcggggaccagggcctcc
cccttctatcccatgacccccatgacccctatgacccccatgacccctgtgacagagagg
tcaggaatcatcccgcagctacagaacatcgtctccacggtgaacctgggctgtccgctg
gatctgaagttcatcgccctgcaggcccgaaacgccgagtacaacccaaagcgcttcgcg
gcggtcatcatgaggatccgtgagccgcgaacaacagctctgatcttcagctctgggaag
atggtgtgcacaggagccaagagtgaggagcagtcgcgcctggcggcccggaaatacgcc
cgggtggtgcagaaactcggtttccccgcccgcttcctggagttcaagatccagaacatg
gtggccagctgtgacgtgtgcttccccatcagactggaaggactggttctgacccaccag
cagttcagcagttacgagccggagctgtttccgggacttatctaccggatggtgaagcct
cgaattgtcctgctcatctttgtgtcggggaaggtggttctgacgggtaatcgcctccac
acgtccgagttcatcagcacagacacaaacagaagcctcaacacggggactgatctgtca
ccagattacagacaaaactgttcttcaaatgaaatcattatgaagtctgtcgttcaacac
agctctgcaaacgggcctttcatttacaaatga
DBGET
integrated database retrieval system
